RNA–Protein interactions for RNA: ENST00000516222.1

RNU6-561P-201, Transcript of RNA, U6 small nuclear 561, pseudogene, humanhuman

BASIC

Gene RNU6-561P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-561P-201ENST00000516222 USP17L18D6R9N7 530 aa3.76□□□□□ -1.81
RNU6-561P-201ENST00000516222 USP17L22D6RA61 530 aa3.76□□□□□ -1.81
RNU6-561P-201ENST00000516222 USP17L17D6RBQ6 530 aa3.76□□□□□ -1.81
RNU6-561P-201ENST00000516222 USP17L19D6RCP7 530 aa3.76□□□□□ -1.81
RNU6-561P-201ENST00000516222 USP17L20D6RJB6 530 aa3.76□□□□□ -1.81
RNU6-561P-201ENST00000516222 EIF4EBP3O60516 100 aaPredicted RBP3.76□□□□□ -1.81
RNU6-561P-201ENST00000516222 ADAMTS4O75173 837 aa3.76□□□□□ -1.81
RNU6-561P-201ENST00000516222 WISP1O95388 367 aa3.76□□□□□ -1.81
RNU6-561P-201ENST00000516222 PIP4K2BP78356 416 aa3.76□□□□□ -1.81
RNU6-561P-201ENST00000516222 USP17L24Q0WX57 530 aa3.76□□□□□ -1.81
RNU6-561P-201ENST00000516222 CRTC2Q53ET0 693 aaPredicted RBP3.76□□□□□ -1.81
RNU6-561P-201ENST00000516222 NUTM2GQ5VZR2 741 aa3.76□□□□□ -1.81
RNU6-561P-201ENST00000516222 OGFOD2Q6N063 350 aa3.76□□□□□ -1.81
RNU6-561P-201ENST00000516222 PAOXQ6QHF9 649 aa3.76□□□□□ -1.81
RNU6-561P-201ENST00000516222 ABI1Q8IZP0 508 aa3.76□□□□□ -1.81
RNU6-561P-201ENST00000516222 FBXL6Q8N531 539 aa3.76□□□□□ -1.81
RNU6-561P-201ENST00000516222 POU5F2Q8N7G0 328 aa3.76□□□□□ -1.81
RNU6-561P-201ENST00000516222 C12orf50Q8NA57 414 aaPredicted RBP3.76□□□□□ -1.81
RNU6-561P-201ENST00000516222 TTC16Q8NEE8 873 aa3.76□□□□□ -1.81
RNU6-561P-201ENST00000516222 GLMNQ92990 594 aa3.76□□□□□ -1.81
RNU6-561P-201ENST00000516222 CALR3Q96L12 384 aaKnown RBP3.76□□□□□ -1.81
RNU6-561P-201ENST00000516222 MFSD14AQ96MC6 490 aa3.76□□□□□ -1.81
RNU6-561P-201ENST00000516222 RUSC1Q9BVN2 902 aa3.76□□□□□ -1.81
RNU6-561P-201ENST00000516222 YIPF2Q9BWQ6 316 aa3.76□□□□□ -1.81
RNU6-561P-201ENST00000516222 CARD10Q9BWT7 1032 aa3.76□□□□□ -1.81
RNU6-561P-201ENST00000516222 PBX4Q9BYU1 374 aa3.76□□□□□ -1.81
RNU6-561P-201ENST00000516222 A6NJR5 290 aa3.75□□□□□ -1.81
RNU6-561P-201ENST00000516222 BIN1O00499 593 aa3.75□□□□□ -1.81
RNU6-561P-201ENST00000516222 C8AP07357 584 aa3.75□□□□□ -1.81
RNU6-561P-201ENST00000516222 FOSL1P15407 271 aa3.75□□□□□ -1.81
RNU6-561P-201ENST00000516222 RFX1P22670 979 aa3.75□□□□□ -1.81
RNU6-561P-201ENST00000516222 MAP4P27816 1152 aaKnown RBP3.75□□□□□ -1.81
RNU6-561P-201ENST00000516222 USP11P51784 963 aa3.75□□□□□ -1.81
RNU6-561P-201ENST00000516222 JAG1P78504 1218 aa3.75□□□□□ -1.81
RNU6-561P-201ENST00000516222 PKN1Q16512 942 aa3.75□□□□□ -1.81
RNU6-561P-201ENST00000516222 VSIG10LQ86VR7 867 aa3.75□□□□□ -1.81
RNU6-561P-201ENST00000516222 KLHDC7BQ96G42 594 aa3.75□□□□□ -1.81
RNU6-561P-201ENST00000516222 PPP1R12CQ9BZL4 782 aa3.75□□□□□ -1.81
RNU6-561P-201ENST00000516222 CYP4F12Q9HCS2 524 aa3.75□□□□□ -1.81
RNU6-561P-201ENST00000516222 BSDC1Q9NW68 430 aaPredicted RBP3.75□□□□□ -1.81
RNU6-561P-201ENST00000516222 KCNK4Q9NYG8 393 aa3.75□□□□□ -1.81
RNU6-561P-201ENST00000516222 LRFN2Q9ULH4 789 aa3.75□□□□□ -1.81
RNU6-561P-201ENST00000516222 FAM95CA0A1B0GW59 222 aa3.74□□□□□ -1.81
RNU6-561P-201ENST00000516222 MEGF11A6BM72 1044 aa3.74□□□□□ -1.81
RNU6-561P-201ENST00000516222 H3BRJ5 948 aa3.74□□□□□ -1.81
RNU6-561P-201ENST00000516222 CYP26A1O43174 497 aa3.74□□□□□ -1.81
RNU6-561P-201ENST00000516222 RPLP1P05386 114 aaKnown RBP3.74□□□□□ -1.81
RNU6-561P-201ENST00000516222 LMOD1P29536 600 aaPredicted RBP3.74□□□□□ -1.81
RNU6-561P-201ENST00000516222 ATP11AP98196 1134 aa3.74□□□□□ -1.81
RNU6-561P-201ENST00000516222 NFKBIBQ15653 356 aa3.74□□□□□ -1.81
RNU6-561P-201ENST00000516222 TPRNQ4KMQ1 711 aa3.74□□□□□ -1.81
RNU6-561P-201ENST00000516222 COX20Q5RI15 118 aa3.74□□□□□ -1.81
RNU6-561P-201ENST00000516222 KANK4Q5T7N3 995 aaPredicted RBP3.74□□□□□ -1.81
RNU6-561P-201ENST00000516222 DUSP27Q5VZP5 1158 aa3.74□□□□□ -1.81
RNU6-561P-201ENST00000516222 C16orf46Q6P387 395 aa3.74□□□□□ -1.81
RNU6-561P-201ENST00000516222 RASSF4Q9H2L5 321 aa3.74□□□□□ -1.81
RNU6-561P-201ENST00000516222 SH2B1Q9NRF2 756 aaPredicted RBP3.74□□□□□ -1.81
RNU6-561P-201ENST00000516222 ABI2Q9NYB9 513 aaPredicted RBP3.74□□□□□ -1.81
RNU6-561P-201ENST00000516222 CCDC39Q9UFE4 941 aa3.74□□□□□ -1.81
RNU6-561P-201ENST00000516222 DDX3YO15523 660 aaKnown RBP3.73□□□□□ -1.81
RNU6-561P-201ENST00000516222 PCSK2P16519 638 aa3.73□□□□□ -1.81
RNU6-561P-201ENST00000516222 PREPP48147 710 aa3.73□□□□□ -1.81
RNU6-561P-201ENST00000516222 NLRP12P59046 1061 aa3.73□□□□□ -1.81
RNU6-561P-201ENST00000516222 CYP27A1Q02318 531 aa3.73□□□□□ -1.81
RNU6-561P-201ENST00000516222 C19orf57Q0VDD7 668 aa3.73□□□□□ -1.81
RNU6-561P-201ENST00000516222 UBASH3BQ8TF42 649 aa3.73□□□□□ -1.81
RNU6-561P-201ENST00000516222 SLC7A3Q8WY07 619 aa3.73□□□□□ -1.81
RNU6-561P-201ENST00000516222 PMEPA1Q969W9 287 aa3.73□□□□□ -1.81
RNU6-561P-201ENST00000516222 ADAM19Q9H013 955 aa3.73□□□□□ -1.81
RNU6-561P-201ENST00000516222 KIF4AO95239 1232 aa3.72□□□□□ -1.81
RNU6-561P-201ENST00000516222 PRNPP04156 253 aa3.72□□□□□ -1.81
RNU6-561P-201ENST00000516222 EPHA1P21709 976 aa3.72□□□□□ -1.81
RNU6-561P-201ENST00000516222 HOXA10P31260 410 aaPredicted RBP3.72□□□□□ -1.81
RNU6-561P-201ENST00000516222 PDE12Q6L8Q7 609 aaKnown RBP3.72□□□□□ -1.81
RNU6-561P-201ENST00000516222 ETFBKMTQ8IXQ9 262 aa3.72□□□□□ -1.81
RNU6-561P-201ENST00000516222 FLCNQ8NFG4 579 aa3.72□□□□□ -1.81
RNU6-561P-201ENST00000516222 FOXD4L4Q8WXT5 416 aaPredicted RBP3.72□□□□□ -1.81
RNU6-561P-201ENST00000516222 POP1Q99575 1024 aaKnown RBP3.72□□□□□ -1.81
RNU6-561P-201ENST00000516222 F13BP05160 661 aa3.71□□□□□ -1.82
RNU6-561P-201ENST00000516222 ZAP70P43403 619 aa3.71□□□□□ -1.82
RNU6-561P-201ENST00000516222 SWI5Q1ZZU3 235 aa3.71□□□□□ -1.82
RNU6-561P-201ENST00000516222 COL13A1Q5TAT6 717 aaPredicted RBP3.71□□□□□ -1.82
RNU6-561P-201ENST00000516222 PROSER2Q86WR7 435 aaPredicted RBP3.71□□□□□ -1.82
RNU6-561P-201ENST00000516222 CEP120Q8N960 986 aa3.71□□□□□ -1.82
RNU6-561P-201ENST00000516222 ABTB2Q8N961 1025 aa3.71□□□□□ -1.82
RNU6-561P-201ENST00000516222 COL26A1Q96A83 441 aa3.71□□□□□ -1.82
RNU6-561P-201ENST00000516222 TBC1D32Q96NH3 1257 aa3.71□□□□□ -1.82
RNU6-561P-201ENST00000516222 SLC38A3Q99624 504 aa3.71□□□□□ -1.82
RNU6-561P-201ENST00000516222 ZFYVE1Q9HBF4 777 aa3.71□□□□□ -1.82
RNU6-561P-201ENST00000516222 DBX1A6NMT0 343 aa3.7□□□□□ -1.82
RNU6-561P-201ENST00000516222 PDE2AO00408 941 aaPredicted RBP3.7□□□□□ -1.82
RNU6-561P-201ENST00000516222 ADAM11O75078 769 aa3.7□□□□□ -1.82
RNU6-561P-201ENST00000516222 FARP2O94887 1054 aaPredicted RBP3.7□□□□□ -1.82
RNU6-561P-201ENST00000516222 ITGB5P18084 799 aa3.7□□□□□ -1.82
RNU6-561P-201ENST00000516222 CES1P23141 567 aa3.7□□□□□ -1.82
RNU6-561P-201ENST00000516222 FKBP5Q13451 457 aaPredicted RBP3.7□□□□□ -1.82
RNU6-561P-201ENST00000516222 IKBKEQ14164 716 aa3.7□□□□□ -1.82
RNU6-561P-201ENST00000516222 MAP7Q14244 749 aa3.7□□□□□ -1.82
RNU6-561P-201ENST00000516222 TRIP4Q15650 581 aaPredicted RBP3.7□□□□□ -1.82
RNU6-561P-201ENST00000516222 MSMPQ1L6U9 139 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms