RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 TBC1D16Q8TBP0 767 aa13.99□□□□□ -0.17
CHGA-205ENST00000556098 ARHGAP45Q92619 1136 aa13.99□□□□□ -0.17
CHGA-205ENST00000556098 TSR2Q969E8 191 aaKnown RBP13.99□□□□□ -0.17
CHGA-205ENST00000556098 HPS5Q9UPZ3 1129 aa13.99□□□□□ -0.17
CHGA-205ENST00000556098 ZNF646O15015 1829 aaPredicted RBP13.99□□□□□ -0.17
CHGA-205ENST00000556098 ECM29Q5VYK3 1845 aa13.99□□□□□ -0.17
CHGA-205ENST00000556098 SCARF1Q14162 830 aa13.98□□□□□ -0.17
CHGA-205ENST00000556098 PRAMEF18Q5VWM3 479 aa13.98□□□□□ -0.17
CHGA-205ENST00000556098 MBIPQ9NS73 344 aa13.98□□□□□ -0.17
CHGA-205ENST00000556098 SMC4Q9NTJ3 1288 aa13.98□□□□□ -0.17
CHGA-205ENST00000556098 UBE2Q2LH0YL09 131 aa13.97□□□□□ -0.17
CHGA-205ENST00000556098 IRS4O14654 1257 aaPredicted RBP13.97□□□□□ -0.17
CHGA-205ENST00000556098 BCAR3O75815 825 aa13.97□□□□□ -0.17
CHGA-205ENST00000556098 PRKG1Q13976 671 aa13.97□□□□□ -0.17
CHGA-205ENST00000556098 HDGFL1Q5TGJ6 251 aa13.97□□□□□ -0.17
CHGA-205ENST00000556098 EXOC6Q8TAG9 804 aa13.97□□□□□ -0.17
CHGA-205ENST00000556098 PLBD2Q8NHP8 589 aa13.96□□□□□ -0.17
CHGA-205ENST00000556098 JARID2Q92833 1246 aaPredicted RBP13.96□□□□□ -0.17
CHGA-205ENST00000556098 CRBNQ96SW2 442 aa13.96□□□□□ -0.17
CHGA-205ENST00000556098 SEC31BQ9NQW1 1179 aa13.96□□□□□ -0.17
CHGA-205ENST00000556098 GGA1Q9UJY5 639 aa13.96□□□□□ -0.17
CHGA-205ENST00000556098 PLIN1O60240 522 aa13.95□□□□□ -0.18
CHGA-205ENST00000556098 RPS8P62241 208 aaKnown RBP13.95□□□□□ -0.18
CHGA-205ENST00000556098 TWISTNBQ3B726 338 aaPredicted RBP13.95□□□□□ -0.18
CHGA-205ENST00000556098 ANKRD13DQ6ZTN6 518 aa13.95□□□□□ -0.18
CHGA-205ENST00000556098 ZNF296Q8WUU4 475 aaPredicted RBP13.95□□□□□ -0.18
CHGA-205ENST00000556098 VAMP4O75379 141 aa13.94□□□□□ -0.18
CHGA-205ENST00000556098 VIL1P09327 827 aaKnown RBP13.94□□□□□ -0.18
CHGA-205ENST00000556098 SF3B3Q15393 1217 aaKnown RBP13.94□□□□□ -0.18
CHGA-205ENST00000556098 RSBN1LQ6PCB5 846 aaPredicted RBP13.94□□□□□ -0.18
CHGA-205ENST00000556098 ATF7IPQ6VMQ6 1270 aa13.94□□□□□ -0.18
CHGA-205ENST00000556098 RIC3Q7Z5B4 369 aa13.94□□□□□ -0.18
CHGA-205ENST00000556098 FTSJ3Q8IY81 847 aaKnown RBP13.94□□□□□ -0.18
CHGA-205ENST00000556098 MYOZ2Q9NPC6 264 aa13.94□□□□□ -0.18
CHGA-205ENST00000556098 HOXB7P09629 217 aa13.93□□□□□ -0.18
CHGA-205ENST00000556098 B4GALNT3Q6L9W6 998 aa13.93□□□□□ -0.18
CHGA-205ENST00000556098 REM2Q8IYK8 340 aaPredicted RBP13.93□□□□□ -0.18
CHGA-205ENST00000556098 DZIP1LQ8IYY4 767 aaKnown RBP13.93□□□□□ -0.18
CHGA-205ENST00000556098 SSH1Q8WYL5 1049 aa13.93□□□□□ -0.18
CHGA-205ENST00000556098 ISCA1Q9BUE6 129 aa13.93□□□□□ -0.18
CHGA-205ENST00000556098 DDX19BQ9UMR2 479 aa13.93□□□□□ -0.18
CHGA-205ENST00000556098 USP17L8P0C7I0 530 aa13.92□□□□□ -0.18
CHGA-205ENST00000556098 NF2P35240 595 aa13.92□□□□□ -0.18
CHGA-205ENST00000556098 CENPQQ7L2Z9 268 aaPredicted RBP13.92□□□□□ -0.18
CHGA-205ENST00000556098 MYD88Q99836 296 aa13.92□□□□□ -0.18
CHGA-205ENST00000556098 MXD3Q9BW11 206 aa13.92□□□□□ -0.18
CHGA-205ENST00000556098 RBBP6Q7Z6E9 1792 aaKnown RBP13.91□□□□□ -0.18
CHGA-205ENST00000556098 MVPQ14764 893 aaKnown RBP13.91□□□□□ -0.18
CHGA-205ENST00000556098 PKN2Q16513 984 aaKnown RBP13.91□□□□□ -0.18
CHGA-205ENST00000556098 FRAT1Q92837 279 aaPredicted RBP13.91□□□□□ -0.18
CHGA-205ENST00000556098 API5Q9BZZ5 524 aaKnown RBP13.91□□□□□ -0.18
CHGA-205ENST00000556098 DBF4Q9UBU7 674 aaPredicted RBP13.91□□□□□ -0.18
CHGA-205ENST00000556098 PTPRCP08575 1304 aa13.9□□□□□ -0.18
CHGA-205ENST00000556098 GPR25O00155 361 aa13.9□□□□□ -0.18
CHGA-205ENST00000556098 SASH1O94885 1247 aa13.9□□□□□ -0.18
CHGA-205ENST00000556098 ZNF280AP59817 542 aaPredicted RBP13.9□□□□□ -0.18
CHGA-205ENST00000556098 NBPF9Q3BBW0 867 aa13.9□□□□□ -0.18
CHGA-205ENST00000556098 CCDC152Q4G0S7 254 aa13.9□□□□□ -0.18
CHGA-205ENST00000556098 C20orf194Q5TEA3 1177 aa13.9□□□□□ -0.18
CHGA-205ENST00000556098 ANKRD18AQ8IVF6 992 aa13.9□□□□□ -0.18
CHGA-205ENST00000556098 AGBL3Q8NEM8 1001 aa13.9□□□□□ -0.18
CHGA-205ENST00000556098 CLUAP1Q96AJ1 413 aa13.9□□□□□ -0.18
CHGA-205ENST00000556098 A0A1B0GUL6 1792 aa13.9□□□□□ -0.18
CHGA-205ENST00000556098 USP17L3A6NCW0 530 aa13.89□□□□□ -0.19
CHGA-205ENST00000556098 USP17L4A6NCW7 530 aa13.89□□□□□ -0.19
CHGA-205ENST00000556098 FKBP1BP68106 108 aa13.89□□□□□ -0.19
CHGA-205ENST00000556098 FBXO46Q6PJ61 603 aaPredicted RBP13.89□□□□□ -0.19
CHGA-205ENST00000556098 USP17L1Q7RTZ2 530 aa13.89□□□□□ -0.19
CHGA-205ENST00000556098 MRPL50Q8N5N7 158 aaKnown RBP13.89□□□□□ -0.19
CHGA-205ENST00000556098 HYPKQ9NX55 129 aa13.89□□□□□ -0.19
CHGA-205ENST00000556098 OTOFQ9HC10 1997 aa13.89□□□□□ -0.19
CHGA-205ENST00000556098 XDHP47989 1333 aa13.89□□□□□ -0.19
CHGA-205ENST00000556098 PITPNM2Q9BZ72 1349 aa13.89□□□□□ -0.19
CHGA-205ENST00000556098 ELL2O00472 640 aaPredicted RBP13.88□□□□□ -0.19
CHGA-205ENST00000556098 FKTNO75072 461 aa13.88□□□□□ -0.19
CHGA-205ENST00000556098 TRIM27P14373 513 aa13.88□□□□□ -0.19
CHGA-205ENST00000556098 SREBF2Q12772 1141 aa13.88□□□□□ -0.19
CHGA-205ENST00000556098 ZBTB38Q8NAP3 1195 aaPredicted RBP13.88□□□□□ -0.19
CHGA-205ENST00000556098 PHAXQ9H814 394 aaKnown RBP13.88□□□□□ -0.19
CHGA-205ENST00000556098 PODXL2Q9NZ53 605 aa13.88□□□□□ -0.19
CHGA-205ENST00000556098 FZD1Q9UP38 647 aa13.88□□□□□ -0.19
CHGA-205ENST00000556098 LAMB1P07942 1786 aa13.88□□□□□ -0.19
CHGA-205ENST00000556098 PDE8AO60658 829 aa13.87□□□□□ -0.19
CHGA-205ENST00000556098 ATP2B4P23634 1241 aa13.87□□□□□ -0.19
CHGA-205ENST00000556098 OGFOD1Q8N543 542 aa13.87□□□□□ -0.19
CHGA-205ENST00000556098 C8orf58Q8NAV2 365 aa13.87□□□□□ -0.19
CHGA-205ENST00000556098 ANGEL1Q9UNK9 670 aaKnown RBP13.87□□□□□ -0.19
CHGA-205ENST00000556098 TRIM17Q9Y577 477 aa13.87□□□□□ -0.19
CHGA-205ENST00000556098 WTIPA6NIX2 430 aaPredicted RBP13.86□□□□□ -0.19
CHGA-205ENST00000556098 HSP90B1P14625 803 aaKnown RBP13.86□□□□□ -0.19
CHGA-205ENST00000556098 CCDC30Q5VVM6 783 aa13.86□□□□□ -0.19
CHGA-205ENST00000556098 ARMC9Q7Z3E5 817 aa13.86□□□□□ -0.19
CHGA-205ENST00000556098 STK31Q9BXU1 1019 aa13.86□□□□□ -0.19
CHGA-205ENST00000556098 R3HDMLQ9H3Y0 253 aa13.86□□□□□ -0.19
CHGA-205ENST00000556098 CWC25Q9NXE8 425 aaPredicted RBP13.86□□□□□ -0.19
CHGA-205ENST00000556098 NOB1Q9ULX3 412 aaKnown RBP13.86□□□□□ -0.19
CHGA-205ENST00000556098 PTPN12Q05209 780 aaKnown RBP13.85□□□□□ -0.19
CHGA-205ENST00000556098 TSPYL6Q8N831 410 aa13.85□□□□□ -0.19
CHGA-205ENST00000556098 PANK1Q8TE04 598 aa13.85□□□□□ -0.19
CHGA-205ENST00000556098 GCC1Q96CN9 775 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms