RNA–Protein interactions for RNA: ENST00000542661.1

DDX11-221, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-221ENST00000542661 SIL1Q9H173 461 aa17.62■□□□□ 0.41
DDX11-221ENST00000542661 SCN4AP35499 1836 aa17.62■□□□□ 0.41
DDX11-221ENST00000542661 POTECB2RU33 542 aa17.61■□□□□ 0.41
DDX11-221ENST00000542661 PUM3Q15397 648 aaKnown RBP17.61■□□□□ 0.41
DDX11-221ENST00000542661 C20orf194Q5TEA3 1177 aa17.61■□□□□ 0.41
DDX11-221ENST00000542661 VGLL2Q8N8G2 317 aa17.61■□□□□ 0.41
DDX11-221ENST00000542661 C1orf115Q9H7X2 142 aa17.61■□□□□ 0.41
DDX11-221ENST00000542661 ZBTB40Q9NUA8 1239 aa17.61■□□□□ 0.41
DDX11-221ENST00000542661 CEP126Q9P2H0 1117 aa17.61■□□□□ 0.41
DDX11-221ENST00000542661 HACL1Q9UJ83 578 aa17.61■□□□□ 0.41
DDX11-221ENST00000542661 PA2G4Q9UQ80 394 aaKnown RBP17.61■□□□□ 0.41
DDX11-221ENST00000542661 PNMA6EA0A0J9YXQ4 647 aa17.6■□□□□ 0.41
DDX11-221ENST00000542661 SNAP23O00161 211 aa17.6■□□□□ 0.41
DDX11-221ENST00000542661 PSMD14O00487 310 aa17.6■□□□□ 0.41
DDX11-221ENST00000542661 RPS12P25398 132 aaKnown RBP17.6■□□□□ 0.41
DDX11-221ENST00000542661 KLRK1P26718 216 aa17.6■□□□□ 0.41
DDX11-221ENST00000542661 POLA2Q14181 598 aa17.6■□□□□ 0.41
DDX11-221ENST00000542661 TXNRD3Q86VQ6 643 aa17.6■□□□□ 0.41
DDX11-221ENST00000542661 SSH3Q8TE77 659 aa17.6■□□□□ 0.41
DDX11-221ENST00000542661 IRS2Q9Y4H2 1338 aa17.6■□□□□ 0.41
DDX11-221ENST00000542661 USP17L3A6NCW0 530 aa17.59■□□□□ 0.41
DDX11-221ENST00000542661 USP17L4A6NCW7 530 aa17.59■□□□□ 0.41
DDX11-221ENST00000542661 TOMM70O94826 608 aa17.59■□□□□ 0.41
DDX11-221ENST00000542661 VIL1P09327 827 aaKnown RBP17.59■□□□□ 0.41
DDX11-221ENST00000542661 USP17L1Q7RTZ2 530 aa17.59■□□□□ 0.41
DDX11-221ENST00000542661 DPF2Q92785 391 aa17.59■□□□□ 0.41
DDX11-221ENST00000542661 IFIT1P09914 478 aaKnown RBP17.58■□□□□ 0.4
DDX11-221ENST00000542661 GMPSP49915 693 aaPredicted RBP17.58■□□□□ 0.4
DDX11-221ENST00000542661 SCNN1DP51172 638 aa17.58■□□□□ 0.4
DDX11-221ENST00000542661 G3BP1Q13283 466 aaKnown RBP eCLIP17.58■□□□□ 0.4
DDX11-221ENST00000542661 CAVIN4Q5BKX8 364 aa17.58■□□□□ 0.4
DDX11-221ENST00000542661 CEP85Q6P2H3 762 aa17.58■□□□□ 0.4
DDX11-221ENST00000542661 PNMA8AQ86V59 439 aaPredicted RBP17.58■□□□□ 0.4
DDX11-221ENST00000542661 RPAP2Q8IXW5 612 aaPredicted RBP17.58■□□□□ 0.4
DDX11-221ENST00000542661 LPIN2Q92539 896 aa17.58■□□□□ 0.4
DDX11-221ENST00000542661 TAF1DQ9H5J8 278 aaPredicted RBP17.58■□□□□ 0.4
DDX11-221ENST00000542661 CD209Q9NNX6 404 aa17.58■□□□□ 0.4
DDX11-221ENST00000542661 KCNQ5Q9NR82 932 aa17.58■□□□□ 0.4
DDX11-221ENST00000542661 GPRC5DQ9NZD1 345 aa17.58■□□□□ 0.4
DDX11-221ENST00000542661 SCN9AQ15858 1988 aa17.58■□□□□ 0.4
DDX11-221ENST00000542661 PSME4Q14997 1843 aa17.57■□□□□ 0.4
DDX11-221ENST00000542661 SLC5A1P13866 664 aa17.57■□□□□ 0.4
DDX11-221ENST00000542661 IL1R1P14778 569 aa17.57■□□□□ 0.4
DDX11-221ENST00000542661 FGFR2P21802 821 aa17.57■□□□□ 0.4
DDX11-221ENST00000542661 HIBADHP31937 336 aaKnown RBP17.57■□□□□ 0.4
DDX11-221ENST00000542661 EPHX2P34913 555 aa17.57■□□□□ 0.4
DDX11-221ENST00000542661 STRIP1Q5VSL9 837 aa17.57■□□□□ 0.4
DDX11-221ENST00000542661 VPS37DQ86XT2 251 aa17.57■□□□□ 0.4
DDX11-221ENST00000542661 RBM46Q8TBY0 533 aaKnown RBP17.57■□□□□ 0.4
DDX11-221ENST00000542661 HMMRO75330 724 aa17.56■□□□□ 0.4
DDX11-221ENST00000542661 RSBN1LQ6PCB5 846 aaPredicted RBP17.56■□□□□ 0.4
DDX11-221ENST00000542661 AGBL3Q8NEM8 1001 aa17.56■□□□□ 0.4
DDX11-221ENST00000542661 FAM84BQ96KN1 310 aaPredicted RBP17.56■□□□□ 0.4
DDX11-221ENST00000542661 AKAP2Q9Y2D5 859 aa17.56■□□□□ 0.4
DDX11-221ENST00000542661 ZNF609O15014 1411 aa17.55■□□□□ 0.4
DDX11-221ENST00000542661 MYO3BQ8WXR4 1341 aa17.55■□□□□ 0.4
DDX11-221ENST00000542661 H7C1D1 291 aa17.55■□□□□ 0.4
DDX11-221ENST00000542661 OS9Q13438 667 aaPredicted RBP17.55■□□□□ 0.4
DDX11-221ENST00000542661 ATP2B3Q16720 1220 aa17.55■□□□□ 0.4
DDX11-221ENST00000542661 TTLL5Q6EMB2 1281 aa17.55■□□□□ 0.4
DDX11-221ENST00000542661 FBXO33Q7Z6M2 555 aa17.55■□□□□ 0.4
DDX11-221ENST00000542661 ADARB2Q9NS39 739 aaKnown RBP17.55■□□□□ 0.4
DDX11-221ENST00000542661 CNOT7Q9UIV1 285 aaKnown RBP17.55■□□□□ 0.4
DDX11-221ENST00000542661 SURF6O75683 361 aaKnown RBP17.54■□□□□ 0.4
DDX11-221ENST00000542661 SASH1O94885 1247 aa17.54■□□□□ 0.4
DDX11-221ENST00000542661 EPS15P42566 896 aa17.54■□□□□ 0.4
DDX11-221ENST00000542661 GYG1P46976 350 aa17.54■□□□□ 0.4
DDX11-221ENST00000542661 MMP14P50281 582 aa17.54■□□□□ 0.4
DDX11-221ENST00000542661 FSTL1Q12841 308 aa17.54■□□□□ 0.4
DDX11-221ENST00000542661 DACT2Q5SW24 774 aa17.54■□□□□ 0.4
DDX11-221ENST00000542661 USP50Q70EL3 339 aaPredicted RBP17.54■□□□□ 0.4
DDX11-221ENST00000542661 SMC1BQ8NDV3 1235 aa17.54■□□□□ 0.4
DDX11-221ENST00000542661 FBXW7Q969H0 707 aa17.54■□□□□ 0.4
DDX11-221ENST00000542661 NOP58Q9Y2X3 529 aaKnown RBP17.54■□□□□ 0.4
DDX11-221ENST00000542661 ZBTB12Q9Y330 459 aaPredicted RBP17.54■□□□□ 0.4
DDX11-221ENST00000542661 GTF2IP78347 998 aa17.53■□□□□ 0.4
DDX11-221ENST00000542661 TFCP2Q12800 502 aa17.53■□□□□ 0.4
DDX11-221ENST00000542661 EAPPQ56P03 285 aaPredicted RBP17.53■□□□□ 0.4
DDX11-221ENST00000542661 HSP90AB4PQ58FF6 505 aa17.53■□□□□ 0.4
DDX11-221ENST00000542661 LDHDQ86WU2 507 aa17.53■□□□□ 0.4
DDX11-221ENST00000542661 MICALL2Q8IY33 904 aa17.53■□□□□ 0.4
DDX11-221ENST00000542661 TDRD7Q8NHU6 1098 aaKnown RBP17.53■□□□□ 0.4
DDX11-221ENST00000542661 GMLQ99445 158 aa17.52■□□□□ 0.4
DDX11-221ENST00000542661 FAM205AQ6ZU69 1335 aa17.51■□□□□ 0.39
DDX11-221ENST00000542661 FRAT2O75474 233 aaPredicted RBP17.51■□□□□ 0.39
DDX11-221ENST00000542661 USP17L8P0C7I0 530 aa17.51■□□□□ 0.39
DDX11-221ENST00000542661 BCAMP50895 628 aa17.51■□□□□ 0.39
DDX11-221ENST00000542661 FKBP1AP62942 108 aaKnown RBP17.51■□□□□ 0.39
DDX11-221ENST00000542661 CHADLQ6NUI6 762 aa17.51■□□□□ 0.39
DDX11-221ENST00000542661 ERC1Q8IUD2 1116 aa17.51■□□□□ 0.39
DDX11-221ENST00000542661 OGFOD1Q8N543 542 aa17.51■□□□□ 0.39
DDX11-221ENST00000542661 GNL3LQ9NVN8 582 aaKnown RBP17.51■□□□□ 0.39
DDX11-221ENST00000542661 ZNF280AP59817 542 aaPredicted RBP17.5■□□□□ 0.39
DDX11-221ENST00000542661 AAMPQ13685 434 aa17.5■□□□□ 0.39
DDX11-221ENST00000542661 GPR108Q9NPR9 543 aa17.5■□□□□ 0.39
DDX11-221ENST00000542661 CLEC11AQ9Y240 323 aa17.5■□□□□ 0.39
DDX11-221ENST00000542661 A0A1B0GUL7 405 aa17.49■□□□□ 0.39
DDX11-221ENST00000542661 TIMM10P62072 90 aa17.49■□□□□ 0.39
DDX11-221ENST00000542661 SIRT2Q8IXJ6 389 aa17.49■□□□□ 0.39
DDX11-221ENST00000542661 ZC3H15Q8WU90 426 aaKnown RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms