RNA–Protein interactions for RNA: ENST00000591515.6

LSM7-206, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM7, Length 710 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM7-206	ENST00000591515	TBC1D16	Q8TBP0	767 aa		29.29	■■■□□ 2.28
LSM7-206	ENST00000591515	DNAAF4	Q8WXU2	420 aa		29.29	■■■□□ 2.28
LSM7-206	ENST00000591515	KIF16B	Q96L93	1317 aa		29.28	■■■□□ 2.28
LSM7-206	ENST00000591515	RARS	P54136	660 aa	Known RBP	29.28	■■■□□ 2.28
LSM7-206	ENST00000591515	FAM89A	Q96GI7	184 aa		29.28	■■■□□ 2.28
LSM7-206	ENST00000591515	ZNF609	O15014	1411 aa		29.28	■■■□□ 2.28
LSM7-206	ENST00000591515	HSP90B1	P14625	803 aa	Known RBP	29.27	■■■□□ 2.28
LSM7-206	ENST00000591515	CCDC191	Q8NCU4	936 aa		29.27	■■■□□ 2.28
LSM7-206	ENST00000591515	ATP5J2-PTCD1	G3V325	749 aa		29.26	■■■□□ 2.27
LSM7-206	ENST00000591515	ANGEL2	Q5VTE6	544 aa	Known RBP	29.26	■■■□□ 2.27
LSM7-206	ENST00000591515	CWC25	Q9NXE8	425 aa	Predicted RBP	29.25	■■■□□ 2.27
LSM7-206	ENST00000591515	ZNF280A	P59817	542 aa	Predicted RBP	29.24	■■■□□ 2.27
LSM7-206	ENST00000591515	SCARF1	Q14162	830 aa		29.24	■■■□□ 2.27
LSM7-206	ENST00000591515	IPO8	O15397	1037 aa	Known RBP	29.23	■■■□□ 2.27
LSM7-206	ENST00000591515	FKBP1B	P68106	108 aa		29.23	■■■□□ 2.27
LSM7-206	ENST00000591515	PKN2	Q16513	984 aa	Known RBP	29.23	■■■□□ 2.27
LSM7-206	ENST00000591515	LINS1	Q8NG48	757 aa		29.23	■■■□□ 2.27
LSM7-206	ENST00000591515	ZNF296	Q8WUU4	475 aa	Predicted RBP	29.23	■■■□□ 2.27
LSM7-206	ENST00000591515	API5	Q9BZZ5	524 aa	Known RBP	29.23	■■■□□ 2.27
LSM7-206	ENST00000591515	ZC3H12C	Q9C0D7	883 aa	Known RBP	29.23	■■■□□ 2.27
LSM7-206	ENST00000591515	ZNF646	O15015	1829 aa	Predicted RBP	29.22	■■■□□ 2.27
LSM7-206	ENST00000591515	RTL5	Q5HYW3	569 aa	Predicted RBP	29.22	■■■□□ 2.27
LSM7-206	ENST00000591515	MOB2	Q70IA6	237 aa		29.22	■■■□□ 2.27
LSM7-206	ENST00000591515	HDAC9	Q9UKV0	1011 aa		29.22	■■■□□ 2.27
LSM7-206	ENST00000591515	TBC1D8	O95759	1140 aa		29.21	■■■□□ 2.27
LSM7-206	ENST00000591515	RPS8	P62241	208 aa	Known RBP	29.21	■■■□□ 2.27
LSM7-206	ENST00000591515	PODXL2	Q9NZ53	605 aa		29.21	■■■□□ 2.27
LSM7-206	ENST00000591515	RSBN1L	Q6PCB5	846 aa	Predicted RBP	29.2	■■■□□ 2.26
LSM7-206	ENST00000591515	UFL1	O94874	794 aa		29.19	■■■□□ 2.26
LSM7-206	ENST00000591515	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	29.19	■■■□□ 2.26
LSM7-206	ENST00000591515	AGBL3	Q8NEM8	1001 aa		29.19	■■■□□ 2.26
LSM7-206	ENST00000591515	ARHGAP45	Q92619	1136 aa		29.19	■■■□□ 2.26
LSM7-206	ENST00000591515	NEURL1B	A8MQ27	555 aa		29.18	■■■□□ 2.26
LSM7-206	ENST00000591515		F6X3S4	739 aa		29.18	■■■□□ 2.26
LSM7-206	ENST00000591515	IRS4	O14654	1257 aa	Predicted RBP	29.18	■■■□□ 2.26
LSM7-206	ENST00000591515	SLC4A10	Q6U841	1118 aa		29.18	■■■□□ 2.26
LSM7-206	ENST00000591515	NOB1	Q9ULX3	412 aa	Known RBP	29.18	■■■□□ 2.26
LSM7-206	ENST00000591515	SCAF8	Q9UPN6	1271 aa	Known RBP	29.18	■■■□□ 2.26
LSM7-206	ENST00000591515	PITPNM2	Q9BZ72	1349 aa		29.18	■■■□□ 2.26
LSM7-206	ENST00000591515	PCCA	P05165	728 aa	Predicted RBP	29.17	■■■□□ 2.26
LSM7-206	ENST00000591515	GML	Q99445	158 aa		29.17	■■■□□ 2.26
LSM7-206	ENST00000591515	SRCIN1	Q9C0H9	1055 aa		29.17	■■■□□ 2.26
LSM7-206	ENST00000591515	SEC31B	Q9NQW1	1179 aa		29.17	■■■□□ 2.26
LSM7-206	ENST00000591515		G3V3G9	751 aa		29.16	■■■□□ 2.26
LSM7-206	ENST00000591515	UBE2Q2L	H0YL09	131 aa		29.16	■■■□□ 2.26
LSM7-206	ENST00000591515	ALDH1L1	O75891	902 aa		29.16	■■■□□ 2.26
LSM7-206	ENST00000591515	IGKV5-2	P06315	115 aa		29.16	■■■□□ 2.26
LSM7-206	ENST00000591515	DCAF8	Q5TAQ9	597 aa		29.16	■■■□□ 2.26
LSM7-206	ENST00000591515	MYOZ2	Q9NPC6	264 aa		29.16	■■■□□ 2.26
LSM7-206	ENST00000591515	GGA1	Q9UJY5	639 aa		29.16	■■■□□ 2.26
LSM7-206	ENST00000591515	BEND3	Q5T5X7	828 aa		29.15	■■■□□ 2.26
LSM7-206	ENST00000591515	ANKIB1	Q9P2G1	1089 aa		29.15	■■■□□ 2.26
LSM7-206	ENST00000591515	GPR25	O00155	361 aa		29.14	■■■□□ 2.26
LSM7-206	ENST00000591515	USP17L8	P0C7I0	530 aa		29.14	■■■□□ 2.26
LSM7-206	ENST00000591515	CWF19L2	Q2TBE0	894 aa	Known RBP	29.14	■■■□□ 2.26
LSM7-206	ENST00000591515	FBXO46	Q6PJ61	603 aa	Predicted RBP	29.14	■■■□□ 2.26
LSM7-206	ENST00000591515	SPEF2	Q9C093	1822 aa		29.14	■■■□□ 2.26
LSM7-206	ENST00000591515	GCKR	Q14397	625 aa		29.13	■■■□□ 2.25
LSM7-206	ENST00000591515	NOM1	Q5C9Z4	860 aa	Known RBP	29.13	■■■□□ 2.25
LSM7-206	ENST00000591515	FRAT1	Q92837	279 aa	Predicted RBP	29.13	■■■□□ 2.25
LSM7-206	ENST00000591515	BCAR3	O75815	825 aa		29.12	■■■□□ 2.25
LSM7-206	ENST00000591515	TM4SF4	P48230	202 aa		29.12	■■■□□ 2.25
LSM7-206	ENST00000591515	PRAMEF18	Q5VWM3	479 aa		29.12	■■■□□ 2.25
LSM7-206	ENST00000591515	MKI67	P46013	3256 aa	Known RBP	29.11	■■■□□ 2.25
LSM7-206	ENST00000591515	CCT4	P50991	539 aa	Known RBP	29.11	■■■□□ 2.25
LSM7-206	ENST00000591515	ZKSCAN2	Q63HK3	967 aa		29.11	■■■□□ 2.25
LSM7-206	ENST00000591515	RCAN3	Q9UKA8	241 aa		29.11	■■■□□ 2.25
LSM7-206	ENST00000591515	C9orf78	Q9NZ63	289 aa	Predicted RBP	29.1	■■■□□ 2.25
LSM7-206	ENST00000591515	MKRN3	Q13064	507 aa	Known RBP	29.09	■■■□□ 2.25
LSM7-206	ENST00000591515	ATF7IP	Q6VMQ6	1270 aa		29.09	■■■□□ 2.25
LSM7-206	ENST00000591515	HTT	P42858	3142 aa		29.09	■■■□□ 2.25
LSM7-206	ENST00000591515	RBBP6	Q7Z6E9	1792 aa	Known RBP	29.08	■■■□□ 2.25
LSM7-206	ENST00000591515	NBPF9	Q3BBW0	867 aa		29.08	■■■□□ 2.25
LSM7-206	ENST00000591515	R3HDML	Q9H3Y0	253 aa		29.08	■■■□□ 2.25
LSM7-206	ENST00000591515	USP17L3	A6NCW0	530 aa		29.07	■■■□□ 2.24
LSM7-206	ENST00000591515	USP17L4	A6NCW7	530 aa		29.07	■■■□□ 2.24
LSM7-206	ENST00000591515		H7C1W4	665 aa		29.07	■■■□□ 2.24
LSM7-206	ENST00000591515	PDE8A	O60658	829 aa		29.07	■■■□□ 2.24
LSM7-206	ENST00000591515	LAMB1	P07942	1786 aa		29.07	■■■□□ 2.24
LSM7-206	ENST00000591515	MYH3	P11055	1940 aa		29.07	■■■□□ 2.24
LSM7-206	ENST00000591515	MS4A1	P11836	297 aa		29.07	■■■□□ 2.24
LSM7-206	ENST00000591515	TTLL12	Q14166	644 aa	Predicted RBP	29.07	■■■□□ 2.24
LSM7-206	ENST00000591515	KIAA0100	Q14667	2235 aa	Known RBP	29.07	■■■□□ 2.24
LSM7-206	ENST00000591515	USP17L1	Q7RTZ2	530 aa		29.07	■■■□□ 2.24
LSM7-206	ENST00000591515	UBE3B	Q7Z3V4	1068 aa		29.07	■■■□□ 2.24
LSM7-206	ENST00000591515	GCC1	Q96CN9	775 aa		29.07	■■■□□ 2.24
LSM7-206	ENST00000591515	XDH	P47989	1333 aa		29.06	■■■□□ 2.24
LSM7-206	ENST00000591515	GRM8	O00222	908 aa		29.06	■■■□□ 2.24
LSM7-206	ENST00000591515	FKTN	O75072	461 aa		29.06	■■■□□ 2.24
LSM7-206	ENST00000591515	CFHR5	Q9BXR6	569 aa		29.06	■■■□□ 2.24
LSM7-206	ENST00000591515	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	29.05	■■■□□ 2.24
LSM7-206	ENST00000591515	HDAC5	Q9UQL6	1122 aa		29.05	■■■□□ 2.24
LSM7-206	ENST00000591515	CCDC152	Q4G0S7	254 aa		29.04	■■■□□ 2.24
LSM7-206	ENST00000591515	PODN	Q7Z5L7	613 aa		29.04	■■■□□ 2.24
LSM7-206	ENST00000591515	CCDC85A	Q96PX6	553 aa	Predicted RBP	29.04	■■■□□ 2.24
LSM7-206	ENST00000591515	WTIP	A6NIX2	430 aa	Predicted RBP	29.03	■■■□□ 2.24
LSM7-206	ENST00000591515	SREBF2	Q12772	1141 aa		29.03	■■■□□ 2.24
LSM7-206	ENST00000591515	FTSJ3	Q8IY81	847 aa	Known RBP	29.03	■■■□□ 2.24
LSM7-206	ENST00000591515	MXD3	Q9BW11	206 aa		29.03	■■■□□ 2.24
LSM7-206	ENST00000591515	CENPF	P49454	3210 aa		29.03	■■■□□ 2.24

Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms