RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 PUM3Q15397 648 aaKnown RBP17.33■□□□□ 0.36
CCM2-217ENST00000492883 ZNF804AQ7Z570 1209 aa17.33■□□□□ 0.36
CCM2-217ENST00000492883 C16orf71Q8IYS4 520 aaPredicted RBP17.33■□□□□ 0.36
CCM2-217ENST00000492883 VGLL2Q8N8G2 317 aa17.33■□□□□ 0.36
CCM2-217ENST00000492883 SSH3Q8TE77 659 aa17.33■□□□□ 0.36
CCM2-217ENST00000492883 IQCA1LA6NCM1 817 aa17.32■□□□□ 0.36
CCM2-217ENST00000492883 POTECB2RU33 542 aa17.32■□□□□ 0.36
CCM2-217ENST00000492883 PSMD14O00487 310 aa17.32■□□□□ 0.36
CCM2-217ENST00000492883 SURF6O75683 361 aaKnown RBP17.32■□□□□ 0.36
CCM2-217ENST00000492883 IFIT1P09914 478 aaKnown RBP17.32■□□□□ 0.36
CCM2-217ENST00000492883 LMOD1P29536 600 aaPredicted RBP17.32■□□□□ 0.36
CCM2-217ENST00000492883 OS9Q13438 667 aaPredicted RBP17.32■□□□□ 0.36
CCM2-217ENST00000492883 RPAP2Q8IXW5 612 aaPredicted RBP17.32■□□□□ 0.36
CCM2-217ENST00000492883 FBXW7Q969H0 707 aa17.32■□□□□ 0.36
CCM2-217ENST00000492883 L3MBTL3Q96JM7 780 aaPredicted RBP17.32■□□□□ 0.36
CCM2-217ENST00000492883 CD209Q9NNX6 404 aa17.32■□□□□ 0.36
CCM2-217ENST00000492883 SUPT16HQ9Y5B9 1047 aaKnown RBP17.32■□□□□ 0.36
CCM2-217ENST00000492883 KIF3CO14782 793 aa17.31■□□□□ 0.36
CCM2-217ENST00000492883 SLC5A1P13866 664 aa17.31■□□□□ 0.36
CCM2-217ENST00000492883 HIBADHP31937 336 aaKnown RBP17.31■□□□□ 0.36
CCM2-217ENST00000492883 CAVIN4Q5BKX8 364 aa17.31■□□□□ 0.36
CCM2-217ENST00000492883 VPS37DQ86XT2 251 aa17.31■□□□□ 0.36
CCM2-217ENST00000492883 LPIN2Q92539 896 aa17.31■□□□□ 0.36
CCM2-217ENST00000492883 HACL1Q9UJ83 578 aa17.31■□□□□ 0.36
CCM2-217ENST00000492883 USP17L3A6NCW0 530 aa17.3■□□□□ 0.36
CCM2-217ENST00000492883 USP17L4A6NCW7 530 aa17.3■□□□□ 0.36
CCM2-217ENST00000492883 HMMRO75330 724 aa17.3■□□□□ 0.36
CCM2-217ENST00000492883 GYG1P46976 350 aa17.3■□□□□ 0.36
CCM2-217ENST00000492883 GMPSP49915 693 aaPredicted RBP17.3■□□□□ 0.36
CCM2-217ENST00000492883 TFCP2Q12800 502 aa17.3■□□□□ 0.36
CCM2-217ENST00000492883 USP17L1Q7RTZ2 530 aa17.3■□□□□ 0.36
CCM2-217ENST00000492883 FAM84BQ96KN1 310 aaPredicted RBP17.3■□□□□ 0.36
CCM2-217ENST00000492883 ZBTB12Q9Y330 459 aaPredicted RBP17.3■□□□□ 0.36
CCM2-217ENST00000492883 IRS2Q9Y4H2 1338 aa17.29■□□□□ 0.36
CCM2-217ENST00000492883 VIL1P09327 827 aaKnown RBP17.29■□□□□ 0.36
CCM2-217ENST00000492883 FGFR2P21802 821 aa17.29■□□□□ 0.36
CCM2-217ENST00000492883 ATP2B3Q16720 1220 aa17.29■□□□□ 0.36
CCM2-217ENST00000492883 TTLL5Q6EMB2 1281 aa17.29■□□□□ 0.36
CCM2-217ENST00000492883 CRBNQ96SW2 442 aa17.29■□□□□ 0.36
CCM2-217ENST00000492883 AKAP2Q9Y2D5 859 aa17.29■□□□□ 0.36
CCM2-217ENST00000492883 LTBP1Q14766 1721 aa17.29■□□□□ 0.36
CCM2-217ENST00000492883 EPHX2P34913 555 aa17.28■□□□□ 0.36
CCM2-217ENST00000492883 SCNN1DP51172 638 aa17.28■□□□□ 0.36
CCM2-217ENST00000492883 GTF2IP78347 998 aa17.28■□□□□ 0.36
CCM2-217ENST00000492883 STRIP1Q5VSL9 837 aa17.28■□□□□ 0.36
CCM2-217ENST00000492883 FBXO33Q7Z6M2 555 aa17.28■□□□□ 0.36
CCM2-217ENST00000492883 TAF1DQ9H5J8 278 aaPredicted RBP17.28■□□□□ 0.36
CCM2-217ENST00000492883 GPRC5DQ9NZD1 345 aa17.28■□□□□ 0.36
CCM2-217ENST00000492883 NOP58Q9Y2X3 529 aaKnown RBP17.28■□□□□ 0.36
CCM2-217ENST00000492883 TIAM2Q8IVF5 1701 aa17.27■□□□□ 0.36
CCM2-217ENST00000492883 FRAT2O75474 233 aaPredicted RBP17.27■□□□□ 0.36
CCM2-217ENST00000492883 TOMM70O94826 608 aa17.27■□□□□ 0.36
CCM2-217ENST00000492883 IL1R1P14778 569 aa17.27■□□□□ 0.36
CCM2-217ENST00000492883 RPS12P25398 132 aaKnown RBP17.27■□□□□ 0.36
CCM2-217ENST00000492883 EPS15P42566 896 aa17.27■□□□□ 0.36
CCM2-217ENST00000492883 BCAMP50895 628 aa17.27■□□□□ 0.36
CCM2-217ENST00000492883 TIMM10P62072 90 aa17.27■□□□□ 0.36
CCM2-217ENST00000492883 EAPPQ56P03 285 aaPredicted RBP17.27■□□□□ 0.36
CCM2-217ENST00000492883 RSBN1LQ6PCB5 846 aaPredicted RBP17.27■□□□□ 0.36
CCM2-217ENST00000492883 DPF2Q92785 391 aa17.27■□□□□ 0.36
CCM2-217ENST00000492883 CNOT7Q9UIV1 285 aaKnown RBP17.27■□□□□ 0.36
CCM2-217ENST00000492883 CCDC88AQ3V6T2 1871 aa17.27■□□□□ 0.35
CCM2-217ENST00000492883 SPEF2Q9C093 1822 aa17.26■□□□□ 0.35
CCM2-217ENST00000492883 H7C1D1 291 aa17.26■□□□□ 0.35
CCM2-217ENST00000492883 SASH1O94885 1247 aa17.26■□□□□ 0.35
CCM2-217ENST00000492883 HSP90AB4PQ58FF6 505 aa17.26■□□□□ 0.35
CCM2-217ENST00000492883 PNMA8AQ86V59 439 aaPredicted RBP17.26■□□□□ 0.35
CCM2-217ENST00000492883 SIRT2Q8IXJ6 389 aa17.26■□□□□ 0.35
CCM2-217ENST00000492883 AGBL3Q8NEM8 1001 aa17.26■□□□□ 0.35
CCM2-217ENST00000492883 TDRD7Q8NHU6 1098 aaKnown RBP17.26■□□□□ 0.35
CCM2-217ENST00000492883 NEUROD6Q96NK8 337 aa17.26■□□□□ 0.35
CCM2-217ENST00000492883 A0A1B0GUL7 405 aa17.25■□□□□ 0.35
CCM2-217ENST00000492883 DACT2Q5SW24 774 aa17.25■□□□□ 0.35
CCM2-217ENST00000492883 MICALL2Q8IY33 904 aa17.25■□□□□ 0.35
CCM2-217ENST00000492883 MXD3Q9BW11 206 aa17.25■□□□□ 0.35
CCM2-217ENST00000492883 IQSEC3Q9UPP2 1182 aaPredicted RBP17.25■□□□□ 0.35
CCM2-217ENST00000492883 CLEC11AQ9Y240 323 aa17.25■□□□□ 0.35
CCM2-217ENST00000492883 EXOC6BQ9Y2D4 811 aa17.25■□□□□ 0.35
CCM2-217ENST00000492883 DICER1Q9UPY3 1922 aaKnown RBP17.25■□□□□ 0.35
CCM2-217ENST00000492883 ERC1Q8IUD2 1116 aa17.24■□□□□ 0.35
CCM2-217ENST00000492883 ADARB2Q9NS39 739 aaKnown RBP17.24■□□□□ 0.35
CCM2-217ENST00000492883 GNL3LQ9NVN8 582 aaKnown RBP17.24■□□□□ 0.35
CCM2-217ENST00000492883 JAG2Q9Y219 1238 aa17.24■□□□□ 0.35
CCM2-217ENST00000492883 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.24■□□□□ 0.35
CCM2-217ENST00000492883 MYO3BQ8WXR4 1341 aa17.23■□□□□ 0.35
CCM2-217ENST00000492883 SHTN1A0MZ66 631 aa17.23■□□□□ 0.35
CCM2-217ENST00000492883 ADORA1P30542 326 aa17.23■□□□□ 0.35
CCM2-217ENST00000492883 GORABQ5T7V8 394 aa17.23■□□□□ 0.35
CCM2-217ENST00000492883 RBM26Q5T8P6 1007 aaKnown RBP17.23■□□□□ 0.35
CCM2-217ENST00000492883 USP50Q70EL3 339 aaPredicted RBP17.23■□□□□ 0.35
CCM2-217ENST00000492883 XAGE2Q96GT9 111 aa17.23■□□□□ 0.35
CCM2-217ENST00000492883 WDR90Q96KV7 1748 aa17.22■□□□□ 0.35
CCM2-217ENST00000492883 APBB1O00213 710 aa17.22■□□□□ 0.35
CCM2-217ENST00000492883 USP17L8P0C7I0 530 aa17.22■□□□□ 0.35
CCM2-217ENST00000492883 CHAF1AQ13111 956 aaPredicted RBP17.22■□□□□ 0.35
CCM2-217ENST00000492883 OGFOD1Q8N543 542 aa17.22■□□□□ 0.35
CCM2-217ENST00000492883 RBM46Q8TBY0 533 aaKnown RBP17.22■□□□□ 0.35
CCM2-217ENST00000492883 GPR108Q9NPR9 543 aa17.22■□□□□ 0.35
CCM2-217ENST00000492883 POTEIP0CG38 1075 aa17.21■□□□□ 0.35
CCM2-217ENST00000492883 POTEJP0CG39 1038 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms