RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 IRS2Q9Y4H2 1338 aa15.63■□□□□ 0.09
VEGFA-225ENST00000523950 PLIN1O60240 522 aa15.62■□□□□ 0.09
VEGFA-225ENST00000523950 CENPBP07199 599 aaPredicted RBP15.62■□□□□ 0.09
VEGFA-225ENST00000523950 IL15P40933 162 aaPredicted RBP15.62■□□□□ 0.09
VEGFA-225ENST00000523950 SCNN1DP51172 638 aa15.62■□□□□ 0.09
VEGFA-225ENST00000523950 VGLL2Q8N8G2 317 aa15.62■□□□□ 0.09
VEGFA-225ENST00000523950 TAF1DQ9H5J8 278 aaPredicted RBP15.62■□□□□ 0.09
VEGFA-225ENST00000523950 PSMD14O00487 310 aa15.61■□□□□ 0.09
VEGFA-225ENST00000523950 VIL1P09327 827 aaKnown RBP15.61■□□□□ 0.09
VEGFA-225ENST00000523950 EPHX2P34913 555 aa15.61■□□□□ 0.09
VEGFA-225ENST00000523950 C1QTNF8P60827 252 aa15.61■□□□□ 0.09
VEGFA-225ENST00000523950 ZNF804AQ7Z570 1209 aa15.61■□□□□ 0.09
VEGFA-225ENST00000523950 PNMA8AQ86V59 439 aaPredicted RBP15.61■□□□□ 0.09
VEGFA-225ENST00000523950 DPF2Q92785 391 aa15.61■□□□□ 0.09
VEGFA-225ENST00000523950 GPRC5DQ9NZD1 345 aa15.61■□□□□ 0.09
VEGFA-225ENST00000523950 ZNF646O15015 1829 aaPredicted RBP15.61■□□□□ 0.09
VEGFA-225ENST00000523950 ADAMTSL1Q8N6G6 1762 aa15.6■□□□□ 0.09
VEGFA-225ENST00000523950 USP17L3A6NCW0 530 aa15.6■□□□□ 0.09
VEGFA-225ENST00000523950 USP17L4A6NCW7 530 aa15.6■□□□□ 0.09
VEGFA-225ENST00000523950 WTIPA6NIX2 430 aaPredicted RBP15.6■□□□□ 0.09
VEGFA-225ENST00000523950 KLRK1P26718 216 aa15.6■□□□□ 0.09
VEGFA-225ENST00000523950 ATP8B2P98198 1209 aa15.6■□□□□ 0.09
VEGFA-225ENST00000523950 FSTL1Q12841 308 aa15.6■□□□□ 0.09
VEGFA-225ENST00000523950 PUM3Q15397 648 aaKnown RBP15.6■□□□□ 0.09
VEGFA-225ENST00000523950 USP17L1Q7RTZ2 530 aa15.6■□□□□ 0.09
VEGFA-225ENST00000523950 ATG9AQ7Z3C6 839 aa15.6■□□□□ 0.09
VEGFA-225ENST00000523950 TXNRD3Q86VQ6 643 aa15.6■□□□□ 0.09
VEGFA-225ENST00000523950 COG6Q9Y2V7 657 aa15.6■□□□□ 0.09
VEGFA-225ENST00000523950 MYO3BQ8WXR4 1341 aa15.6■□□□□ 0.09
VEGFA-225ENST00000523950 GMPSP49915 693 aaPredicted RBP15.59■□□□□ 0.09
VEGFA-225ENST00000523950 POLA2Q14181 598 aa15.59■□□□□ 0.09
VEGFA-225ENST00000523950 STRIP1Q5VSL9 837 aa15.59■□□□□ 0.09
VEGFA-225ENST00000523950 SMC1BQ8NDV3 1235 aa15.59■□□□□ 0.09
VEGFA-225ENST00000523950 AGBL3Q8NEM8 1001 aa15.59■□□□□ 0.09
VEGFA-225ENST00000523950 SSH3Q8TE77 659 aa15.59■□□□□ 0.09
VEGFA-225ENST00000523950 SIL1Q9H173 461 aa15.59■□□□□ 0.09
VEGFA-225ENST00000523950 CD209Q9NNX6 404 aa15.59■□□□□ 0.09
VEGFA-225ENST00000523950 ADARB2Q9NS39 739 aaKnown RBP15.59■□□□□ 0.09
VEGFA-225ENST00000523950 CEP126Q9P2H0 1117 aa15.59■□□□□ 0.09
VEGFA-225ENST00000523950 ARAP2Q8WZ64 1704 aa15.58■□□□□ 0.08
VEGFA-225ENST00000523950 PNMA6EA0A0J9YXQ4 647 aa15.58■□□□□ 0.08
VEGFA-225ENST00000523950 SNAP23O00161 211 aa15.58■□□□□ 0.08
VEGFA-225ENST00000523950 IFIT1P09914 478 aaKnown RBP15.58■□□□□ 0.08
VEGFA-225ENST00000523950 IL1R1P14778 569 aa15.58■□□□□ 0.08
VEGFA-225ENST00000523950 FGFR2P21802 821 aa15.58■□□□□ 0.08
VEGFA-225ENST00000523950 MMP14P50281 582 aa15.58■□□□□ 0.08
VEGFA-225ENST00000523950 RRP1P56182 461 aaKnown RBP15.58■□□□□ 0.08
VEGFA-225ENST00000523950 CAVIN4Q5BKX8 364 aa15.58■□□□□ 0.08
VEGFA-225ENST00000523950 RSBN1LQ6PCB5 846 aaPredicted RBP15.58■□□□□ 0.08
VEGFA-225ENST00000523950 USP50Q70EL3 339 aaPredicted RBP15.58■□□□□ 0.08
VEGFA-225ENST00000523950 LDHDQ86WU2 507 aa15.58■□□□□ 0.08
VEGFA-225ENST00000523950 LPIN2Q92539 896 aa15.58■□□□□ 0.08
VEGFA-225ENST00000523950 PA2G4Q9UQ80 394 aaKnown RBP15.58■□□□□ 0.08
VEGFA-225ENST00000523950 SLC5A1P13866 664 aa15.57■□□□□ 0.08
VEGFA-225ENST00000523950 HIBADHP31937 336 aaKnown RBP15.57■□□□□ 0.08
VEGFA-225ENST00000523950 CEP85Q6P2H3 762 aa15.57■□□□□ 0.08
VEGFA-225ENST00000523950 C1orf115Q9H7X2 142 aa15.57■□□□□ 0.08
VEGFA-225ENST00000523950 KCNQ5Q9NR82 932 aa15.57■□□□□ 0.08
VEGFA-225ENST00000523950 ZBTB40Q9NUA8 1239 aa15.57■□□□□ 0.08
VEGFA-225ENST00000523950 H7C1D1 291 aa15.56■□□□□ 0.08
VEGFA-225ENST00000523950 EPS15P42566 896 aa15.56■□□□□ 0.08
VEGFA-225ENST00000523950 FKBP1AP62942 108 aaKnown RBP15.56■□□□□ 0.08
VEGFA-225ENST00000523950 G3BP1Q13283 466 aaKnown RBP eCLIP15.56■□□□□ 0.08
VEGFA-225ENST00000523950 DACT2Q5SW24 774 aa15.56■□□□□ 0.08
VEGFA-225ENST00000523950 RPAP2Q8IXW5 612 aaPredicted RBP15.56■□□□□ 0.08
VEGFA-225ENST00000523950 FAM84BQ96KN1 310 aaPredicted RBP15.56■□□□□ 0.08
VEGFA-225ENST00000523950 CNOT7Q9UIV1 285 aaKnown RBP15.56■□□□□ 0.08
VEGFA-225ENST00000523950 AKAP2Q9Y2D5 859 aa15.56■□□□□ 0.08
VEGFA-225ENST00000523950 ZBTB12Q9Y330 459 aaPredicted RBP15.56■□□□□ 0.08
VEGFA-225ENST00000523950 MYH13Q9UKX3 1938 aa15.55■□□□□ 0.08
VEGFA-225ENST00000523950 ZBTB22O15209 634 aa15.55■□□□□ 0.08
VEGFA-225ENST00000523950 ATP2B3Q16720 1220 aa15.55■□□□□ 0.08
VEGFA-225ENST00000523950 EAPPQ56P03 285 aaPredicted RBP15.55■□□□□ 0.08
VEGFA-225ENST00000523950 C20orf194Q5TEA3 1177 aa15.55■□□□□ 0.08
VEGFA-225ENST00000523950 TTLL5Q6EMB2 1281 aa15.55■□□□□ 0.08
VEGFA-225ENST00000523950 CHADLQ6NUI6 762 aa15.55■□□□□ 0.08
VEGFA-225ENST00000523950 FBXO33Q7Z6M2 555 aa15.55■□□□□ 0.08
VEGFA-225ENST00000523950 VPS37DQ86XT2 251 aa15.55■□□□□ 0.08
VEGFA-225ENST00000523950 MICALL2Q8IY33 904 aa15.55■□□□□ 0.08
VEGFA-225ENST00000523950 TDRD7Q8NHU6 1098 aaKnown RBP15.55■□□□□ 0.08
VEGFA-225ENST00000523950 GMLQ99445 158 aa15.55■□□□□ 0.08
VEGFA-225ENST00000523950 NOP58Q9Y2X3 529 aaKnown RBP15.55■□□□□ 0.08
VEGFA-225ENST00000523950 FAM205AQ6ZU69 1335 aa15.54■□□□□ 0.08
VEGFA-225ENST00000523950 HMMRO75330 724 aa15.54■□□□□ 0.08
VEGFA-225ENST00000523950 SASH1O94885 1247 aa15.54■□□□□ 0.08
VEGFA-225ENST00000523950 GYG1P46976 350 aa15.54■□□□□ 0.08
VEGFA-225ENST00000523950 GTF2IP78347 998 aa15.54■□□□□ 0.08
VEGFA-225ENST00000523950 USP17L8P0C7I0 530 aa15.53■□□□□ 0.08
VEGFA-225ENST00000523950 ZNF280AP59817 542 aaPredicted RBP15.53■□□□□ 0.08
VEGFA-225ENST00000523950 ZC3H15Q8WU90 426 aaKnown RBP15.53■□□□□ 0.08
VEGFA-225ENST00000523950 FBXW7Q969H0 707 aa15.53■□□□□ 0.08
VEGFA-225ENST00000523950 SURF6O75683 361 aaKnown RBP15.52■□□□□ 0.08
VEGFA-225ENST00000523950 HSP90AB4PQ58FF6 505 aa15.52■□□□□ 0.08
VEGFA-225ENST00000523950 OGFOD1Q8N543 542 aa15.52■□□□□ 0.08
VEGFA-225ENST00000523950 GPR108Q9NPR9 543 aa15.52■□□□□ 0.08
VEGFA-225ENST00000523950 HDAC9Q9UKV0 1011 aa15.52■□□□□ 0.08
VEGFA-225ENST00000523950 CLEC11AQ9Y240 323 aa15.52■□□□□ 0.08
VEGFA-225ENST00000523950 SEMA3EO15041 775 aa15.51■□□□□ 0.07
VEGFA-225ENST00000523950 POTEIP0CG38 1075 aa15.51■□□□□ 0.07
VEGFA-225ENST00000523950 POTEJP0CG39 1038 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms