RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 FBXO3Q9UK99 471 aa21.17■□□□□ 0.98
SHOX-204ENST00000554971 HMMRO75330 724 aa21.16■□□□□ 0.98
SHOX-204ENST00000554971 CDC45O75419 566 aa21.16■□□□□ 0.98
SHOX-204ENST00000554971 ZNF277Q9NRM2 450 aaPredicted RBP21.16■□□□□ 0.98
SHOX-204ENST00000554971 TMX4Q9H1E5 349 aaPredicted RBP21.16■□□□□ 0.98
SHOX-204ENST00000554971 MROH5Q6ZUA9 1318 aa21.15■□□□□ 0.98
SHOX-204ENST00000554971 SASH1O94885 1247 aa21.15■□□□□ 0.98
SHOX-204ENST00000554971 GRIPAP1Q4V328 841 aa21.15■□□□□ 0.98
SHOX-204ENST00000554971 SLKQ9H2G2 1235 aaPredicted RBP21.15■□□□□ 0.98
SHOX-204ENST00000554971 EXOC6BQ9Y2D4 811 aa21.15■□□□□ 0.98
SHOX-204ENST00000554971 SURF6O75683 361 aaKnown RBP21.14■□□□□ 0.98
SHOX-204ENST00000554971 UFL1O94874 794 aa21.14■□□□□ 0.98
SHOX-204ENST00000554971 KLRK1P26718 216 aa21.14■□□□□ 0.98
SHOX-204ENST00000554971 IL15P40933 162 aaPredicted RBP21.14■□□□□ 0.98
SHOX-204ENST00000554971 METTL24Q5JXM2 366 aa21.14■□□□□ 0.98
SHOX-204ENST00000554971 ANKRD2Q9GZV1 360 aa21.14■□□□□ 0.98
SHOX-204ENST00000554971 IRS2Q9Y4H2 1338 aa21.14■□□□□ 0.97
SHOX-204ENST00000554971 PDE8BO95263 885 aa21.14■□□□□ 0.97
SHOX-204ENST00000554971 PLEKHM2Q8IWE5 1019 aa21.14■□□□□ 0.97
SHOX-204ENST00000554971 GGA1Q9UJY5 639 aa21.14■□□□□ 0.97
SHOX-204ENST00000554971 TXNRD3Q86VQ6 643 aa21.13■□□□□ 0.97
SHOX-204ENST00000554971 SCN9AQ15858 1988 aa21.13■□□□□ 0.97
SHOX-204ENST00000554971 TIAM2Q8IVF5 1701 aa21.12■□□□□ 0.97
SHOX-204ENST00000554971 C6orf229H3BNL8 230 aa21.12■□□□□ 0.97
SHOX-204ENST00000554971 TBC1D9Q6ZT07 1266 aa21.12■□□□□ 0.97
SHOX-204ENST00000554971 ZNF804BA4D1E1 1349 aa21.12■□□□□ 0.97
SHOX-204ENST00000554971 TFCP2Q12800 502 aa21.12■□□□□ 0.97
SHOX-204ENST00000554971 CIZ1Q9ULV3 898 aaPredicted RBP21.12■□□□□ 0.97
SHOX-204ENST00000554971 ARAP2Q8WZ64 1704 aa21.11■□□□□ 0.97
SHOX-204ENST00000554971 ATP2B4P23634 1241 aa21.11■□□□□ 0.97
SHOX-204ENST00000554971 G3BP1Q13283 466 aaKnown RBP eCLIP21.11■□□□□ 0.97
SHOX-204ENST00000554971 AOC3Q16853 763 aa21.11■□□□□ 0.97
SHOX-204ENST00000554971 LEMD3Q9Y2U8 911 aa21.11■□□□□ 0.97
SHOX-204ENST00000554971 LMNB1P20700 586 aa21.1■□□□□ 0.97
SHOX-204ENST00000554971 FGFR2P21802 821 aa21.1■□□□□ 0.97
SHOX-204ENST00000554971 IARSP41252 1262 aaKnown RBP21.1■□□□□ 0.97
SHOX-204ENST00000554971 KIAA2012Q0VF49 1180 aa21.1■□□□□ 0.97
SHOX-204ENST00000554971 TTC22Q5TAA0 569 aa21.1■□□□□ 0.97
SHOX-204ENST00000554971 WASHC4Q2M389 1173 aa21.1■□□□□ 0.97
SHOX-204ENST00000554971 MED23Q9ULK4 1368 aa21.09■□□□□ 0.97
SHOX-204ENST00000554971 DCAF8L1A6NGE4 600 aa21.09■□□□□ 0.97
SHOX-204ENST00000554971 CEP126Q9P2H0 1117 aa21.09■□□□□ 0.97
SHOX-204ENST00000554971 RIMBP2O15034 1052 aa21.08■□□□□ 0.97
SHOX-204ENST00000554971 PPIP5K2O43314 1243 aa21.08■□□□□ 0.97
SHOX-204ENST00000554971 UBE4AQ14139 1066 aa21.08■□□□□ 0.97
SHOX-204ENST00000554971 ZNF646O15015 1829 aaPredicted RBP21.08■□□□□ 0.96
SHOX-204ENST00000554971 PUM3Q15397 648 aaKnown RBP21.08■□□□□ 0.96
SHOX-204ENST00000554971 C9orf131Q5VYM1 1079 aa21.08■□□□□ 0.96
SHOX-204ENST00000554971 SUPT20HQ8NEM7 779 aa21.08■□□□□ 0.96
SHOX-204ENST00000554971 KCNJ4P48050 445 aa21.07■□□□□ 0.96
SHOX-204ENST00000554971 OS9Q13438 667 aaPredicted RBP21.07■□□□□ 0.96
SHOX-204ENST00000554971 CASC1Q6TDU7 716 aa21.07■□□□□ 0.96
SHOX-204ENST00000554971 RNF181Q9P0P0 153 aa21.07■□□□□ 0.96
SHOX-204ENST00000554971 ZNF609O15014 1411 aa21.07■□□□□ 0.96
SHOX-204ENST00000554971 APBB1O00213 710 aa21.06■□□□□ 0.96
SHOX-204ENST00000554971 DDIT3P35638 169 aa21.06■□□□□ 0.96
SHOX-204ENST00000554971 LARGE2Q8N3Y3 721 aa21.06■□□□□ 0.96
SHOX-204ENST00000554971 OSBPL3Q9H4L5 887 aa21.06■□□□□ 0.96
SHOX-204ENST00000554971 PSME4Q14997 1843 aa21.06■□□□□ 0.96
SHOX-204ENST00000554971 TIMM10P62072 90 aa21.06■□□□□ 0.96
SHOX-204ENST00000554971 C15orf52Q6ZUT6 534 aaKnown RBP21.06■□□□□ 0.96
SHOX-204ENST00000554971 ZC3H12CQ9C0D7 883 aaKnown RBP21.06■□□□□ 0.96
SHOX-204ENST00000554971 VPS33BQ9H267 617 aa21.06■□□□□ 0.96
SHOX-204ENST00000554971 GSPT1P15170 499 aaKnown RBP21.05■□□□□ 0.96
SHOX-204ENST00000554971 ATP2B3Q16720 1220 aa21.05■□□□□ 0.96
SHOX-204ENST00000554971 RHPN1Q8TCX5 695 aa21.05■□□□□ 0.96
SHOX-204ENST00000554971 LPIN2Q92539 896 aa21.05■□□□□ 0.96
SHOX-204ENST00000554971 EYA3Q99504 573 aa21.05■□□□□ 0.96
SHOX-204ENST00000554971 KIF2CQ99661 725 aa21.05■□□□□ 0.96
SHOX-204ENST00000554971 DBNDD1Q9H9R9 158 aa21.05■□□□□ 0.96
SHOX-204ENST00000554971 A0A1B0GUL7 405 aa21.04■□□□□ 0.96
SHOX-204ENST00000554971 YDJCA8MPS7 323 aa21.04■□□□□ 0.96
SHOX-204ENST00000554971 MCM4P33991 863 aa21.04■□□□□ 0.96
SHOX-204ENST00000554971 DOK7Q18PE1 504 aa21.04■□□□□ 0.96
SHOX-204ENST00000554971 FAM84BQ96KN1 310 aaPredicted RBP21.04■□□□□ 0.96
SHOX-204ENST00000554971 ADORA1P30542 326 aa21.04■□□□□ 0.96
SHOX-204ENST00000554971 GYG1P46976 350 aa21.04■□□□□ 0.96
SHOX-204ENST00000554971 IL1RAPL2Q9NP60 686 aa21.04■□□□□ 0.96
SHOX-204ENST00000554971 MYH13Q9UKX3 1938 aa21.04■□□□□ 0.96
SHOX-204ENST00000554971 HSP90AB4PQ58FF6 505 aa21.03■□□□□ 0.96
SHOX-204ENST00000554971 TNNI3KQ59H18 835 aa21.03■□□□□ 0.96
SHOX-204ENST00000554971 EAF2Q96CJ1 260 aaPredicted RBP21.03■□□□□ 0.96
SHOX-204ENST00000554971 KCNQ5Q9NR82 932 aa21.03■□□□□ 0.96
SHOX-204ENST00000554971 FPGT-TNNI3KV9GXZ4 949 aa21.03■□□□□ 0.96
SHOX-204ENST00000554971 ERC1Q8IUD2 1116 aa21.02■□□□□ 0.96
SHOX-204ENST00000554971 KIF1BPQ96EK5 621 aa21.02■□□□□ 0.96
SHOX-204ENST00000554971 GPR108Q9NPR9 543 aa21.02■□□□□ 0.96
SHOX-204ENST00000554971 FZD9O00144 591 aa21.02■□□□□ 0.95
SHOX-204ENST00000554971 SMARCA5O60264 1052 aaPredicted RBP21.02■□□□□ 0.95
SHOX-204ENST00000554971 RAB11FIP3O75154 756 aa21.02■□□□□ 0.95
SHOX-204ENST00000554971 PTMSP20962 102 aa21.02■□□□□ 0.95
SHOX-204ENST00000554971 RABEP1Q15276 862 aa21.02■□□□□ 0.95
SHOX-204ENST00000554971 TLR7Q9NYK1 1049 aaKnown RBP21.02■□□□□ 0.95
SHOX-204ENST00000554971 ECE2O60344 883 aa21.01■□□□□ 0.95
SHOX-204ENST00000554971 BCAMP50895 628 aa21.01■□□□□ 0.95
SHOX-204ENST00000554971 FBXO33Q7Z6M2 555 aa21.01■□□□□ 0.95
SHOX-204ENST00000554971 AKAP2Q9Y2D5 859 aa21.01■□□□□ 0.95
SHOX-204ENST00000554971 DDX11L8A8MPP1 907 aa21■□□□□ 0.95
SHOX-204ENST00000554971 IFIT1P09914 478 aaKnown RBP21■□□□□ 0.95
SHOX-204ENST00000554971 SLC5A1P13866 664 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms