RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 GMPSP49915 693 aaPredicted RBP24.31■■□□□ 1.48
SMAD1-211ENST00000512019 TMC4Q7Z404 712 aa24.31■■□□□ 1.48
SMAD1-211ENST00000512019 ADARB2Q9NS39 739 aaKnown RBP24.31■■□□□ 1.48
SMAD1-211ENST00000512019 WBP1LQ9NX94 342 aa24.31■■□□□ 1.48
SMAD1-211ENST00000512019 WDR33Q9C0J8 1336 aaKnown RBP24.31■■□□□ 1.48
SMAD1-211ENST00000512019 PNMA6EA0A0J9YXQ4 647 aa24.3■■□□□ 1.48
SMAD1-211ENST00000512019 RAD17O75943 681 aa24.3■■□□□ 1.48
SMAD1-211ENST00000512019 RPS8P62241 208 aaKnown RBP24.3■■□□□ 1.48
SMAD1-211ENST00000512019 CIAPIN1Q6FI81 312 aa24.3■■□□□ 1.48
SMAD1-211ENST00000512019 SSH3Q8TE77 659 aa24.3■■□□□ 1.48
SMAD1-211ENST00000512019 CELF1Q92879 486 aaKnown RBP24.3■■□□□ 1.48
SMAD1-211ENST00000512019 YDJCA8MPS7 323 aa24.29■■□□□ 1.48
SMAD1-211ENST00000512019 POLA2Q14181 598 aa24.29■■□□□ 1.48
SMAD1-211ENST00000512019 CST9Q5W186 159 aa24.29■■□□□ 1.48
SMAD1-211ENST00000512019 AIDAQ96BJ3 306 aa24.29■■□□□ 1.48
SMAD1-211ENST00000512019 MPHOSPH8Q99549 860 aa24.29■■□□□ 1.48
SMAD1-211ENST00000512019 SHTN1A0MZ66 631 aa24.28■■□□□ 1.48
SMAD1-211ENST00000512019 RFX5P48382 616 aaPredicted RBP24.28■■□□□ 1.48
SMAD1-211ENST00000512019 CTCFP49711 727 aaPredicted RBP24.28■■□□□ 1.48
SMAD1-211ENST00000512019 SPEF2Q9C093 1822 aa24.27■■□□□ 1.48
SMAD1-211ENST00000512019 PRDM10Q9NQV6 1147 aa24.27■■□□□ 1.48
SMAD1-211ENST00000512019 BSDC1Q9NW68 430 aaPredicted RBP24.27■■□□□ 1.48
SMAD1-211ENST00000512019 PCDHB15Q9Y5E8 787 aa24.27■■□□□ 1.48
SMAD1-211ENST00000512019 LBX1P52954 281 aa24.26■■□□□ 1.47
SMAD1-211ENST00000512019 PTPN12Q05209 780 aaKnown RBP24.26■■□□□ 1.47
SMAD1-211ENST00000512019 ZNF594Q96JF6 807 aaPredicted RBP24.26■■□□□ 1.47
SMAD1-211ENST00000512019 COPRSQ9NQ92 184 aa24.26■■□□□ 1.47
SMAD1-211ENST00000512019 POLR2AP24928 1970 aaKnown RBP24.25■■□□□ 1.47
SMAD1-211ENST00000512019 HIRAP54198 1017 aaPredicted RBP24.25■■□□□ 1.47
SMAD1-211ENST00000512019 CYP4F22Q6NT55 531 aa24.25■■□□□ 1.47
SMAD1-211ENST00000512019 LDHAL6AQ6ZMR3 332 aa24.25■■□□□ 1.47
SMAD1-211ENST00000512019 SIRT2Q8IXJ6 389 aa24.25■■□□□ 1.47
SMAD1-211ENST00000512019 TRPM4Q8TD43 1214 aa24.25■■□□□ 1.47
SMAD1-211ENST00000512019 GLIS2Q9BZE0 524 aaPredicted RBP24.25■■□□□ 1.47
SMAD1-211ENST00000512019 CNNM1Q9NRU3 951 aa24.25■■□□□ 1.47
SMAD1-211ENST00000512019 FBXO3Q9UK99 471 aa24.25■■□□□ 1.47
SMAD1-211ENST00000512019 GRM1Q13255 1194 aa24.24■■□□□ 1.47
SMAD1-211ENST00000512019 PAXIP1Q6ZW49 1069 aaPredicted RBP24.24■■□□□ 1.47
SMAD1-211ENST00000512019 KLHDC4Q8TBB5 520 aa24.24■■□□□ 1.47
SMAD1-211ENST00000512019 CAPNS2Q96L46 248 aa24.24■■□□□ 1.47
SMAD1-211ENST00000512019 NSFL1CQ9UNZ2 370 aaKnown RBP24.24■■□□□ 1.47
SMAD1-211ENST00000512019 SCN9AQ15858 1988 aa24.23■■□□□ 1.47
SMAD1-211ENST00000512019 RIMBP2O15034 1052 aa24.23■■□□□ 1.47
SMAD1-211ENST00000512019 CIAO1O76071 339 aa24.23■■□□□ 1.47
SMAD1-211ENST00000512019 HSPA8P11142 646 aaKnown RBP24.23■■□□□ 1.47
SMAD1-211ENST00000512019 GPSM2P81274 684 aa24.23■■□□□ 1.47
SMAD1-211ENST00000512019 TNIP1Q15025 636 aa24.23■■□□□ 1.47
SMAD1-211ENST00000512019 ERICH6BQ5W0A0 696 aa24.23■■□□□ 1.47
SMAD1-211ENST00000512019 PA2G4Q9UQ80 394 aaKnown RBP24.23■■□□□ 1.47
SMAD1-211ENST00000512019 TLL2Q9Y6L7 1015 aa24.23■■□□□ 1.47
SMAD1-211ENST00000512019 EYA2O00167 538 aa24.22■■□□□ 1.47
SMAD1-211ENST00000512019 GPR101Q96P66 508 aaPredicted RBP24.22■■□□□ 1.47
SMAD1-211ENST00000512019 SIL1Q9H173 461 aa24.22■■□□□ 1.47
SMAD1-211ENST00000512019 DBNDD1Q9H9R9 158 aa24.22■■□□□ 1.47
SMAD1-211ENST00000512019 POLLQ9UGP5 575 aa24.22■■□□□ 1.47
SMAD1-211ENST00000512019 PGAP2Q9UHJ9 254 aa24.22■■□□□ 1.47
SMAD1-211ENST00000512019 CNOT7Q9UIV1 285 aaKnown RBP24.22■■□□□ 1.47
SMAD1-211ENST00000512019 ZBTB12Q9Y330 459 aaPredicted RBP24.22■■□□□ 1.47
SMAD1-211ENST00000512019 HDAC1Q13547 482 aaPredicted RBP24.21■■□□□ 1.47
SMAD1-211ENST00000512019 WASHC4Q2M389 1173 aa24.21■■□□□ 1.47
SMAD1-211ENST00000512019 HSP90AB4PQ58FF6 505 aa24.21■■□□□ 1.47
SMAD1-211ENST00000512019 MROH5Q6ZUA9 1318 aa24.2■■□□□ 1.46
SMAD1-211ENST00000512019 C6orf229H3BNL8 230 aa24.2■■□□□ 1.46
SMAD1-211ENST00000512019 SURF6O75683 361 aaKnown RBP24.2■■□□□ 1.46
SMAD1-211ENST00000512019 CELF2O95319 508 aaKnown RBP24.2■■□□□ 1.46
SMAD1-211ENST00000512019 MAP2K1Q02750 393 aaPredicted RBP24.2■■□□□ 1.46
SMAD1-211ENST00000512019 G3BP1Q13283 466 aaKnown RBP eCLIP24.2■■□□□ 1.46
SMAD1-211ENST00000512019 NOP58Q9Y2X3 529 aaKnown RBP24.2■■□□□ 1.46
SMAD1-211ENST00000512019 PSMD14O00487 310 aa24.19■■□□□ 1.46
SMAD1-211ENST00000512019 IL15P40933 162 aaPredicted RBP24.19■■□□□ 1.46
SMAD1-211ENST00000512019 OS9Q13438 667 aaPredicted RBP24.19■■□□□ 1.46
SMAD1-211ENST00000512019 LRRC24Q50LG9 513 aa24.19■■□□□ 1.46
SMAD1-211ENST00000512019 MICALL2Q8IY33 904 aa24.19■■□□□ 1.46
SMAD1-211ENST00000512019 PUS3Q9BZE2 481 aaKnown RBP24.19■■□□□ 1.46
SMAD1-211ENST00000512019 ANKRD2Q9GZV1 360 aa24.19■■□□□ 1.46
SMAD1-211ENST00000512019 RWDD1Q9H446 243 aaPredicted RBP24.19■■□□□ 1.46
SMAD1-211ENST00000512019 KCNQ5Q9NR82 932 aa24.19■■□□□ 1.46
SMAD1-211ENST00000512019 MINPP1Q9UNW1 487 aa24.19■■□□□ 1.46
SMAD1-211ENST00000512019 RIPOR2Q9Y4F9 1068 aa24.19■■□□□ 1.46
SMAD1-211ENST00000512019 AOC2O75106 756 aa24.18■■□□□ 1.46
SMAD1-211ENST00000512019 ECE1P42892 770 aa24.18■■□□□ 1.46
SMAD1-211ENST00000512019 DOK7Q18PE1 504 aa24.18■■□□□ 1.46
SMAD1-211ENST00000512019 DLK2Q6UY11 383 aa24.18■■□□□ 1.46
SMAD1-211ENST00000512019 PSME4Q14997 1843 aa24.17■■□□□ 1.46
SMAD1-211ENST00000512019 XDHP47989 1333 aa24.17■■□□□ 1.46
SMAD1-211ENST00000512019 CHRNDQ07001 517 aa24.17■■□□□ 1.46
SMAD1-211ENST00000512019 METTL24Q5JXM2 366 aa24.17■■□□□ 1.46
SMAD1-211ENST00000512019 ATG9AQ7Z3C6 839 aa24.17■■□□□ 1.46
SMAD1-211ENST00000512019 SAMD7Q7Z3H4 446 aa24.17■■□□□ 1.46
SMAD1-211ENST00000512019 ERC1Q8IUD2 1116 aa24.17■■□□□ 1.46
SMAD1-211ENST00000512019 TBC1D16Q8TBP0 767 aa24.17■■□□□ 1.46
SMAD1-211ENST00000512019 ZNF408Q9H9D4 720 aa24.17■■□□□ 1.46
SMAD1-211ENST00000512019 ANKIB1Q9P2G1 1089 aa24.17■■□□□ 1.46
SMAD1-211ENST00000512019 H7C1D1 291 aa24.16■■□□□ 1.46
SMAD1-211ENST00000512019 ECE2O60344 883 aa24.16■■□□□ 1.46
SMAD1-211ENST00000512019 EGFRP00533 1210 aa24.16■■□□□ 1.46
SMAD1-211ENST00000512019 SAPCD2Q86UD0 394 aa24.16■■□□□ 1.46
SMAD1-211ENST00000512019 ZC3H15Q8WU90 426 aaKnown RBP24.16■■□□□ 1.46
SMAD1-211ENST00000512019 EXOC6BQ9Y2D4 811 aa24.16■■□□□ 1.46
SMAD1-211ENST00000512019 A0A1B0GUL6 1792 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms