RNA–Protein interactions for RNA: ENST00000520947.1

PTPN12-214, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-214ENST00000520947 USP21Q9UK80 565 aa8.97□□□□□ -0.97
PTPN12-214ENST00000520947 GNEQ9Y223 722 aaKnown RBP8.97□□□□□ -0.97
PTPN12-214ENST00000520947 C9orf172C9J069 976 aa8.96□□□□□ -0.98
PTPN12-214ENST00000520947 LINC01387J3KSC0 135 aa8.96□□□□□ -0.98
PTPN12-214ENST00000520947 CDC27P30260 824 aa8.96□□□□□ -0.98
PTPN12-214ENST00000520947 ZFYVE28Q9HCC9 887 aa8.96□□□□□ -0.98
PTPN12-214ENST00000520947 SH2B1Q9NRF2 756 aaPredicted RBP8.96□□□□□ -0.98
PTPN12-214ENST00000520947 DZANK1Q9NVP4 752 aa8.96□□□□□ -0.98
PTPN12-214ENST00000520947 AMOTL2Q9Y2J4 779 aa8.96□□□□□ -0.98
PTPN12-214ENST00000520947 PPME1Q9Y570 386 aa8.96□□□□□ -0.98
PTPN12-214ENST00000520947 IVNS1ABPQ9Y6Y0 642 aa8.96□□□□□ -0.98
PTPN12-214ENST00000520947 OSMRQ99650 979 aa8.95□□□□□ -0.98
PTPN12-214ENST00000520947 LATS2Q9NRM7 1088 aa8.95□□□□□ -0.98
PTPN12-214ENST00000520947 NFKBIEO00221 500 aa8.94□□□□□ -0.98
PTPN12-214ENST00000520947 EDN3P14138 238 aa8.94□□□□□ -0.98
PTPN12-214ENST00000520947 PTPRAP18433 802 aa8.94□□□□□ -0.98
PTPN12-214ENST00000520947 DOC2BQ14184 412 aa8.94□□□□□ -0.98
PTPN12-214ENST00000520947 SETDB1Q15047 1291 aa8.94□□□□□ -0.98
PTPN12-214ENST00000520947 CACTIN-AS1Q8N1I8 211 aa8.94□□□□□ -0.98
PTPN12-214ENST00000520947 LENG1Q96BZ8 264 aaPredicted RBP8.94□□□□□ -0.98
PTPN12-214ENST00000520947 ZKSCAN3Q9BRR0 538 aa8.94□□□□□ -0.98
PTPN12-214ENST00000520947 FAM177BA6PVY3 158 aa8.93□□□□□ -0.98
PTPN12-214ENST00000520947 PDE2AO00408 941 aaPredicted RBP8.93□□□□□ -0.98
PTPN12-214ENST00000520947 EPHA1P21709 976 aa8.93□□□□□ -0.98
PTPN12-214ENST00000520947 PDE3BQ13370 1112 aa8.93□□□□□ -0.98
PTPN12-214ENST00000520947 ORC1Q13415 861 aa8.93□□□□□ -0.98
PTPN12-214ENST00000520947 MBTPS1Q14703 1052 aa8.93□□□□□ -0.98
PTPN12-214ENST00000520947 FAM129BQ96TA1 746 aa8.93□□□□□ -0.98
PTPN12-214ENST00000520947 TRAIPQ9BWF2 469 aa8.93□□□□□ -0.98
PTPN12-214ENST00000520947 MUC3BQ9H195 1237 aa8.93□□□□□ -0.98
PTPN12-214ENST00000520947 DLL1O00548 723 aa8.92□□□□□ -0.98
PTPN12-214ENST00000520947 FURINP09958 794 aa8.92□□□□□ -0.98
PTPN12-214ENST00000520947 NRG1Q02297 640 aaPredicted RBP8.92□□□□□ -0.98
PTPN12-214ENST00000520947 USPL1Q5W0Q7 1092 aa8.92□□□□□ -0.98
PTPN12-214ENST00000520947 CARD10Q9BWT7 1032 aa8.92□□□□□ -0.98
PTPN12-214ENST00000520947 NIF3L1Q9GZT8 377 aa8.92□□□□□ -0.98
PTPN12-214ENST00000520947 GPR182O15218 404 aa8.91□□□□□ -0.98
PTPN12-214ENST00000520947 PDIA4P13667 645 aaKnown RBP8.91□□□□□ -0.98
PTPN12-214ENST00000520947 KCNA1Q09470 495 aa8.91□□□□□ -0.98
PTPN12-214ENST00000520947 ADGRE1Q14246 886 aa8.91□□□□□ -0.98
PTPN12-214ENST00000520947 PEAR1Q5VY43 1037 aaPredicted RBP8.91□□□□□ -0.98
PTPN12-214ENST00000520947 IGF2-ASQ6U949 168 aa8.91□□□□□ -0.98
PTPN12-214ENST00000520947 GALNT11Q8NCW6 608 aa8.91□□□□□ -0.98
PTPN12-214ENST00000520947 K7ELQ4 463 aaPredicted RBP8.9□□□□□ -0.98
PTPN12-214ENST00000520947 FAM117BQ6P1L5 589 aa8.9□□□□□ -0.98
PTPN12-214ENST00000520947 TMEM102Q8N9M5 508 aaPredicted RBP8.9□□□□□ -0.98
PTPN12-214ENST00000520947 ASAP3Q8TDY4 903 aa8.9□□□□□ -0.98
PTPN12-214ENST00000520947 NXPE3Q969Y0 559 aa8.9□□□□□ -0.98
PTPN12-214ENST00000520947 CITED4Q96RK1 184 aa8.9□□□□□ -0.98
PTPN12-214ENST00000520947 ADAM19Q9H013 955 aa8.9□□□□□ -0.98
PTPN12-214ENST00000520947 NEFLP07196 543 aa8.89□□□□□ -0.99
PTPN12-214ENST00000520947 CABP4P57796 275 aa8.89□□□□□ -0.99
PTPN12-214ENST00000520947 TXNRD3Q86VQ6 643 aa8.89□□□□□ -0.99
PTPN12-214ENST00000520947 MAP4K3Q8IVH8 894 aa8.89□□□□□ -0.99
PTPN12-214ENST00000520947 RBCK1Q9BYM8 510 aa8.89□□□□□ -0.99
PTPN12-214ENST00000520947 SRA1Q9HD15 236 aaKnown RBP8.89□□□□□ -0.99
PTPN12-214ENST00000520947 TPSG1Q9NRR2 321 aa8.89□□□□□ -0.99
PTPN12-214ENST00000520947 METTL12A8MUP2 240 aa8.88□□□□□ -0.99
PTPN12-214ENST00000520947 FSCN2O14926 492 aa8.88□□□□□ -0.99
PTPN12-214ENST00000520947 IGHA2P01877 340 aa8.88□□□□□ -0.99
PTPN12-214ENST00000520947 MAPK1P28482 360 aa8.88□□□□□ -0.99
PTPN12-214ENST00000520947 IREB2P48200 963 aaKnown RBP8.88□□□□□ -0.99
PTPN12-214ENST00000520947 GALNT12Q8IXK2 581 aa8.88□□□□□ -0.99
PTPN12-214ENST00000520947 DCTN4Q9UJW0 460 aa8.88□□□□□ -0.99
PTPN12-214ENST00000520947 H3BRJ5 948 aa8.87□□□□□ -0.99
PTPN12-214ENST00000520947 CPNE3O75131 537 aaKnown RBP8.87□□□□□ -0.99
PTPN12-214ENST00000520947 ALX3O95076 343 aa8.87□□□□□ -0.99
PTPN12-214ENST00000520947 TMC7Q7Z402 723 aa8.87□□□□□ -0.99
PTPN12-214ENST00000520947 WFDC12Q8WWY7 111 aa8.87□□□□□ -0.99
PTPN12-214ENST00000520947 SLC7A3Q8WY07 619 aa8.87□□□□□ -0.99
PTPN12-214ENST00000520947 SOX13Q9UN79 622 aa8.87□□□□□ -0.99
PTPN12-214ENST00000520947 A0A1W2PP55 124 aa8.86□□□□□ -0.99
PTPN12-214ENST00000520947 EIF1AYO14602 144 aaKnown RBP8.86□□□□□ -0.99
PTPN12-214ENST00000520947 DDX3YO15523 660 aaKnown RBP8.86□□□□□ -0.99
PTPN12-214ENST00000520947 NOS3P29474 1203 aa8.86□□□□□ -0.99
PTPN12-214ENST00000520947 CD68P34810 354 aaPredicted RBP8.86□□□□□ -0.99
PTPN12-214ENST00000520947 FOXD4L6Q3SYB3 417 aaPredicted RBP8.86□□□□□ -0.99
PTPN12-214ENST00000520947 FOXD4L3Q6VB84 417 aaPredicted RBP8.86□□□□□ -0.99
PTPN12-214ENST00000520947 AEBP1Q8IUX7 1158 aa8.86□□□□□ -0.99
PTPN12-214ENST00000520947 AGGF1Q8N302 714 aaeCLIP8.86□□□□□ -0.99
PTPN12-214ENST00000520947 BSNDQ8WZ55 320 aa8.86□□□□□ -0.99
PTPN12-214ENST00000520947 DMRTB1Q96MA1 342 aa8.86□□□□□ -0.99
PTPN12-214ENST00000520947 MRPL18Q9H0U6 180 aaKnown RBP8.86□□□□□ -0.99
PTPN12-214ENST00000520947 NPHS2Q9NP85 383 aa8.86□□□□□ -0.99
PTPN12-214ENST00000520947 SEC31BQ9NQW1 1179 aa8.86□□□□□ -0.99
PTPN12-214ENST00000520947 KCNK4Q9NYG8 393 aa8.86□□□□□ -0.99
PTPN12-214ENST00000520947 HGSNATQ68CP4 663 aa8.85□□□□□ -0.99
PTPN12-214ENST00000520947 DCAF11Q8TEB1 546 aa8.85□□□□□ -0.99
PTPN12-214ENST00000520947 KLHDC7BQ96G42 594 aa8.85□□□□□ -0.99
PTPN12-214ENST00000520947 BHLHE41Q9C0J9 482 aaPredicted RBP8.85□□□□□ -0.99
PTPN12-214ENST00000520947 WISP1O95388 367 aa8.84□□□□□ -0.99
PTPN12-214ENST00000520947 VN1R5Q7Z5H4 357 aa8.84□□□□□ -0.99
PTPN12-214ENST00000520947 KLHL23Q8NBE8 558 aa8.84□□□□□ -0.99
PTPN12-214ENST00000520947 AKTIPQ9H8T0 292 aa8.84□□□□□ -0.99
PTPN12-214ENST00000520947 LIN7BQ9HAP6 207 aa8.84□□□□□ -0.99
PTPN12-214ENST00000520947 F8W735 103 aaPredicted RBP8.83□□□□□ -1
PTPN12-214ENST00000520947 TM4SF5O14894 197 aa8.83□□□□□ -1
PTPN12-214ENST00000520947 PIP4K2BP78356 416 aa8.83□□□□□ -1
PTPN12-214ENST00000520947 IKBKEQ14164 716 aa8.83□□□□□ -1
PTPN12-214ENST00000520947 XP32Q5T750 250 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms