RNA–Protein interactions for RNA: ENST00000542136.1

TNFSF13B-206, Transcript of TNF superfamily member 13b, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13B, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-206ENST00000542136 MVPQ14764 893 aaKnown RBP17.15■□□□□ 0.34
TNFSF13B-206ENST00000542136 LRRC24Q50LG9 513 aa17.15■□□□□ 0.34
TNFSF13B-206ENST00000542136 ATG9AQ7Z3C6 839 aa17.15■□□□□ 0.34
TNFSF13B-206ENST00000542136 TXNRD3Q86VQ6 643 aa17.15■□□□□ 0.34
TNFSF13B-206ENST00000542136 PANK1Q8TE04 598 aa17.15■□□□□ 0.34
TNFSF13B-206ENST00000542136 GPR101Q96P66 508 aaPredicted RBP17.15■□□□□ 0.34
TNFSF13B-206ENST00000542136 GPRC5DQ9NZD1 345 aa17.15■□□□□ 0.34
TNFSF13B-206ENST00000542136 DDX19BQ9UMR2 479 aa17.15■□□□□ 0.34
TNFSF13B-206ENST00000542136 A0A1B0GUL6 1792 aa17.15■□□□□ 0.34
TNFSF13B-206ENST00000542136 USP17L3A6NCW0 530 aa17.14■□□□□ 0.33
TNFSF13B-206ENST00000542136 USP17L4A6NCW7 530 aa17.14■□□□□ 0.33
TNFSF13B-206ENST00000542136 PSMD14O00487 310 aa17.14■□□□□ 0.33
TNFSF13B-206ENST00000542136 EPHX2P34913 555 aa17.14■□□□□ 0.33
TNFSF13B-206ENST00000542136 IL15P40933 162 aaPredicted RBP17.14■□□□□ 0.33
TNFSF13B-206ENST00000542136 ATP8B2P98198 1209 aa17.14■□□□□ 0.33
TNFSF13B-206ENST00000542136 METTL24Q5JXM2 366 aa17.14■□□□□ 0.33
TNFSF13B-206ENST00000542136 USP50Q70EL3 339 aaPredicted RBP17.14■□□□□ 0.33
TNFSF13B-206ENST00000542136 USP17L1Q7RTZ2 530 aa17.14■□□□□ 0.33
TNFSF13B-206ENST00000542136 ZNF804AQ7Z570 1209 aa17.14■□□□□ 0.33
TNFSF13B-206ENST00000542136 AGBL3Q8NEM8 1001 aa17.14■□□□□ 0.33
TNFSF13B-206ENST00000542136 YTHDC1Q96MU7 727 aaKnown RBP17.14■□□□□ 0.33
TNFSF13B-206ENST00000542136 PLIN1O60240 522 aa17.13■□□□□ 0.33
TNFSF13B-206ENST00000542136 IL1R1P14778 569 aa17.13■□□□□ 0.33
TNFSF13B-206ENST00000542136 GMPSP49915 693 aaPredicted RBP17.13■□□□□ 0.33
TNFSF13B-206ENST00000542136 POLA2Q14181 598 aa17.13■□□□□ 0.33
TNFSF13B-206ENST00000542136 STRIP1Q5VSL9 837 aa17.13■□□□□ 0.33
TNFSF13B-206ENST00000542136 SMC1BQ8NDV3 1235 aa17.13■□□□□ 0.33
TNFSF13B-206ENST00000542136 KLHDC4Q8TBB5 520 aa17.13■□□□□ 0.33
TNFSF13B-206ENST00000542136 SSH3Q8TE77 659 aa17.13■□□□□ 0.33
TNFSF13B-206ENST00000542136 KCNQ5Q9NR82 932 aa17.13■□□□□ 0.33
TNFSF13B-206ENST00000542136 PSME4Q14997 1843 aa17.12■□□□□ 0.33
TNFSF13B-206ENST00000542136 ZBTB22O15209 634 aa17.12■□□□□ 0.33
TNFSF13B-206ENST00000542136 FGFR2P21802 821 aa17.12■□□□□ 0.33
TNFSF13B-206ENST00000542136 PUM3Q15397 648 aaKnown RBP17.12■□□□□ 0.33
TNFSF13B-206ENST00000542136 LDHDQ86WU2 507 aa17.12■□□□□ 0.33
TNFSF13B-206ENST00000542136 GMLQ99445 158 aa17.12■□□□□ 0.33
TNFSF13B-206ENST00000542136 CD209Q9NNX6 404 aa17.12■□□□□ 0.33
TNFSF13B-206ENST00000542136 ADARB2Q9NS39 739 aaKnown RBP17.12■□□□□ 0.33
TNFSF13B-206ENST00000542136 CEP126Q9P2H0 1117 aa17.12■□□□□ 0.33
TNFSF13B-206ENST00000542136 MYO3BQ8WXR4 1341 aa17.12■□□□□ 0.33
TNFSF13B-206ENST00000542136 H7C1D1 291 aa17.11■□□□□ 0.33
TNFSF13B-206ENST00000542136 SNAP23O00161 211 aa17.11■□□□□ 0.33
TNFSF13B-206ENST00000542136 EPS15P42566 896 aa17.11■□□□□ 0.33
TNFSF13B-206ENST00000542136 RSBN1LQ6PCB5 846 aaPredicted RBP17.11■□□□□ 0.33
TNFSF13B-206ENST00000542136 FBXO33Q7Z6M2 555 aa17.11■□□□□ 0.33
TNFSF13B-206ENST00000542136 LPIN2Q92539 896 aa17.11■□□□□ 0.33
TNFSF13B-206ENST00000542136 ZBTB40Q9NUA8 1239 aa17.11■□□□□ 0.33
TNFSF13B-206ENST00000542136 CNOT7Q9UIV1 285 aaKnown RBP17.11■□□□□ 0.33
TNFSF13B-206ENST00000542136 SCN9AQ15858 1988 aa17.1■□□□□ 0.33
TNFSF13B-206ENST00000542136 PNMA6EA0A0J9YXQ4 647 aa17.1■□□□□ 0.33
TNFSF13B-206ENST00000542136 SASH1O94885 1247 aa17.1■□□□□ 0.33
TNFSF13B-206ENST00000542136 IFIT1P09914 478 aaKnown RBP17.1■□□□□ 0.33
TNFSF13B-206ENST00000542136 KLRK1P26718 216 aa17.1■□□□□ 0.33
TNFSF13B-206ENST00000542136 HIBADHP31937 336 aaKnown RBP17.1■□□□□ 0.33
TNFSF13B-206ENST00000542136 FKBP1AP62942 108 aaKnown RBP17.1■□□□□ 0.33
TNFSF13B-206ENST00000542136 CAVIN4Q5BKX8 364 aa17.1■□□□□ 0.33
TNFSF13B-206ENST00000542136 DACT2Q5SW24 774 aa17.1■□□□□ 0.33
TNFSF13B-206ENST00000542136 CHADLQ6NUI6 762 aa17.1■□□□□ 0.33
TNFSF13B-206ENST00000542136 TDRD7Q8NHU6 1098 aaKnown RBP17.1■□□□□ 0.33
TNFSF13B-206ENST00000542136 ZC3H15Q8WU90 426 aaKnown RBP17.1■□□□□ 0.33
TNFSF13B-206ENST00000542136 FAM84BQ96KN1 310 aaPredicted RBP17.1■□□□□ 0.33
TNFSF13B-206ENST00000542136 PGAP2Q9UHJ9 254 aa17.1■□□□□ 0.33
TNFSF13B-206ENST00000542136 TTLL5Q6EMB2 1281 aa17.09■□□□□ 0.33
TNFSF13B-206ENST00000542136 RPAP2Q8IXW5 612 aaPredicted RBP17.09■□□□□ 0.33
TNFSF13B-206ENST00000542136 AKAP2Q9Y2D5 859 aa17.09■□□□□ 0.33
TNFSF13B-206ENST00000542136 COG6Q9Y2V7 657 aa17.09■□□□□ 0.33
TNFSF13B-206ENST00000542136 FAM205AQ6ZU69 1335 aa17.08■□□□□ 0.32
TNFSF13B-206ENST00000542136 ZNF280AP59817 542 aaPredicted RBP17.08■□□□□ 0.32
TNFSF13B-206ENST00000542136 SIL1Q9H173 461 aa17.08■□□□□ 0.32
TNFSF13B-206ENST00000542136 PA2G4Q9UQ80 394 aaKnown RBP17.08■□□□□ 0.32
TNFSF13B-206ENST00000542136 NOP58Q9Y2X3 529 aaKnown RBP17.08■□□□□ 0.32
TNFSF13B-206ENST00000542136 ZBTB12Q9Y330 459 aaPredicted RBP17.08■□□□□ 0.32
TNFSF13B-206ENST00000542136 ADAMTSL1Q8N6G6 1762 aa17.07■□□□□ 0.32
TNFSF13B-206ENST00000542136 SLC5A1P13866 664 aa17.07■□□□□ 0.32
TNFSF13B-206ENST00000542136 G3BP1Q13283 466 aaKnown RBP eCLIP17.07■□□□□ 0.32
TNFSF13B-206ENST00000542136 CEP85Q6P2H3 762 aa17.07■□□□□ 0.32
TNFSF13B-206ENST00000542136 MICALL2Q8IY33 904 aa17.07■□□□□ 0.32
TNFSF13B-206ENST00000542136 USP17L8P0C7I0 530 aa17.06■□□□□ 0.32
TNFSF13B-206ENST00000542136 ATP2B3Q16720 1220 aa17.06■□□□□ 0.32
TNFSF13B-206ENST00000542136 VPS37DQ86XT2 251 aa17.06■□□□□ 0.32
TNFSF13B-206ENST00000542136 OGFOD1Q8N543 542 aa17.06■□□□□ 0.32
TNFSF13B-206ENST00000542136 HSPA6P17066 643 aa17.05■□□□□ 0.32
TNFSF13B-206ENST00000542136 GYG1P46976 350 aa17.05■□□□□ 0.32
TNFSF13B-206ENST00000542136 RRP1P56182 461 aaKnown RBP17.05■□□□□ 0.32
TNFSF13B-206ENST00000542136 GTF2IP78347 998 aa17.05■□□□□ 0.32
TNFSF13B-206ENST00000542136 EAPPQ56P03 285 aaPredicted RBP17.05■□□□□ 0.32
TNFSF13B-206ENST00000542136 C20orf194Q5TEA3 1177 aa17.05■□□□□ 0.32
TNFSF13B-206ENST00000542136 GPR108Q9NPR9 543 aa17.05■□□□□ 0.32
TNFSF13B-206ENST00000542136 ZNF646O15015 1829 aaPredicted RBP17.05■□□□□ 0.32
TNFSF13B-206ENST00000542136 POTEIP0CG38 1075 aa17.04■□□□□ 0.32
TNFSF13B-206ENST00000542136 POTEJP0CG39 1038 aa17.04■□□□□ 0.32
TNFSF13B-206ENST00000542136 SEMA3EO15041 775 aa17.03■□□□□ 0.32
TNFSF13B-206ENST00000542136 HMMRO75330 724 aa17.03■□□□□ 0.32
TNFSF13B-206ENST00000542136 SURF6O75683 361 aaKnown RBP17.03■□□□□ 0.32
TNFSF13B-206ENST00000542136 ITGBL1O95965 494 aaPredicted RBP17.03■□□□□ 0.32
TNFSF13B-206ENST00000542136 HIRAP54198 1017 aaPredicted RBP17.03■□□□□ 0.32
TNFSF13B-206ENST00000542136 TFCP2Q12800 502 aa17.03■□□□□ 0.32
TNFSF13B-206ENST00000542136 HSP90AB4PQ58FF6 505 aa17.03■□□□□ 0.32
TNFSF13B-206ENST00000542136 TBC1D22AQ8WUA7 517 aa17.03■□□□□ 0.32
TNFSF13B-206ENST00000542136 C1orf115Q9H7X2 142 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms