RNA–Protein interactions for RNA: ENST00000505957.1

CPNE4-206, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-206ENST00000505957 AAMPQ13685 434 aa13.58□□□□□ -0.24
CPNE4-206ENST00000505957 PKN2Q16513 984 aaKnown RBP13.58□□□□□ -0.24
CPNE4-206ENST00000505957 RIC3Q7Z5B4 369 aa13.58□□□□□ -0.24
CPNE4-206ENST00000505957 PODNQ7Z5L7 613 aa13.58□□□□□ -0.24
CPNE4-206ENST00000505957 CCDC191Q8NCU4 936 aa13.58□□□□□ -0.24
CPNE4-206ENST00000505957 PDE4DIPQ5VU43 2346 aa13.58□□□□□ -0.24
CPNE4-206ENST00000505957 POLR2AP24928 1970 aaKnown RBP13.58□□□□□ -0.24
CPNE4-206ENST00000505957 PLIN1O60240 522 aa13.57□□□□□ -0.24
CPNE4-206ENST00000505957 PDE8AO60658 829 aa13.57□□□□□ -0.24
CPNE4-206ENST00000505957 BCAR3O75815 825 aa13.57□□□□□ -0.24
CPNE4-206ENST00000505957 PCCAP05165 728 aaPredicted RBP13.57□□□□□ -0.24
CPNE4-206ENST00000505957 USP17L8P0C7I0 530 aa13.57□□□□□ -0.24
CPNE4-206ENST00000505957 SOX10P56693 466 aa13.57□□□□□ -0.24
CPNE4-206ENST00000505957 EXOC6Q8TAG9 804 aa13.57□□□□□ -0.24
CPNE4-206ENST00000505957 MYOZ2Q9NPC6 264 aa13.57□□□□□ -0.24
CPNE4-206ENST00000505957 MBIPQ9NS73 344 aa13.57□□□□□ -0.24
CPNE4-206ENST00000505957 XDHP47989 1333 aa13.57□□□□□ -0.24
CPNE4-206ENST00000505957 USP17L3A6NCW0 530 aa13.56□□□□□ -0.24
CPNE4-206ENST00000505957 USP17L4A6NCW7 530 aa13.56□□□□□ -0.24
CPNE4-206ENST00000505957 MS4A1P11836 297 aa13.56□□□□□ -0.24
CPNE4-206ENST00000505957 ATP2B4P23634 1241 aa13.56□□□□□ -0.24
CPNE4-206ENST00000505957 USP17L1Q7RTZ2 530 aa13.56□□□□□ -0.24
CPNE4-206ENST00000505957 CRBNQ96SW2 442 aa13.56□□□□□ -0.24
CPNE4-206ENST00000505957 KIF16BQ96L93 1317 aa13.56□□□□□ -0.24
CPNE4-206ENST00000505957 SCN9AQ15858 1988 aa13.56□□□□□ -0.24
CPNE4-206ENST00000505957 NOM1Q5C9Z4 860 aaKnown RBP13.55□□□□□ -0.24
CPNE4-206ENST00000505957 ANKRD18AQ8IVF6 992 aa13.55□□□□□ -0.24
CPNE4-206ENST00000505957 MYD88Q99836 296 aa13.55□□□□□ -0.24
CPNE4-206ENST00000505957 PAPPA2Q9BXP8 1791 aa13.55□□□□□ -0.24
CPNE4-206ENST00000505957 TM4SF4P48230 202 aa13.54□□□□□ -0.24
CPNE4-206ENST00000505957 MMP14P50281 582 aa13.54□□□□□ -0.24
CPNE4-206ENST00000505957 C20orf194Q5TEA3 1177 aa13.54□□□□□ -0.24
CPNE4-206ENST00000505957 PRPF38BQ5VTL8 546 aaKnown RBP13.54□□□□□ -0.24
CPNE4-206ENST00000505957 METTL22Q9BUU2 404 aaPredicted RBP13.54□□□□□ -0.24
CPNE4-206ENST00000505957 CHMP4AQ9BY43 222 aa13.54□□□□□ -0.24
CPNE4-206ENST00000505957 PHAXQ9H814 394 aaKnown RBP13.54□□□□□ -0.24
CPNE4-206ENST00000505957 CWC25Q9NXE8 425 aaPredicted RBP13.54□□□□□ -0.24
CPNE4-206ENST00000505957 HPS5Q9UPZ3 1129 aa13.54□□□□□ -0.24
CPNE4-206ENST00000505957 AKAP11Q9UKA4 1901 aa13.54□□□□□ -0.24
CPNE4-206ENST00000505957 VAMP4O75379 141 aa13.53□□□□□ -0.24
CPNE4-206ENST00000505957 CCDC136Q96JN2 1154 aa13.53□□□□□ -0.24
CPNE4-206ENST00000505957 CDC5LQ99459 802 aaKnown RBP13.53□□□□□ -0.24
CPNE4-206ENST00000505957 HDAC9Q9UKV0 1011 aa13.53□□□□□ -0.24
CPNE4-206ENST00000505957 UBE2Q2LH0YL09 131 aa13.52□□□□□ -0.25
CPNE4-206ENST00000505957 DDX58O95786 925 aaKnown RBP13.52□□□□□ -0.25
CPNE4-206ENST00000505957 ZKSCAN2Q63HK3 967 aa13.52□□□□□ -0.25
CPNE4-206ENST00000505957 B4GALNT3Q6L9W6 998 aa13.52□□□□□ -0.25
CPNE4-206ENST00000505957 OGFOD1Q8N543 542 aa13.52□□□□□ -0.25
CPNE4-206ENST00000505957 ZNF296Q8WUU4 475 aaPredicted RBP13.52□□□□□ -0.25
CPNE4-206ENST00000505957 SSH1Q8WYL5 1049 aa13.52□□□□□ -0.25
CPNE4-206ENST00000505957 ARHGAP45Q92619 1136 aa13.52□□□□□ -0.25
CPNE4-206ENST00000505957 CFHR5Q9BXR6 569 aa13.52□□□□□ -0.25
CPNE4-206ENST00000505957 SMC4Q9NTJ3 1288 aa13.52□□□□□ -0.25
CPNE4-206ENST00000505957 BSDC1Q9NW68 430 aaPredicted RBP13.52□□□□□ -0.25
CPNE4-206ENST00000505957 MYO3BQ8WXR4 1341 aa13.52□□□□□ -0.25
CPNE4-206ENST00000505957 MED23Q9ULK4 1368 aa13.52□□□□□ -0.25
CPNE4-206ENST00000505957 TNRC18O15417 2968 aaPredicted RBP13.51□□□□□ -0.25
CPNE4-206ENST00000505957 TBC1D8O95759 1140 aa13.51□□□□□ -0.25
CPNE4-206ENST00000505957 NF2P35240 595 aa13.51□□□□□ -0.25
CPNE4-206ENST00000505957 NBPF9Q3BBW0 867 aa13.51□□□□□ -0.25
CPNE4-206ENST00000505957 DACT2Q5SW24 774 aa13.51□□□□□ -0.25
CPNE4-206ENST00000505957 STRIP1Q5VSL9 837 aa13.51□□□□□ -0.25
CPNE4-206ENST00000505957 MOB2Q70IA6 237 aa13.51□□□□□ -0.25
CPNE4-206ENST00000505957 CCDC85AQ96PX6 553 aaPredicted RBP13.51□□□□□ -0.25
CPNE4-206ENST00000505957 MINPP1Q9UNW1 487 aa13.51□□□□□ -0.25
CPNE4-206ENST00000505957 PSME4Q14997 1843 aa13.5□□□□□ -0.25
CPNE4-206ENST00000505957 GPR25O00155 361 aa13.5□□□□□ -0.25
CPNE4-206ENST00000505957 WNT10BO00744 389 aa13.5□□□□□ -0.25
CPNE4-206ENST00000505957 IPO8O15397 1037 aaKnown RBP13.5□□□□□ -0.25
CPNE4-206ENST00000505957 CTSWP56202 376 aa13.5□□□□□ -0.25
CPNE4-206ENST00000505957 SREBF2Q12772 1141 aa13.5□□□□□ -0.25
CPNE4-206ENST00000505957 TWISTNBQ3B726 338 aaPredicted RBP13.5□□□□□ -0.25
CPNE4-206ENST00000505957 TTLL11Q8NHH1 800 aa13.5□□□□□ -0.25
CPNE4-206ENST00000505957 JARID2Q92833 1246 aaPredicted RBP13.5□□□□□ -0.25
CPNE4-206ENST00000505957 COA1Q9GZY4 146 aa13.5□□□□□ -0.25
CPNE4-206ENST00000505957 ELL2O00472 640 aaPredicted RBP13.49□□□□□ -0.25
CPNE4-206ENST00000505957 CCT4P50991 539 aaKnown RBP13.49□□□□□ -0.25
CPNE4-206ENST00000505957 TTLL12Q14166 644 aaPredicted RBP13.49□□□□□ -0.25
CPNE4-206ENST00000505957 CCDC30Q5VVM6 783 aa13.49□□□□□ -0.25
CPNE4-206ENST00000505957 PRAMEF18Q5VWM3 479 aa13.49□□□□□ -0.25
CPNE4-206ENST00000505957 FBXO46Q6PJ61 603 aaPredicted RBP13.49□□□□□ -0.25
CPNE4-206ENST00000505957 ATF7IPQ6VMQ6 1270 aa13.49□□□□□ -0.25
CPNE4-206ENST00000505957 LEMD3Q9Y2U8 911 aa13.49□□□□□ -0.25
CPNE4-206ENST00000505957 WTIPA6NIX2 430 aaPredicted RBP13.48□□□□□ -0.25
CPNE4-206ENST00000505957 KSR2Q6VAB6 950 aa13.48□□□□□ -0.25
CPNE4-206ENST00000505957 ARMC9Q7Z3E5 817 aa13.48□□□□□ -0.25
CPNE4-206ENST00000505957 MRPL50Q8N5N7 158 aaKnown RBP13.48□□□□□ -0.25
CPNE4-206ENST00000505957 TSPYL6Q8N831 410 aa13.48□□□□□ -0.25
CPNE4-206ENST00000505957 C8orf58Q8NAV2 365 aa13.48□□□□□ -0.25
CPNE4-206ENST00000505957 SCAF8Q9UPN6 1271 aaKnown RBP13.48□□□□□ -0.25
CPNE4-206ENST00000505957 MAP3K2Q9Y2U5 619 aa13.48□□□□□ -0.25
CPNE4-206ENST00000505957 FKTNO75072 461 aa13.47□□□□□ -0.25
CPNE4-206ENST00000505957 ALDH1A1P00352 501 aa13.47□□□□□ -0.25
CPNE4-206ENST00000505957 IGKV5-2P06315 115 aa13.47□□□□□ -0.25
CPNE4-206ENST00000505957 TRIM27P14373 513 aa13.47□□□□□ -0.25
CPNE4-206ENST00000505957 PTPN12Q05209 780 aaKnown RBP13.47□□□□□ -0.25
CPNE4-206ENST00000505957 LDLRAD1Q5T700 205 aa13.47□□□□□ -0.25
CPNE4-206ENST00000505957 APOBEC3FQ8IUX4 373 aaKnown RBP13.47□□□□□ -0.25
CPNE4-206ENST00000505957 DZIP1LQ8IYY4 767 aaKnown RBP13.47□□□□□ -0.25
CPNE4-206ENST00000505957 ZBED3Q96IU2 234 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms