RNA–Protein interactions for RNA: ENST00000570001.5

PDXDC1-217, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 4,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-217ENST00000570001 LOC102724428A0A0B4J2F2 783 aa13.68□□□□□ -0.22
PDXDC1-217ENST00000570001 SIK1P57059 783 aa13.68□□□□□ -0.22
PDXDC1-217ENST00000570001 TPM4P67936 248 aa13.68□□□□□ -0.22
PDXDC1-217ENST00000570001 HLFQ16534 295 aa13.68□□□□□ -0.22
PDXDC1-217ENST00000570001 CAMK4Q16566 473 aa13.68□□□□□ -0.22
PDXDC1-217ENST00000570001 MAP3K11Q16584 847 aa13.67□□□□□ -0.22
PDXDC1-217ENST00000570001 C8orf76Q96K31 380 aa13.67□□□□□ -0.22
PDXDC1-217ENST00000570001 KLF18A0A0U1RQI7 1052 aa13.67□□□□□ -0.22
PDXDC1-217ENST00000570001 RAB11FIP4Q86YS3 637 aa13.67□□□□□ -0.22
PDXDC1-217ENST00000570001 IQSEC3Q9UPP2 1182 aaPredicted RBP13.67□□□□□ -0.22
PDXDC1-217ENST00000570001 COL5A2P05997 1499 aaPredicted RBP13.67□□□□□ -0.22
PDXDC1-217ENST00000570001 KDM4FA0A1W2PPD8 638 aa13.67□□□□□ -0.22
PDXDC1-217ENST00000570001 PRC1O43663 620 aa13.67□□□□□ -0.22
PDXDC1-217ENST00000570001 RFX5P48382 616 aaPredicted RBP13.67□□□□□ -0.22
PDXDC1-217ENST00000570001 ZSCAN16Q9H4T2 348 aaPredicted RBP13.67□□□□□ -0.22
PDXDC1-217ENST00000570001 LPIN2Q92539 896 aa13.67□□□□□ -0.22
PDXDC1-217ENST00000570001 G3V3G9 751 aa13.66□□□□□ -0.22
PDXDC1-217ENST00000570001 GPAA1O43292 621 aa13.66□□□□□ -0.22
PDXDC1-217ENST00000570001 NRDCO43847 1150 aa13.66□□□□□ -0.22
PDXDC1-217ENST00000570001 CRKLP46109 303 aaKnown RBP13.66□□□□□ -0.22
PDXDC1-217ENST00000570001 DCAF8Q5TAQ9 597 aa13.66□□□□□ -0.22
PDXDC1-217ENST00000570001 NBPF5PQ86XG9 351 aaPredicted RBP13.66□□□□□ -0.22
PDXDC1-217ENST00000570001 UBAC1Q9BSL1 405 aa13.66□□□□□ -0.22
PDXDC1-217ENST00000570001 FAM208AQ9UK61 1670 aaKnown RBP13.66□□□□□ -0.22
PDXDC1-217ENST00000570001 HSPD1P10809 573 aaKnown RBP13.66□□□□□ -0.22
PDXDC1-217ENST00000570001 ZNF445P59923 1031 aa13.66□□□□□ -0.22
PDXDC1-217ENST00000570001 TRIM22Q8IYM9 498 aa13.66□□□□□ -0.22
PDXDC1-217ENST00000570001 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.66□□□□□ -0.22
PDXDC1-217ENST00000570001 FSD2A1L4K1 749 aa13.66□□□□□ -0.22
PDXDC1-217ENST00000570001 MINDY4BA8MYZ0 360 aa13.66□□□□□ -0.22
PDXDC1-217ENST00000570001 CHAF1AQ13111 956 aaPredicted RBP13.66□□□□□ -0.22
PDXDC1-217ENST00000570001 FBXW7Q969H0 707 aa13.66□□□□□ -0.22
PDXDC1-217ENST00000570001 CCDC34Q96HJ3 373 aa13.66□□□□□ -0.22
PDXDC1-217ENST00000570001 LARGE1O95461 756 aa13.66□□□□□ -0.22
PDXDC1-217ENST00000570001 CYP21A2P08686 494 aa13.66□□□□□ -0.22
PDXDC1-217ENST00000570001 ZMYM1Q5SVZ6 1142 aa13.66□□□□□ -0.22
PDXDC1-217ENST00000570001 NUP133Q8WUM0 1156 aa13.66□□□□□ -0.22
PDXDC1-217ENST00000570001 TTC14Q96N46 770 aa13.66□□□□□ -0.22
PDXDC1-217ENST00000570001 SETDB2Q96T68 719 aa13.66□□□□□ -0.22
PDXDC1-217ENST00000570001 PLEKHG2Q9H7P9 1386 aa13.66□□□□□ -0.22
PDXDC1-217ENST00000570001 MROH5Q6ZUA9 1318 aa13.65□□□□□ -0.22
PDXDC1-217ENST00000570001 MED1Q15648 1581 aaPredicted RBP13.65□□□□□ -0.22
PDXDC1-217ENST00000570001 CYP19A1P11511 503 aaPredicted RBP13.65□□□□□ -0.22
PDXDC1-217ENST00000570001 ORC3Q9UBD5 711 aaPredicted RBP13.65□□□□□ -0.22
PDXDC1-217ENST00000570001 PTPDC1A2A3K4 754 aa13.65□□□□□ -0.22
PDXDC1-217ENST00000570001 ERVV-1B6SEH8 477 aa13.65□□□□□ -0.22
PDXDC1-217ENST00000570001 IFIT3O14879 490 aaKnown RBP13.65□□□□□ -0.22
PDXDC1-217ENST00000570001 GADD45BO75293 160 aaPredicted RBP13.65□□□□□ -0.22
PDXDC1-217ENST00000570001 CLEC17AQ6ZS10 378 aa13.65□□□□□ -0.22
PDXDC1-217ENST00000570001 ATG9AQ7Z3C6 839 aa13.65□□□□□ -0.22
PDXDC1-217ENST00000570001 MAGEB6Q8N7X4 407 aa13.65□□□□□ -0.22
PDXDC1-217ENST00000570001 GPT2Q8TD30 523 aa13.65□□□□□ -0.22
PDXDC1-217ENST00000570001 TMEM63CQ9P1W3 806 aa13.65□□□□□ -0.22
PDXDC1-217ENST00000570001 E7EWF7 191 aa13.65□□□□□ -0.22
PDXDC1-217ENST00000570001 TRIM28Q13263 835 aaKnown RBP13.65□□□□□ -0.22
PDXDC1-217ENST00000570001 GAS2L3Q86XJ1 694 aa13.65□□□□□ -0.22
PDXDC1-217ENST00000570001 SYNE4Q8N205 404 aa13.65□□□□□ -0.22
PDXDC1-217ENST00000570001 TTLL11Q8NHH1 800 aa13.65□□□□□ -0.22
PDXDC1-217ENST00000570001 THRAP3Q9Y2W1 955 aaKnown RBP13.64□□□□□ -0.23
PDXDC1-217ENST00000570001 SLC3A2P08195 630 aaKnown RBP13.64□□□□□ -0.23
PDXDC1-217ENST00000570001 MICU3Q86XE3 530 aa13.64□□□□□ -0.23
PDXDC1-217ENST00000570001 NLRP3Q96P20 1036 aa13.64□□□□□ -0.23
PDXDC1-217ENST00000570001 ZDHHC9Q9Y397 364 aa13.64□□□□□ -0.23
PDXDC1-217ENST00000570001 PDE8BO95263 885 aa13.64□□□□□ -0.23
PDXDC1-217ENST00000570001 XBP1P17861 261 aa13.64□□□□□ -0.23
PDXDC1-217ENST00000570001 TMEM67Q5HYA8 995 aa13.64□□□□□ -0.23
PDXDC1-217ENST00000570001 GIMAP6Q6P9H5 292 aa13.64□□□□□ -0.23
PDXDC1-217ENST00000570001 CDC37L1Q7L3B6 337 aa13.64□□□□□ -0.23
PDXDC1-217ENST00000570001 MTMR6Q9Y217 621 aa13.64□□□□□ -0.23
PDXDC1-217ENST00000570001 SLC12A7Q9Y666 1083 aa13.64□□□□□ -0.23
PDXDC1-217ENST00000570001 CYP2E1P05181 493 aaPredicted RBP13.64□□□□□ -0.23
PDXDC1-217ENST00000570001 FAM173BQ6P4H8 233 aa13.64□□□□□ -0.23
PDXDC1-217ENST00000570001 GTF3C6Q969F1 213 aa13.64□□□□□ -0.23
PDXDC1-217ENST00000570001 MAST3O60307 1309 aa13.63□□□□□ -0.23
PDXDC1-217ENST00000570001 JAK2O60674 1132 aa13.63□□□□□ -0.23
PDXDC1-217ENST00000570001 METAP2P50579 478 aaKnown RBP eCLIP13.63□□□□□ -0.23
PDXDC1-217ENST00000570001 MFSD6Q6ZSS7 791 aa13.63□□□□□ -0.23
PDXDC1-217ENST00000570001 LRRC37A3O60309 1634 aa13.63□□□□□ -0.23
PDXDC1-217ENST00000570001 TTLL5Q6EMB2 1281 aa13.63□□□□□ -0.23
PDXDC1-217ENST00000570001 RNF41Q9H4P4 317 aaPredicted RBP13.63□□□□□ -0.23
PDXDC1-217ENST00000570001 DDX19AQ9NUU7 478 aaKnown RBP13.63□□□□□ -0.23
PDXDC1-217ENST00000570001 GOLGA8AA7E2F4 631 aa13.63□□□□□ -0.23
PDXDC1-217ENST00000570001 CYP7A1P22680 504 aa13.63□□□□□ -0.23
PDXDC1-217ENST00000570001 RFC4P35249 363 aa13.63□□□□□ -0.23
PDXDC1-217ENST00000570001 CCDC102BQ68D86 513 aa13.63□□□□□ -0.23
PDXDC1-217ENST00000570001 ZSCAN30Q86W11 494 aa13.63□□□□□ -0.23
PDXDC1-217ENST00000570001 CKAP2LQ8IYA6 745 aa13.63□□□□□ -0.23
PDXDC1-217ENST00000570001 SLC4A4Q9Y6R1 1079 aa13.63□□□□□ -0.23
PDXDC1-217ENST00000570001 RGPD2P0DJD1 1756 aa13.62□□□□□ -0.23
PDXDC1-217ENST00000570001 CCDC144CPQ8IYA2 1237 aa13.62□□□□□ -0.23
PDXDC1-217ENST00000570001 JMYQ8N9B5 988 aa13.62□□□□□ -0.23
PDXDC1-217ENST00000570001 AK7Q96M32 723 aa13.62□□□□□ -0.23
PDXDC1-217ENST00000570001 RBSNQ9H1K0 784 aa13.62□□□□□ -0.23
PDXDC1-217ENST00000570001 MPNDQ8N594 471 aa13.62□□□□□ -0.23
PDXDC1-217ENST00000570001 LLPHQ9BRT6 129 aaKnown RBP13.62□□□□□ -0.23
PDXDC1-217ENST00000570001 NCOA5Q9HCD5 579 aaKnown RBP13.62□□□□□ -0.23
PDXDC1-217ENST00000570001 ANKIB1Q9P2G1 1089 aa13.62□□□□□ -0.23
PDXDC1-217ENST00000570001 CAMTA1Q9Y6Y1 1673 aa13.62□□□□□ -0.23
PDXDC1-217ENST00000570001 PI16Q6UXB8 463 aa13.62□□□□□ -0.23
PDXDC1-217ENST00000570001 NYXQ9GZU5 481 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms