RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 RPS6KB1P23443 525 aa11.91□□□□□ -0.5
TRAPPC8-211ENST00000582539 ZMYM1Q5SVZ6 1142 aa11.91□□□□□ -0.5
TRAPPC8-211ENST00000582539 ZNF34Q8IZ26 560 aa11.91□□□□□ -0.5
TRAPPC8-211ENST00000582539 ZMYM6O95789 1325 aa11.91□□□□□ -0.5
TRAPPC8-211ENST00000582539 SF3B2Q13435 895 aaKnown RBP11.9□□□□□ -0.5
TRAPPC8-211ENST00000582539 LARP1BQ659C4 914 aaKnown RBP11.9□□□□□ -0.5
TRAPPC8-211ENST00000582539 NFXL1Q6ZNB6 911 aa11.9□□□□□ -0.5
TRAPPC8-211ENST00000582539 KCNB2Q92953 911 aa11.9□□□□□ -0.5
TRAPPC8-211ENST00000582539 XAGE2Q96GT9 111 aa11.9□□□□□ -0.5
TRAPPC8-211ENST00000582539 CRNKL1Q9BZJ0 848 aaKnown RBP11.9□□□□□ -0.5
TRAPPC8-211ENST00000582539 CEP131Q9UPN4 1083 aa11.9□□□□□ -0.5
TRAPPC8-211ENST00000582539 NARFQ9UHQ1 456 aa11.9□□□□□ -0.5
TRAPPC8-211ENST00000582539 LEMD3Q9Y2U8 911 aa11.9□□□□□ -0.5
TRAPPC8-211ENST00000582539 CCDC69A6NI79 296 aa11.9□□□□□ -0.5
TRAPPC8-211ENST00000582539 ZBTB22O15209 634 aa11.9□□□□□ -0.5
TRAPPC8-211ENST00000582539 PDE8BO95263 885 aa11.9□□□□□ -0.5
TRAPPC8-211ENST00000582539 TRAF1Q13077 416 aa11.9□□□□□ -0.5
TRAPPC8-211ENST00000582539 SF3A1Q15459 793 aaKnown RBP11.9□□□□□ -0.5
TRAPPC8-211ENST00000582539 WDR66Q8TBY9 1149 aa11.9□□□□□ -0.5
TRAPPC8-211ENST00000582539 TBC1D22AQ8WUA7 517 aa11.9□□□□□ -0.5
TRAPPC8-211ENST00000582539 ASAP1Q9ULH1 1129 aa11.9□□□□□ -0.5
TRAPPC8-211ENST00000582539 SNX14Q9Y5W7 946 aa11.9□□□□□ -0.5
TRAPPC8-211ENST00000582539 ABCA3Q99758 1704 aa11.9□□□□□ -0.5
TRAPPC8-211ENST00000582539 SLC4A3P48751 1232 aa11.9□□□□□ -0.51
TRAPPC8-211ENST00000582539 FNBP4Q8N3X1 1017 aaPredicted RBP11.9□□□□□ -0.51
TRAPPC8-211ENST00000582539 SPRYD3Q8NCJ5 442 aa11.9□□□□□ -0.51
TRAPPC8-211ENST00000582539 GTPBP4Q9BZE4 634 aaKnown RBP11.9□□□□□ -0.51
TRAPPC8-211ENST00000582539 SEC24BO95487 1268 aa11.89□□□□□ -0.51
TRAPPC8-211ENST00000582539 GPTP24298 496 aa11.89□□□□□ -0.51
TRAPPC8-211ENST00000582539 GNAQP50148 359 aa11.89□□□□□ -0.51
TRAPPC8-211ENST00000582539 UVSSAQ2YD98 709 aa11.89□□□□□ -0.51
TRAPPC8-211ENST00000582539 EYA3Q99504 573 aa11.89□□□□□ -0.51
TRAPPC8-211ENST00000582539 ZNF609O15014 1411 aa11.89□□□□□ -0.51
TRAPPC8-211ENST00000582539 FOXO4P98177 505 aa11.89□□□□□ -0.51
TRAPPC8-211ENST00000582539 GIMAP6Q6P9H5 292 aa11.89□□□□□ -0.51
TRAPPC8-211ENST00000582539 TNPO1Q92973 898 aaKnown RBP11.89□□□□□ -0.51
TRAPPC8-211ENST00000582539 NAT10Q9H0A0 1025 aaKnown RBP11.89□□□□□ -0.51
TRAPPC8-211ENST00000582539 NBPF26B4DH59 902 aa11.89□□□□□ -0.51
TRAPPC8-211ENST00000582539 SLC27A2O14975 620 aa11.89□□□□□ -0.51
TRAPPC8-211ENST00000582539 STX6O43752 255 aa11.89□□□□□ -0.51
TRAPPC8-211ENST00000582539 ZSCAN22P10073 491 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC8-211ENST00000582539 ALX1Q15699 326 aa11.89□□□□□ -0.51
TRAPPC8-211ENST00000582539 NBPF14Q5TI25 921 aa11.89□□□□□ -0.51
TRAPPC8-211ENST00000582539 NBPF10Q6P3W6 841 aaKnown RBP11.89□□□□□ -0.51
TRAPPC8-211ENST00000582539 NBPF15Q8N660 670 aa11.89□□□□□ -0.51
TRAPPC8-211ENST00000582539 ZNF274Q96GC6 653 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC8-211ENST00000582539 CICQ96RK0 1608 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC8-211ENST00000582539 SLIT2O94813 1529 aa11.89□□□□□ -0.51
TRAPPC8-211ENST00000582539 SASH1O94885 1247 aa11.88□□□□□ -0.51
TRAPPC8-211ENST00000582539 TDO2P48775 406 aa11.88□□□□□ -0.51
TRAPPC8-211ENST00000582539 MCTP1Q6DN14 999 aa11.88□□□□□ -0.51
TRAPPC8-211ENST00000582539 DDX19AQ9NUU7 478 aaKnown RBP11.88□□□□□ -0.51
TRAPPC8-211ENST00000582539 IQCA1Q86XH1 822 aa11.88□□□□□ -0.51
TRAPPC8-211ENST00000582539 DBNDD2Q9BQY9 259 aa11.88□□□□□ -0.51
TRAPPC8-211ENST00000582539 UBAC1Q9BSL1 405 aa11.88□□□□□ -0.51
TRAPPC8-211ENST00000582539 KCPQ6ZWJ8 1503 aa11.88□□□□□ -0.51
TRAPPC8-211ENST00000582539 BAG4O95429 457 aaKnown RBP11.88□□□□□ -0.51
TRAPPC8-211ENST00000582539 IDH1O75874 414 aaKnown RBP11.88□□□□□ -0.51
TRAPPC8-211ENST00000582539 SF3B3Q15393 1217 aaKnown RBP11.88□□□□□ -0.51
TRAPPC8-211ENST00000582539 OTUD7AQ8TE49 926 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC8-211ENST00000582539 NOL7Q9UMY1 257 aaKnown RBP11.88□□□□□ -0.51
TRAPPC8-211ENST00000582539 RFX5P48382 616 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC8-211ENST00000582539 CCDC173Q0VFZ6 552 aa11.87□□□□□ -0.51
TRAPPC8-211ENST00000582539 NAA16Q6N069 864 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC8-211ENST00000582539 RAI14Q9P0K7 980 aa11.87□□□□□ -0.51
TRAPPC8-211ENST00000582539 ZBTB1Q9Y2K1 713 aa11.87□□□□□ -0.51
TRAPPC8-211ENST00000582539 RGPD2P0DJD1 1756 aa11.87□□□□□ -0.51
TRAPPC8-211ENST00000582539 ATP2B4P23634 1241 aa11.87□□□□□ -0.51
TRAPPC8-211ENST00000582539 UBE2HP62256 183 aa11.87□□□□□ -0.51
TRAPPC8-211ENST00000582539 PDE4BQ07343 736 aa11.87□□□□□ -0.51
TRAPPC8-211ENST00000582539 BRAPQ7Z569 592 aa11.87□□□□□ -0.51
TRAPPC8-211ENST00000582539 KAT6BQ8WYB5 2073 aa11.87□□□□□ -0.51
TRAPPC8-211ENST00000582539 VPS37CA5D8V6 355 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC8-211ENST00000582539 PTMAP06454 111 aaKnown RBP11.87□□□□□ -0.51
TRAPPC8-211ENST00000582539 CC2D2BQ6DHV5 1058 aa11.87□□□□□ -0.51
TRAPPC8-211ENST00000582539 SUPT20HQ8NEM7 779 aa11.87□□□□□ -0.51
TRAPPC8-211ENST00000582539 ESR2Q92731 530 aa11.87□□□□□ -0.51
TRAPPC8-211ENST00000582539 KIF5BP33176 963 aa11.86□□□□□ -0.51
TRAPPC8-211ENST00000582539 SLC10A5Q5PT55 438 aa11.86□□□□□ -0.51
TRAPPC8-211ENST00000582539 TTLL11Q8NHH1 800 aa11.86□□□□□ -0.51
TRAPPC8-211ENST00000582539 RBM28Q9NW13 759 aaKnown RBP11.86□□□□□ -0.51
TRAPPC8-211ENST00000582539 DBNLQ9UJU6 430 aaKnown RBP11.86□□□□□ -0.51
TRAPPC8-211ENST00000582539 PAPPAQ13219 1627 aa11.86□□□□□ -0.51
TRAPPC8-211ENST00000582539 CCDC47Q96A33 483 aaKnown RBP11.86□□□□□ -0.51
TRAPPC8-211ENST00000582539 BSDC1Q9NW68 430 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC8-211ENST00000582539 RGPD5Q99666 1765 aa11.86□□□□□ -0.51
TRAPPC8-211ENST00000582539 CASP7P55210 303 aa11.86□□□□□ -0.51
TRAPPC8-211ENST00000582539 FAM98CQ17RN3 349 aaKnown RBP11.86□□□□□ -0.51
TRAPPC8-211ENST00000582539 CCDC183Q5T5S1 534 aa11.86□□□□□ -0.51
TRAPPC8-211ENST00000582539 CNBD1Q8NA66 436 aa11.86□□□□□ -0.51
TRAPPC8-211ENST00000582539 TOMM22Q9NS69 142 aa11.86□□□□□ -0.51
TRAPPC8-211ENST00000582539 LTBP4Q8N2S1 1624 aa11.86□□□□□ -0.51
TRAPPC8-211ENST00000582539 ARID4AP29374 1257 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC8-211ENST00000582539 NLGN1Q8N2Q7 840 aa11.86□□□□□ -0.51
TRAPPC8-211ENST00000582539 MED23Q9ULK4 1368 aa11.85□□□□□ -0.51
TRAPPC8-211ENST00000582539 PIP4K2AP48426 406 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC8-211ENST00000582539 USPL1Q5W0Q7 1092 aa11.85□□□□□ -0.51
TRAPPC8-211ENST00000582539 FAM89AQ96GI7 184 aa11.85□□□□□ -0.51
TRAPPC8-211ENST00000582539 ANTXR1Q9H6X2 564 aa11.85□□□□□ -0.51
TRAPPC8-211ENST00000582539 AFDNP55196 1824 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 1714 ms