RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 C1orf115Q9H7X2 142 aa27.38■■□□□ 1.97
VEGFA-217ENST00000518538 KCNQ5Q9NR82 932 aa27.38■■□□□ 1.97
VEGFA-217ENST00000518538 HACL1Q9UJ83 578 aa27.38■■□□□ 1.97
VEGFA-217ENST00000518538 PA2G4Q9UQ80 394 aaKnown RBP27.38■■□□□ 1.97
VEGFA-217ENST00000518538 PSMD14O00487 310 aa27.37■■□□□ 1.97
VEGFA-217ENST00000518538 PDE8BO95263 885 aa27.37■■□□□ 1.97
VEGFA-217ENST00000518538 SCNN1DP51172 638 aa27.37■■□□□ 1.97
VEGFA-217ENST00000518538 C20orf194Q5TEA3 1177 aa27.37■■□□□ 1.97
VEGFA-217ENST00000518538 PNMA6EA0A0J9YXQ4 647 aa27.36■■□□□ 1.97
VEGFA-217ENST00000518538 TOMM70O94826 608 aa27.36■■□□□ 1.97
VEGFA-217ENST00000518538 LMOD1P29536 600 aaPredicted RBP27.36■■□□□ 1.97
VEGFA-217ENST00000518538 SCN9AQ15858 1988 aa27.35■■□□□ 1.97
VEGFA-217ENST00000518538 CHMP4BQ9H444 224 aaKnown RBP27.35■■□□□ 1.97
VEGFA-217ENST00000518538 TAF1DQ9H5J8 278 aaPredicted RBP27.35■■□□□ 1.97
VEGFA-217ENST00000518538 IL15P40933 162 aaPredicted RBP27.34■■□□□ 1.97
VEGFA-217ENST00000518538 GMPSP49915 693 aaPredicted RBP27.34■■□□□ 1.97
VEGFA-217ENST00000518538 ATP8B2P98198 1209 aa27.34■■□□□ 1.97
VEGFA-217ENST00000518538 ZNF804AQ7Z570 1209 aa27.34■■□□□ 1.97
VEGFA-217ENST00000518538 VIL1P09327 827 aaKnown RBP27.33■■□□□ 1.97
VEGFA-217ENST00000518538 EPHX2P34913 555 aa27.33■■□□□ 1.97
VEGFA-217ENST00000518538 RRP1P56182 461 aaKnown RBP27.33■■□□□ 1.97
VEGFA-217ENST00000518538 POLA2Q14181 598 aa27.33■■□□□ 1.97
VEGFA-217ENST00000518538 RBM46Q8TBY0 533 aaKnown RBP27.33■■□□□ 1.97
VEGFA-217ENST00000518538 CD209Q9NNX6 404 aa27.33■■□□□ 1.97
VEGFA-217ENST00000518538 GPRC5DQ9NZD1 345 aa27.33■■□□□ 1.97
VEGFA-217ENST00000518538 USP17L3A6NCW0 530 aa27.32■■□□□ 1.96
VEGFA-217ENST00000518538 USP17L4A6NCW7 530 aa27.32■■□□□ 1.96
VEGFA-217ENST00000518538 RPS12P25398 132 aaKnown RBP27.32■■□□□ 1.96
VEGFA-217ENST00000518538 C1QTNF8P60827 252 aa27.32■■□□□ 1.96
VEGFA-217ENST00000518538 PUM3Q15397 648 aaKnown RBP27.32■■□□□ 1.96
VEGFA-217ENST00000518538 USP17L1Q7RTZ2 530 aa27.32■■□□□ 1.96
VEGFA-217ENST00000518538 SSH3Q8TE77 659 aa27.32■■□□□ 1.96
VEGFA-217ENST00000518538 ZBTB40Q9NUA8 1239 aa27.32■■□□□ 1.96
VEGFA-217ENST00000518538 PSME4Q14997 1843 aa27.32■■□□□ 1.96
VEGFA-217ENST00000518538 EPS15P42566 896 aa27.31■■□□□ 1.96
VEGFA-217ENST00000518538 DPF2Q92785 391 aa27.31■■□□□ 1.96
VEGFA-217ENST00000518538 CEP126Q9P2H0 1117 aa27.31■■□□□ 1.96
VEGFA-217ENST00000518538 ZBTB12Q9Y330 459 aaPredicted RBP27.31■■□□□ 1.96
VEGFA-217ENST00000518538 ZNF609O15014 1411 aa27.31■■□□□ 1.96
VEGFA-217ENST00000518538 FGFR2P21802 821 aa27.3■■□□□ 1.96
VEGFA-217ENST00000518538 CEP85Q6P2H3 762 aa27.3■■□□□ 1.96
VEGFA-217ENST00000518538 IL1R1P14778 569 aa27.29■■□□□ 1.96
VEGFA-217ENST00000518538 RSBN1LQ6PCB5 846 aaPredicted RBP27.29■■□□□ 1.96
VEGFA-217ENST00000518538 PNMA8AQ86V59 439 aaPredicted RBP27.29■■□□□ 1.96
VEGFA-217ENST00000518538 IFIT1P09914 478 aaKnown RBP27.28■■□□□ 1.96
VEGFA-217ENST00000518538 HIBADHP31937 336 aaKnown RBP27.28■■□□□ 1.96
VEGFA-217ENST00000518538 GYG1P46976 350 aa27.28■■□□□ 1.96
VEGFA-217ENST00000518538 STRIP1Q5VSL9 837 aa27.28■■□□□ 1.96
VEGFA-217ENST00000518538 LPIN2Q92539 896 aa27.28■■□□□ 1.96
VEGFA-217ENST00000518538 FAM84BQ96KN1 310 aaPredicted RBP27.28■■□□□ 1.96
VEGFA-217ENST00000518538 SLC5A1P13866 664 aa27.27■■□□□ 1.96
VEGFA-217ENST00000518538 SMC1BQ8NDV3 1235 aa27.27■■□□□ 1.96
VEGFA-217ENST00000518538 AGBL3Q8NEM8 1001 aa27.27■■□□□ 1.96
VEGFA-217ENST00000518538 ADARB2Q9NS39 739 aaKnown RBP27.27■■□□□ 1.96
VEGFA-217ENST00000518538 CNOT7Q9UIV1 285 aaKnown RBP27.27■■□□□ 1.96
VEGFA-217ENST00000518538 FSTL1Q12841 308 aa27.26■■□□□ 1.95
VEGFA-217ENST00000518538 G3BP1Q13283 466 aaKnown RBP eCLIP27.26■■□□□ 1.95
VEGFA-217ENST00000518538 EAPPQ56P03 285 aaPredicted RBP27.26■■□□□ 1.95
VEGFA-217ENST00000518538 CAVIN4Q5BKX8 364 aa27.26■■□□□ 1.95
VEGFA-217ENST00000518538 DACT2Q5SW24 774 aa27.26■■□□□ 1.95
VEGFA-217ENST00000518538 TTLL5Q6EMB2 1281 aa27.26■■□□□ 1.95
VEGFA-217ENST00000518538 FBXO33Q7Z6M2 555 aa27.26■■□□□ 1.95
VEGFA-217ENST00000518538 LDHDQ86WU2 507 aa27.26■■□□□ 1.95
VEGFA-217ENST00000518538 MICALL2Q8IY33 904 aa27.26■■□□□ 1.95
VEGFA-217ENST00000518538 FBXW7Q969H0 707 aa27.26■■□□□ 1.95
VEGFA-217ENST00000518538 ZNF646O15015 1829 aaPredicted RBP27.25■■□□□ 1.95
VEGFA-217ENST00000518538 POTEIP0CG38 1075 aa27.25■■□□□ 1.95
VEGFA-217ENST00000518538 POTEJP0CG39 1038 aa27.25■■□□□ 1.95
VEGFA-217ENST00000518538 GTF2IP78347 998 aa27.25■■□□□ 1.95
VEGFA-217ENST00000518538 ATP2B3Q16720 1220 aa27.25■■□□□ 1.95
VEGFA-217ENST00000518538 USP50Q70EL3 339 aaPredicted RBP27.25■■□□□ 1.95
VEGFA-217ENST00000518538 TDRD7Q8NHU6 1098 aaKnown RBP27.25■■□□□ 1.95
VEGFA-217ENST00000518538 MYO3BQ8WXR4 1341 aa27.24■■□□□ 1.95
VEGFA-217ENST00000518538 H7C1D1 291 aa27.24■■□□□ 1.95
VEGFA-217ENST00000518538 VPS37DQ86XT2 251 aa27.24■■□□□ 1.95
VEGFA-217ENST00000518538 RPAP2Q8IXW5 612 aaPredicted RBP27.24■■□□□ 1.95
VEGFA-217ENST00000518538 GMLQ99445 158 aa27.24■■□□□ 1.95
VEGFA-217ENST00000518538 ADAMTSL1Q8N6G6 1762 aa27.24■■□□□ 1.95
VEGFA-217ENST00000518538 SHTN1A0MZ66 631 aa27.23■■□□□ 1.95
VEGFA-217ENST00000518538 TFCP2Q12800 502 aa27.23■■□□□ 1.95
VEGFA-217ENST00000518538 NOP58Q9Y2X3 529 aaKnown RBP27.23■■□□□ 1.95
VEGFA-217ENST00000518538 SURF6O75683 361 aaKnown RBP27.22■■□□□ 1.95
VEGFA-217ENST00000518538 SASH1O94885 1247 aa27.22■■□□□ 1.95
VEGFA-217ENST00000518538 CHADLQ6NUI6 762 aa27.22■■□□□ 1.95
VEGFA-217ENST00000518538 AKAP2Q9Y2D5 859 aa27.22■■□□□ 1.95
VEGFA-217ENST00000518538 BCAMP50895 628 aa27.21■■□□□ 1.95
VEGFA-217ENST00000518538 MXD3Q9BW11 206 aa27.21■■□□□ 1.95
VEGFA-217ENST00000518538 ZNF280AP59817 542 aaPredicted RBP27.2■■□□□ 1.94
VEGFA-217ENST00000518538 OS9Q13438 667 aaPredicted RBP27.2■■□□□ 1.94
VEGFA-217ENST00000518538 CLEC11AQ9Y240 323 aa27.2■■□□□ 1.94
VEGFA-217ENST00000518538 FAM205AQ6ZU69 1335 aa27.19■■□□□ 1.94
VEGFA-217ENST00000518538 HMMRO75330 724 aa27.19■■□□□ 1.94
VEGFA-217ENST00000518538 USP17L8P0C7I0 530 aa27.19■■□□□ 1.94
VEGFA-217ENST00000518538 FKBP1AP62942 108 aaKnown RBP27.19■■□□□ 1.94
VEGFA-217ENST00000518538 TRPM4Q8TD43 1214 aa27.19■■□□□ 1.94
VEGFA-217ENST00000518538 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.19■■□□□ 1.94
VEGFA-217ENST00000518538 SAMD7Q7Z3H4 446 aa27.18■■□□□ 1.94
VEGFA-217ENST00000518538 SIRT2Q8IXJ6 389 aa27.18■■□□□ 1.94
VEGFA-217ENST00000518538 ARAP2Q8WZ64 1704 aa27.18■■□□□ 1.94
VEGFA-217ENST00000518538 A0A1B0GUL7 405 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms