RNA–Protein interactions for RNA: ENST00000546983.1

NKX2-1-205, Transcript of NK2 homeobox 1, humanhuman

TSL 4

Gene NKX2-1, Length 653 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-205ENST00000546983 PUM3Q15397 648 aaKnown RBP31.59■■■□□ 2.65
NKX2-1-205ENST00000546983 MYO3BQ8WXR4 1341 aa31.58■■■□□ 2.65
NKX2-1-205ENST00000546983 USP17L3A6NCW0 530 aa31.58■■■□□ 2.65
NKX2-1-205ENST00000546983 USP17L4A6NCW7 530 aa31.58■■■□□ 2.65
NKX2-1-205ENST00000546983 ATP8B2P98198 1209 aa31.58■■■□□ 2.65
NKX2-1-205ENST00000546983 CAVIN4Q5BKX8 364 aa31.58■■■□□ 2.65
NKX2-1-205ENST00000546983 USP17L1Q7RTZ2 530 aa31.58■■■□□ 2.65
NKX2-1-205ENST00000546983 GPR101Q96P66 508 aaPredicted RBP31.58■■■□□ 2.65
NKX2-1-205ENST00000546983 SCN4AP35499 1836 aa31.58■■■□□ 2.65
NKX2-1-205ENST00000546983 VIL1P09327 827 aaKnown RBP31.57■■■□□ 2.64
NKX2-1-205ENST00000546983 FSTL1Q12841 308 aa31.57■■■□□ 2.64
NKX2-1-205ENST00000546983 AGBL3Q8NEM8 1001 aa31.57■■■□□ 2.64
NKX2-1-205ENST00000546983 COG6Q9Y2V7 657 aa31.57■■■□□ 2.64
NKX2-1-205ENST00000546983 ZNF609O15014 1411 aa31.57■■■□□ 2.64
NKX2-1-205ENST00000546983 POTECB2RU33 542 aa31.56■■■□□ 2.64
NKX2-1-205ENST00000546983 STRIP1Q5VSL9 837 aa31.56■■■□□ 2.64
NKX2-1-205ENST00000546983 VGLL2Q8N8G2 317 aa31.56■■■□□ 2.64
NKX2-1-205ENST00000546983 KLHDC4Q8TBB5 520 aa31.56■■■□□ 2.64
NKX2-1-205ENST00000546983 TAF1DQ9H5J8 278 aaPredicted RBP31.56■■■□□ 2.64
NKX2-1-205ENST00000546983 GPRC5DQ9NZD1 345 aa31.56■■■□□ 2.64
NKX2-1-205ENST00000546983 PSMD14O00487 310 aa31.55■■■□□ 2.64
NKX2-1-205ENST00000546983 EPHX2P34913 555 aa31.55■■■□□ 2.64
NKX2-1-205ENST00000546983 RPAP2Q8IXW5 612 aaPredicted RBP31.55■■■□□ 2.64
NKX2-1-205ENST00000546983 SMC1BQ8NDV3 1235 aa31.55■■■□□ 2.64
NKX2-1-205ENST00000546983 SSH3Q8TE77 659 aa31.55■■■□□ 2.64
NKX2-1-205ENST00000546983 LPIN2Q92539 896 aa31.55■■■□□ 2.64
NKX2-1-205ENST00000546983 AKAP2Q9Y2D5 859 aa31.55■■■□□ 2.64
NKX2-1-205ENST00000546983 H7C1D1 291 aa31.54■■■□□ 2.64
NKX2-1-205ENST00000546983 SLC5A1P13866 664 aa31.54■■■□□ 2.64
NKX2-1-205ENST00000546983 G3BP1Q13283 466 aaKnown RBP eCLIP31.54■■■□□ 2.64
NKX2-1-205ENST00000546983 USP50Q70EL3 339 aaPredicted RBP31.54■■■□□ 2.64
NKX2-1-205ENST00000546983 ATG9AQ7Z3C6 839 aa31.54■■■□□ 2.64
NKX2-1-205ENST00000546983 VPS37DQ86XT2 251 aa31.54■■■□□ 2.64
NKX2-1-205ENST00000546983 SIL1Q9H173 461 aa31.54■■■□□ 2.64
NKX2-1-205ENST00000546983 CD209Q9NNX6 404 aa31.54■■■□□ 2.64
NKX2-1-205ENST00000546983 HMMRO75330 724 aa31.53■■■□□ 2.64
NKX2-1-205ENST00000546983 IL1R1P14778 569 aa31.53■■■□□ 2.64
NKX2-1-205ENST00000546983 GMPSP49915 693 aaPredicted RBP31.53■■■□□ 2.64
NKX2-1-205ENST00000546983 SCNN1DP51172 638 aa31.53■■■□□ 2.64
NKX2-1-205ENST00000546983 C1QTNF8P60827 252 aa31.53■■■□□ 2.64
NKX2-1-205ENST00000546983 POLA2Q14181 598 aa31.53■■■□□ 2.64
NKX2-1-205ENST00000546983 ADARB2Q9NS39 739 aaKnown RBP31.53■■■□□ 2.64
NKX2-1-205ENST00000546983 IRS2Q9Y4H2 1338 aa31.52■■■□□ 2.64
NKX2-1-205ENST00000546983 HIBADHP31937 336 aaKnown RBP31.52■■■□□ 2.64
NKX2-1-205ENST00000546983 RRP1P56182 461 aaKnown RBP31.52■■■□□ 2.64
NKX2-1-205ENST00000546983 RSBN1LQ6PCB5 846 aaPredicted RBP31.52■■■□□ 2.64
NKX2-1-205ENST00000546983 LDHDQ86WU2 507 aa31.52■■■□□ 2.64
NKX2-1-205ENST00000546983 ZBTB40Q9NUA8 1239 aa31.52■■■□□ 2.64
NKX2-1-205ENST00000546983 TXNRD3Q86VQ6 643 aa31.51■■■□□ 2.63
NKX2-1-205ENST00000546983 HSP90AB4PQ58FF6 505 aa31.5■■■□□ 2.63
NKX2-1-205ENST00000546983 TTLL5Q6EMB2 1281 aa31.5■■■□□ 2.63
NKX2-1-205ENST00000546983 PNMA6EA0A0J9YXQ4 647 aa31.49■■■□□ 2.63
NKX2-1-205ENST00000546983 WTIPA6NIX2 430 aaPredicted RBP31.49■■■□□ 2.63
NKX2-1-205ENST00000546983 FGFR2P21802 821 aa31.49■■■□□ 2.63
NKX2-1-205ENST00000546983 FKBP1AP62942 108 aaKnown RBP31.49■■■□□ 2.63
NKX2-1-205ENST00000546983 CNOT7Q9UIV1 285 aaKnown RBP31.49■■■□□ 2.63
NKX2-1-205ENST00000546983 PA2G4Q9UQ80 394 aaKnown RBP31.49■■■□□ 2.63
NKX2-1-205ENST00000546983 SASH1O94885 1247 aa31.48■■■□□ 2.63
NKX2-1-205ENST00000546983 ATP2B3Q16720 1220 aa31.48■■■□□ 2.63
NKX2-1-205ENST00000546983 CEP85Q6P2H3 762 aa31.48■■■□□ 2.63
NKX2-1-205ENST00000546983 KLRK1P26718 216 aa31.47■■■□□ 2.63
NKX2-1-205ENST00000546983 FBXO33Q7Z6M2 555 aa31.47■■■□□ 2.63
NKX2-1-205ENST00000546983 OGFOD1Q8N543 542 aa31.47■■■□□ 2.63
NKX2-1-205ENST00000546983 FAM84BQ96KN1 310 aaPredicted RBP31.47■■■□□ 2.63
NKX2-1-205ENST00000546983 GNL3LQ9NVN8 582 aaKnown RBP31.47■■■□□ 2.63
NKX2-1-205ENST00000546983 SNAP23O00161 211 aa31.46■■■□□ 2.63
NKX2-1-205ENST00000546983 EPS15P42566 896 aa31.46■■■□□ 2.63
NKX2-1-205ENST00000546983 AAMPQ13685 434 aa31.46■■■□□ 2.63
NKX2-1-205ENST00000546983 ZC3H15Q8WU90 426 aaKnown RBP31.46■■■□□ 2.63
NKX2-1-205ENST00000546983 C1orf115Q9H7X2 142 aa31.46■■■□□ 2.63
NKX2-1-205ENST00000546983 NOP58Q9Y2X3 529 aaKnown RBP31.46■■■□□ 2.63
NKX2-1-205ENST00000546983 A0A1B0GUL6 1792 aa31.45■■■□□ 2.63
NKX2-1-205ENST00000546983 ZBTB22O15209 634 aa31.45■■■□□ 2.63
NKX2-1-205ENST00000546983 OS9Q13438 667 aaPredicted RBP31.45■■■□□ 2.63
NKX2-1-205ENST00000546983 CHADLQ6NUI6 762 aa31.45■■■□□ 2.63
NKX2-1-205ENST00000546983 ERC1Q8IUD2 1116 aa31.45■■■□□ 2.63
NKX2-1-205ENST00000546983 MICALL2Q8IY33 904 aa31.45■■■□□ 2.63
NKX2-1-205ENST00000546983 TDRD7Q8NHU6 1098 aaKnown RBP31.45■■■□□ 2.63
NKX2-1-205ENST00000546983 KCNQ5Q9NR82 932 aa31.45■■■□□ 2.63
NKX2-1-205ENST00000546983 FRAT2O75474 233 aaPredicted RBP31.44■■■□□ 2.62
NKX2-1-205ENST00000546983 EAPPQ56P03 285 aaPredicted RBP31.44■■■□□ 2.62
NKX2-1-205ENST00000546983 DACT2Q5SW24 774 aa31.44■■■□□ 2.62
NKX2-1-205ENST00000546983 HDAC9Q9UKV0 1011 aa31.44■■■□□ 2.62
NKX2-1-205ENST00000546983 SURF6O75683 361 aaKnown RBP31.43■■■□□ 2.62
NKX2-1-205ENST00000546983 USP17L8P0C7I0 530 aa31.43■■■□□ 2.62
NKX2-1-205ENST00000546983 GTF2IP78347 998 aa31.43■■■□□ 2.62
NKX2-1-205ENST00000546983 C20orf194Q5TEA3 1177 aa31.43■■■□□ 2.62
NKX2-1-205ENST00000546983 TBC1D22AQ8WUA7 517 aa31.43■■■□□ 2.62
NKX2-1-205ENST00000546983 FBXW7Q969H0 707 aa31.43■■■□□ 2.62
NKX2-1-205ENST00000546983 GPR108Q9NPR9 543 aa31.43■■■□□ 2.62
NKX2-1-205ENST00000546983 ZBTB12Q9Y330 459 aaPredicted RBP31.43■■■□□ 2.62
NKX2-1-205ENST00000546983 FAM205AQ6ZU69 1335 aa31.43■■■□□ 2.62
NKX2-1-205ENST00000546983 GYG1P46976 350 aa31.42■■■□□ 2.62
NKX2-1-205ENST00000546983 GMLQ99445 158 aa31.42■■■□□ 2.62
NKX2-1-205ENST00000546983 CLEC11AQ9Y240 323 aa31.42■■■□□ 2.62
NKX2-1-205ENST00000546983 SEMA3EO15041 775 aa31.41■■■□□ 2.62
NKX2-1-205ENST00000546983 ZNF280AP59817 542 aaPredicted RBP31.41■■■□□ 2.62
NKX2-1-205ENST00000546983 TFCP2Q12800 502 aa31.39■■■□□ 2.62
NKX2-1-205ENST00000546983 PSME4Q14997 1843 aa31.38■■■□□ 2.61
NKX2-1-205ENST00000546983 SUGT1Q9Y2Z0 365 aa31.37■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms