RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 APBB1O00213 710 aa8.09□□□□□ -1.11
CD44-214ENST00000525211 NFKBIEO00221 500 aa8.09□□□□□ -1.11
CD44-214ENST00000525211 SMARCA5O60264 1052 aaPredicted RBP8.09□□□□□ -1.11
CD44-214ENST00000525211 CHRNDQ07001 517 aa8.09□□□□□ -1.11
CD44-214ENST00000525211 MKRN3Q13064 507 aaKnown RBP8.09□□□□□ -1.11
CD44-214ENST00000525211 CCDC57Q2TAC2 916 aa8.09□□□□□ -1.11
CD44-214ENST00000525211 ANKRD18AQ8IVF6 992 aa8.09□□□□□ -1.11
CD44-214ENST00000525211 PELP1Q8IZL8 1130 aaKnown RBP8.09□□□□□ -1.11
CD44-214ENST00000525211 VGLL2Q8N8G2 317 aa8.09□□□□□ -1.11
CD44-214ENST00000525211 BMP2KQ9NSY1 1161 aaPredicted RBP8.09□□□□□ -1.11
CD44-214ENST00000525211 POLLQ9UGP5 575 aa8.09□□□□□ -1.11
CD44-214ENST00000525211 ATP6V0A2Q9Y487 856 aa8.09□□□□□ -1.11
CD44-214ENST00000525211 EYA2O00167 538 aa8.08□□□□□ -1.12
CD44-214ENST00000525211 TFCP2Q12800 502 aa8.08□□□□□ -1.12
CD44-214ENST00000525211 DALRD3Q5D0E6 543 aaKnown RBP8.08□□□□□ -1.12
CD44-214ENST00000525211 LDHAL6AQ6ZMR3 332 aa8.08□□□□□ -1.12
CD44-214ENST00000525211 RPAP2Q8IXW5 612 aaPredicted RBP8.08□□□□□ -1.12
CD44-214ENST00000525211 C16orf71Q8IYS4 520 aaPredicted RBP8.08□□□□□ -1.12
CD44-214ENST00000525211 CNKSR1Q969H4 720 aa8.08□□□□□ -1.12
CD44-214ENST00000525211 COPRSQ9NQ92 184 aa8.08□□□□□ -1.12
CD44-214ENST00000525211 BSDC1Q9NW68 430 aaPredicted RBP8.08□□□□□ -1.12
CD44-214ENST00000525211 TLR7Q9NYK1 1049 aaKnown RBP8.08□□□□□ -1.12
CD44-214ENST00000525211 NOP58Q9Y2X3 529 aaKnown RBP8.08□□□□□ -1.12
CD44-214ENST00000525211 LRRC37AA6NMS7 1700 aa8.08□□□□□ -1.12
CD44-214ENST00000525211 LTBP1Q14766 1721 aa8.08□□□□□ -1.12
CD44-214ENST00000525211 A0A1B0GUL6 1792 aa8.07□□□□□ -1.12
CD44-214ENST00000525211 SURF6O75683 361 aaKnown RBP8.07□□□□□ -1.12
CD44-214ENST00000525211 BBOX1O75936 387 aa8.07□□□□□ -1.12
CD44-214ENST00000525211 FGFR2P21802 821 aa8.07□□□□□ -1.12
CD44-214ENST00000525211 ADORA1P30542 326 aa8.07□□□□□ -1.12
CD44-214ENST00000525211 B4GALNT3Q6L9W6 998 aa8.07□□□□□ -1.12
CD44-214ENST00000525211 SP8Q8IXZ3 490 aa8.07□□□□□ -1.12
CD44-214ENST00000525211 OTUD7AQ8TE49 926 aaPredicted RBP8.07□□□□□ -1.12
CD44-214ENST00000525211 CDC5LQ99459 802 aaKnown RBP8.07□□□□□ -1.12
CD44-214ENST00000525211 IL1RAPL2Q9NP60 686 aa8.07□□□□□ -1.12
CD44-214ENST00000525211 ZNF277Q9NRM2 450 aaPredicted RBP8.07□□□□□ -1.12
CD44-214ENST00000525211 ALDH1B1P30837 517 aa8.06□□□□□ -1.12
CD44-214ENST00000525211 IGHMBP2P38935 993 aaKnown RBP8.06□□□□□ -1.12
CD44-214ENST00000525211 TIMM10P62072 90 aa8.06□□□□□ -1.12
CD44-214ENST00000525211 HDAC1Q13547 482 aaPredicted RBP8.06□□□□□ -1.12
CD44-214ENST00000525211 TAF7LQ5H9L4 462 aa8.06□□□□□ -1.12
CD44-214ENST00000525211 TBC1D16Q8TBP0 767 aa8.06□□□□□ -1.12
CD44-214ENST00000525211 KCNV2Q8TDN2 545 aa8.06□□□□□ -1.12
CD44-214ENST00000525211 BCL11AQ9H165 835 aa8.06□□□□□ -1.12
CD44-214ENST00000525211 DCTPP1Q9H773 170 aa8.06□□□□□ -1.12
CD44-214ENST00000525211 KCNQ5Q9NR82 932 aa8.06□□□□□ -1.12
CD44-214ENST00000525211 CNNM1Q9NRU3 951 aa8.06□□□□□ -1.12
CD44-214ENST00000525211 KDM2BQ8NHM5 1336 aa8.05□□□□□ -1.12
CD44-214ENST00000525211 RIMBP2O15034 1052 aa8.05□□□□□ -1.12
CD44-214ENST00000525211 CIAO1O76071 339 aa8.05□□□□□ -1.12
CD44-214ENST00000525211 HSP90B1P14625 803 aaKnown RBP8.05□□□□□ -1.12
CD44-214ENST00000525211 AOC3Q16853 763 aa8.05□□□□□ -1.12
CD44-214ENST00000525211 METTL24Q5JXM2 366 aa8.05□□□□□ -1.12
CD44-214ENST00000525211 ARHGAP27Q6ZUM4 889 aa8.05□□□□□ -1.12
CD44-214ENST00000525211 MPNDQ8N594 471 aa8.05□□□□□ -1.12
CD44-214ENST00000525211 EAF2Q96CJ1 260 aaPredicted RBP8.05□□□□□ -1.12
CD44-214ENST00000525211 MPHOSPH8Q99549 860 aa8.05□□□□□ -1.12
CD44-214ENST00000525211 PODXL2Q9NZ53 605 aa8.05□□□□□ -1.12
CD44-214ENST00000525211 NSFL1CQ9UNZ2 370 aaKnown RBP8.05□□□□□ -1.12
CD44-214ENST00000525211 PDZRN3Q9UPQ7 1066 aa8.05□□□□□ -1.12
CD44-214ENST00000525211 FER1L6Q2WGJ9 1857 aa8.04□□□□□ -1.12
CD44-214ENST00000525211 ARFGEF1Q9Y6D6 1849 aa8.04□□□□□ -1.12
CD44-214ENST00000525211 YDJCA8MPS7 323 aa8.04□□□□□ -1.12
CD44-214ENST00000525211 UFL1O94874 794 aa8.04□□□□□ -1.12
CD44-214ENST00000525211 PDE4AP27815 886 aa8.04□□□□□ -1.12
CD44-214ENST00000525211 GYG1P46976 350 aa8.04□□□□□ -1.12
CD44-214ENST00000525211 FKBP4Q02790 459 aaKnown RBP eCLIP8.04□□□□□ -1.12
CD44-214ENST00000525211 GPR162Q16538 588 aa8.04□□□□□ -1.12
CD44-214ENST00000525211 DOK7Q18PE1 504 aa8.04□□□□□ -1.12
CD44-214ENST00000525211 CCDC93Q567U6 631 aa8.04□□□□□ -1.12
CD44-214ENST00000525211 TSHZ3Q63HK5 1081 aa8.04□□□□□ -1.12
CD44-214ENST00000525211 RHPN1Q8TCX5 695 aa8.04□□□□□ -1.12
CD44-214ENST00000525211 DBNDD2Q9BQY9 259 aa8.04□□□□□ -1.12
CD44-214ENST00000525211 RTFDC1Q9BY42 306 aaPredicted RBP8.04□□□□□ -1.12
CD44-214ENST00000525211 CCDC8Q9H0W5 538 aaPredicted RBP8.04□□□□□ -1.12
CD44-214ENST00000525211 ZNF609O15014 1411 aa8.03□□□□□ -1.12
CD44-214ENST00000525211 COL1A1P02452 1464 aaPredicted RBP8.03□□□□□ -1.12
CD44-214ENST00000525211 A0A1B0GUL7 405 aa8.03□□□□□ -1.12
CD44-214ENST00000525211 C6orf229H3BNL8 230 aa8.03□□□□□ -1.12
CD44-214ENST00000525211 PDE8BO95263 885 aa8.03□□□□□ -1.12
CD44-214ENST00000525211 IL15P40933 162 aaPredicted RBP8.03□□□□□ -1.12
CD44-214ENST00000525211 PHKA1P46020 1223 aa8.03□□□□□ -1.12
CD44-214ENST00000525211 BCAMP50895 628 aa8.03□□□□□ -1.12
CD44-214ENST00000525211 G3BP1Q13283 466 aaKnown RBP eCLIP8.03□□□□□ -1.12
CD44-214ENST00000525211 SCARF1Q14162 830 aa8.03□□□□□ -1.12
CD44-214ENST00000525211 TNNI3KQ59H18 835 aa8.03□□□□□ -1.12
CD44-214ENST00000525211 DPP8Q6V1X1 898 aaPredicted RBP8.03□□□□□ -1.12
CD44-214ENST00000525211 SMC5Q8IY18 1101 aa8.03□□□□□ -1.12
CD44-214ENST00000525211 FAM84BQ96KN1 310 aaPredicted RBP8.03□□□□□ -1.12
CD44-214ENST00000525211 MXD3Q9BW11 206 aa8.03□□□□□ -1.12
CD44-214ENST00000525211 DBNDD1Q9H9R9 158 aa8.03□□□□□ -1.12
CD44-214ENST00000525211 ANKIB1Q9P2G1 1089 aa8.03□□□□□ -1.12
CD44-214ENST00000525211 CEP126Q9P2H0 1117 aa8.03□□□□□ -1.12
CD44-214ENST00000525211 DBNLQ9UJU6 430 aaKnown RBP8.03□□□□□ -1.12
CD44-214ENST00000525211 GGA1Q9UJY5 639 aa8.03□□□□□ -1.12
CD44-214ENST00000525211 IQSEC3Q9UPP2 1182 aaPredicted RBP8.03□□□□□ -1.12
CD44-214ENST00000525211 HDAC5Q9UQL6 1122 aa8.03□□□□□ -1.12
CD44-214ENST00000525211 JAG2Q9Y219 1238 aa8.03□□□□□ -1.12
CD44-214ENST00000525211 NDUFB9Q9Y6M9 179 aa8.03□□□□□ -1.12
CD44-214ENST00000525211 FPGT-TNNI3KV9GXZ4 949 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms