RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 C1QTNF8P60827 252 aa21.59■■□□□ 1.05
USB1-209ENST00000564387 MVPQ14764 893 aaKnown RBP21.59■■□□□ 1.05
USB1-209ENST00000564387 HACL1Q9UJ83 578 aa21.59■■□□□ 1.05
USB1-209ENST00000564387 SRGAP3O43295 1099 aa21.58■■□□□ 1.05
USB1-209ENST00000564387 KCNJ4P48050 445 aa21.58■■□□□ 1.05
USB1-209ENST00000564387 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.58■■□□□ 1.05
USB1-209ENST00000564387 DPF2Q92785 391 aa21.58■■□□□ 1.05
USB1-209ENST00000564387 GPRC5DQ9NZD1 345 aa21.58■■□□□ 1.05
USB1-209ENST00000564387 ZNF646O15015 1829 aaPredicted RBP21.57■■□□□ 1.04
USB1-209ENST00000564387 ADAMTSL1Q8N6G6 1762 aa21.56■■□□□ 1.04
USB1-209ENST00000564387 PNMA6EA0A0J9YXQ4 647 aa21.56■■□□□ 1.04
USB1-209ENST00000564387 G3V3G9 751 aa21.56■■□□□ 1.04
USB1-209ENST00000564387 IL1R1P14778 569 aa21.56■■□□□ 1.04
USB1-209ENST00000564387 FGFR2P21802 821 aa21.56■■□□□ 1.04
USB1-209ENST00000564387 RPS12P25398 132 aaKnown RBP21.56■■□□□ 1.04
USB1-209ENST00000564387 EPHX2P34913 555 aa21.56■■□□□ 1.04
USB1-209ENST00000564387 GMPSP49915 693 aaPredicted RBP21.56■■□□□ 1.04
USB1-209ENST00000564387 ATP8B2P98198 1209 aa21.56■■□□□ 1.04
USB1-209ENST00000564387 POLA2Q14181 598 aa21.56■■□□□ 1.04
USB1-209ENST00000564387 METTL24Q5JXM2 366 aa21.56■■□□□ 1.04
USB1-209ENST00000564387 DCAF8Q5TAQ9 597 aa21.56■■□□□ 1.04
USB1-209ENST00000564387 SSH3Q8TE77 659 aa21.56■■□□□ 1.04
USB1-209ENST00000564387 CD209Q9NNX6 404 aa21.56■■□□□ 1.04
USB1-209ENST00000564387 DDX19BQ9UMR2 479 aa21.56■■□□□ 1.04
USB1-209ENST00000564387 PA2G4Q9UQ80 394 aaKnown RBP21.56■■□□□ 1.04
USB1-209ENST00000564387 IL15P40933 162 aaPredicted RBP21.55■■□□□ 1.04
USB1-209ENST00000564387 EPS15P42566 896 aa21.55■■□□□ 1.04
USB1-209ENST00000564387 C20orf194Q5TEA3 1177 aa21.55■■□□□ 1.04
USB1-209ENST00000564387 C16orf71Q8IYS4 520 aaPredicted RBP21.55■■□□□ 1.04
USB1-209ENST00000564387 GMLQ99445 158 aa21.55■■□□□ 1.04
USB1-209ENST00000564387 ZBTB40Q9NUA8 1239 aa21.55■■□□□ 1.04
USB1-209ENST00000564387 USP17L3A6NCW0 530 aa21.54■■□□□ 1.04
USB1-209ENST00000564387 USP17L4A6NCW7 530 aa21.54■■□□□ 1.04
USB1-209ENST00000564387 FSTL1Q12841 308 aa21.54■■□□□ 1.04
USB1-209ENST00000564387 USP17L1Q7RTZ2 530 aa21.54■■□□□ 1.04
USB1-209ENST00000564387 PNMA8AQ86V59 439 aaPredicted RBP21.54■■□□□ 1.04
USB1-209ENST00000564387 FAM84BQ96KN1 310 aaPredicted RBP21.54■■□□□ 1.04
USB1-209ENST00000564387 COG6Q9Y2V7 657 aa21.54■■□□□ 1.04
USB1-209ENST00000564387 LMOD1P29536 600 aaPredicted RBP21.53■■□□□ 1.04
USB1-209ENST00000564387 DACT2Q5SW24 774 aa21.53■■□□□ 1.04
USB1-209ENST00000564387 STRIP1Q5VSL9 837 aa21.53■■□□□ 1.04
USB1-209ENST00000564387 RSBN1LQ6PCB5 846 aaPredicted RBP21.53■■□□□ 1.04
USB1-209ENST00000564387 ZNF804AQ7Z570 1209 aa21.53■■□□□ 1.04
USB1-209ENST00000564387 AGBL3Q8NEM8 1001 aa21.53■■□□□ 1.04
USB1-209ENST00000564387 SIL1Q9H173 461 aa21.53■■□□□ 1.04
USB1-209ENST00000564387 ZBTB12Q9Y330 459 aaPredicted RBP21.53■■□□□ 1.04
USB1-209ENST00000564387 PUM3Q15397 648 aaKnown RBP21.52■■□□□ 1.04
USB1-209ENST00000564387 USP50Q70EL3 339 aaPredicted RBP21.52■■□□□ 1.04
USB1-209ENST00000564387 FBXO33Q7Z6M2 555 aa21.52■■□□□ 1.04
USB1-209ENST00000564387 LDHDQ86WU2 507 aa21.52■■□□□ 1.04
USB1-209ENST00000564387 TDRD7Q8NHU6 1098 aaKnown RBP21.52■■□□□ 1.04
USB1-209ENST00000564387 CHMP4BQ9H444 224 aaKnown RBP21.52■■□□□ 1.04
USB1-209ENST00000564387 C1orf115Q9H7X2 142 aa21.52■■□□□ 1.04
USB1-209ENST00000564387 ADARB2Q9NS39 739 aaKnown RBP21.52■■□□□ 1.04
USB1-209ENST00000564387 CNOT7Q9UIV1 285 aaKnown RBP21.52■■□□□ 1.04
USB1-209ENST00000564387 POTEIP0CG38 1075 aa21.51■■□□□ 1.03
USB1-209ENST00000564387 POTEJP0CG39 1038 aa21.51■■□□□ 1.03
USB1-209ENST00000564387 CEP85Q6P2H3 762 aa21.51■■□□□ 1.03
USB1-209ENST00000564387 SMC1BQ8NDV3 1235 aa21.51■■□□□ 1.03
USB1-209ENST00000564387 CEP126Q9P2H0 1117 aa21.51■■□□□ 1.03
USB1-209ENST00000564387 ZBTB22O15209 634 aa21.5■■□□□ 1.03
USB1-209ENST00000564387 HIBADHP31937 336 aaKnown RBP21.5■■□□□ 1.03
USB1-209ENST00000564387 LPIN2Q92539 896 aa21.5■■□□□ 1.03
USB1-209ENST00000564387 NOP58Q9Y2X3 529 aaKnown RBP21.5■■□□□ 1.03
USB1-209ENST00000564387 SASH1O94885 1247 aa21.49■■□□□ 1.03
USB1-209ENST00000564387 GYG1P46976 350 aa21.49■■□□□ 1.03
USB1-209ENST00000564387 RRP1P56182 461 aaKnown RBP21.49■■□□□ 1.03
USB1-209ENST00000564387 ZNF280AP59817 542 aaPredicted RBP21.49■■□□□ 1.03
USB1-209ENST00000564387 FKBP1AP62942 108 aaKnown RBP21.49■■□□□ 1.03
USB1-209ENST00000564387 TTLL5Q6EMB2 1281 aa21.49■■□□□ 1.03
USB1-209ENST00000564387 CHADLQ6NUI6 762 aa21.49■■□□□ 1.03
USB1-209ENST00000564387 PGAP2Q9UHJ9 254 aa21.49■■□□□ 1.03
USB1-209ENST00000564387 MYO3BQ8WXR4 1341 aa21.49■■□□□ 1.03
USB1-209ENST00000564387 SHTN1A0MZ66 631 aa21.48■■□□□ 1.03
USB1-209ENST00000564387 MMP14P50281 582 aa21.48■■□□□ 1.03
USB1-209ENST00000564387 MICALL2Q8IY33 904 aa21.48■■□□□ 1.03
USB1-209ENST00000564387 FAM205AQ6ZU69 1335 aa21.48■■□□□ 1.03
USB1-209ENST00000564387 H7C1D1 291 aa21.47■■□□□ 1.03
USB1-209ENST00000564387 IFIT1P09914 478 aaKnown RBP21.47■■□□□ 1.03
USB1-209ENST00000564387 HIRAP54198 1017 aaPredicted RBP21.47■■□□□ 1.03
USB1-209ENST00000564387 GTF2IP78347 998 aa21.47■■□□□ 1.03
USB1-209ENST00000564387 RPAP2Q8IXW5 612 aaPredicted RBP21.47■■□□□ 1.03
USB1-209ENST00000564387 SLC5A1P13866 664 aa21.46■■□□□ 1.03
USB1-209ENST00000564387 ATP2B3Q16720 1220 aa21.46■■□□□ 1.03
USB1-209ENST00000564387 CAVIN4Q5BKX8 364 aa21.46■■□□□ 1.03
USB1-209ENST00000564387 ZC3H15Q8WU90 426 aaKnown RBP21.46■■□□□ 1.03
USB1-209ENST00000564387 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.46■■□□□ 1.03
USB1-209ENST00000564387 TFCP2Q12800 502 aa21.45■■□□□ 1.02
USB1-209ENST00000564387 EAPPQ56P03 285 aaPredicted RBP21.45■■□□□ 1.02
USB1-209ENST00000564387 SIRT2Q8IXJ6 389 aa21.45■■□□□ 1.02
USB1-209ENST00000564387 MXD3Q9BW11 206 aa21.45■■□□□ 1.02
USB1-209ENST00000564387 ARAP2Q8WZ64 1704 aa21.44■■□□□ 1.02
USB1-209ENST00000564387 ITGBL1O95965 494 aaPredicted RBP21.44■■□□□ 1.02
USB1-209ENST00000564387 USP17L8P0C7I0 530 aa21.44■■□□□ 1.02
USB1-209ENST00000564387 BCAMP50895 628 aa21.44■■□□□ 1.02
USB1-209ENST00000564387 G3BP1Q13283 466 aaKnown RBP eCLIP21.44■■□□□ 1.02
USB1-209ENST00000564387 CERS5Q8N5B7 392 aa21.44■■□□□ 1.02
USB1-209ENST00000564387 TRPM4Q8TD43 1214 aa21.44■■□□□ 1.02
USB1-209ENST00000564387 AKAP2Q9Y2D5 859 aa21.44■■□□□ 1.02
USB1-209ENST00000564387 EGFRP00533 1210 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 251.1 ms