RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 SNAP23O00161 211 aa16.42■□□□□ 0.22
SF1-216ENST00000486867 PSMD14O00487 310 aa16.42■□□□□ 0.22
SF1-216ENST00000486867 PLIN1O60240 522 aa16.42■□□□□ 0.22
SF1-216ENST00000486867 RAD17O75943 681 aa16.42■□□□□ 0.22
SF1-216ENST00000486867 PDE8BO95263 885 aa16.42■□□□□ 0.22
SF1-216ENST00000486867 FGFR2P21802 821 aa16.42■□□□□ 0.22
SF1-216ENST00000486867 RPS12P25398 132 aaKnown RBP16.42■□□□□ 0.22
SF1-216ENST00000486867 POLA2Q14181 598 aa16.42■□□□□ 0.22
SF1-216ENST00000486867 SSH3Q8TE77 659 aa16.42■□□□□ 0.22
SF1-216ENST00000486867 DPF2Q92785 391 aa16.42■□□□□ 0.22
SF1-216ENST00000486867 KCNQ5Q9NR82 932 aa16.42■□□□□ 0.22
SF1-216ENST00000486867 GPRC5DQ9NZD1 345 aa16.42■□□□□ 0.22
SF1-216ENST00000486867 HACL1Q9UJ83 578 aa16.42■□□□□ 0.22
SF1-216ENST00000486867 ECM29Q5VYK3 1845 aa16.42■□□□□ 0.22
SF1-216ENST00000486867 PNMA6EA0A0J9YXQ4 647 aa16.41■□□□□ 0.22
SF1-216ENST00000486867 SRGAP3O43295 1099 aa16.41■□□□□ 0.22
SF1-216ENST00000486867 IL1R1P14778 569 aa16.41■□□□□ 0.22
SF1-216ENST00000486867 C1QTNF8P60827 252 aa16.41■□□□□ 0.22
SF1-216ENST00000486867 GMLQ99445 158 aa16.41■□□□□ 0.22
SF1-216ENST00000486867 ZBTB40Q9NUA8 1239 aa16.41■□□□□ 0.22
SF1-216ENST00000486867 DDX19BQ9UMR2 479 aa16.41■□□□□ 0.22
SF1-216ENST00000486867 GJA3Q9Y6H8 435 aa16.41■□□□□ 0.22
SF1-216ENST00000486867 TRPM7Q96QT4 1865 aa16.41■□□□□ 0.22
SF1-216ENST00000486867 ZBTB22O15209 634 aa16.4■□□□□ 0.22
SF1-216ENST00000486867 IL15P40933 162 aaPredicted RBP16.4■□□□□ 0.22
SF1-216ENST00000486867 KCNJ4P48050 445 aa16.4■□□□□ 0.22
SF1-216ENST00000486867 GMPSP49915 693 aaPredicted RBP16.4■□□□□ 0.22
SF1-216ENST00000486867 ATP8B2P98198 1209 aa16.4■□□□□ 0.22
SF1-216ENST00000486867 METTL24Q5JXM2 366 aa16.4■□□□□ 0.22
SF1-216ENST00000486867 CD209Q9NNX6 404 aa16.4■□□□□ 0.22
SF1-216ENST00000486867 EPHX2P34913 555 aa16.39■□□□□ 0.21
SF1-216ENST00000486867 FSTL1Q12841 308 aa16.39■□□□□ 0.21
SF1-216ENST00000486867 C20orf194Q5TEA3 1177 aa16.39■□□□□ 0.21
SF1-216ENST00000486867 AGBL3Q8NEM8 1001 aa16.39■□□□□ 0.21
SF1-216ENST00000486867 PA2G4Q9UQ80 394 aaKnown RBP16.39■□□□□ 0.21
SF1-216ENST00000486867 USP17L3A6NCW0 530 aa16.38■□□□□ 0.21
SF1-216ENST00000486867 USP17L4A6NCW7 530 aa16.38■□□□□ 0.21
SF1-216ENST00000486867 EPS15P42566 896 aa16.38■□□□□ 0.21
SF1-216ENST00000486867 PUM3Q15397 648 aaKnown RBP16.38■□□□□ 0.21
SF1-216ENST00000486867 DACT2Q5SW24 774 aa16.38■□□□□ 0.21
SF1-216ENST00000486867 STRIP1Q5VSL9 837 aa16.38■□□□□ 0.21
SF1-216ENST00000486867 RSBN1LQ6PCB5 846 aaPredicted RBP16.38■□□□□ 0.21
SF1-216ENST00000486867 USP17L1Q7RTZ2 530 aa16.38■□□□□ 0.21
SF1-216ENST00000486867 ZNF804AQ7Z570 1209 aa16.38■□□□□ 0.21
SF1-216ENST00000486867 FBXO33Q7Z6M2 555 aa16.38■□□□□ 0.21
SF1-216ENST00000486867 PNMA8AQ86V59 439 aaPredicted RBP16.38■□□□□ 0.21
SF1-216ENST00000486867 FAM84BQ96KN1 310 aaPredicted RBP16.38■□□□□ 0.21
SF1-216ENST00000486867 COG6Q9Y2V7 657 aa16.38■□□□□ 0.21
SF1-216ENST00000486867 G3V3G9 751 aa16.37■□□□□ 0.21
SF1-216ENST00000486867 LMOD1P29536 600 aaPredicted RBP16.37■□□□□ 0.21
SF1-216ENST00000486867 DCAF8Q5TAQ9 597 aa16.37■□□□□ 0.21
SF1-216ENST00000486867 CEP85Q6P2H3 762 aa16.37■□□□□ 0.21
SF1-216ENST00000486867 USP50Q70EL3 339 aaPredicted RBP16.37■□□□□ 0.21
SF1-216ENST00000486867 LDHDQ86WU2 507 aa16.37■□□□□ 0.21
SF1-216ENST00000486867 C16orf71Q8IYS4 520 aaPredicted RBP16.37■□□□□ 0.21
SF1-216ENST00000486867 TDRD7Q8NHU6 1098 aaKnown RBP16.37■□□□□ 0.21
SF1-216ENST00000486867 CHMP4BQ9H444 224 aaKnown RBP16.37■□□□□ 0.21
SF1-216ENST00000486867 ADARB2Q9NS39 739 aaKnown RBP16.37■□□□□ 0.21
SF1-216ENST00000486867 NOP58Q9Y2X3 529 aaKnown RBP16.37■□□□□ 0.21
SF1-216ENST00000486867 FAM205AQ6ZU69 1335 aa16.37■□□□□ 0.21
SF1-216ENST00000486867 MMP14P50281 582 aa16.36■□□□□ 0.21
SF1-216ENST00000486867 RRP1P56182 461 aaKnown RBP16.36■□□□□ 0.21
SF1-216ENST00000486867 ZNF280AP59817 542 aaPredicted RBP16.36■□□□□ 0.21
SF1-216ENST00000486867 FKBP1AP62942 108 aaKnown RBP16.36■□□□□ 0.21
SF1-216ENST00000486867 SMC1BQ8NDV3 1235 aa16.36■□□□□ 0.21
SF1-216ENST00000486867 LPIN2Q92539 896 aa16.36■□□□□ 0.21
SF1-216ENST00000486867 SIL1Q9H173 461 aa16.36■□□□□ 0.21
SF1-216ENST00000486867 C1orf115Q9H7X2 142 aa16.36■□□□□ 0.21
SF1-216ENST00000486867 CEP126Q9P2H0 1117 aa16.36■□□□□ 0.21
SF1-216ENST00000486867 PGAP2Q9UHJ9 254 aa16.36■□□□□ 0.21
SF1-216ENST00000486867 CNOT7Q9UIV1 285 aaKnown RBP16.36■□□□□ 0.21
SF1-216ENST00000486867 ZBTB12Q9Y330 459 aaPredicted RBP16.36■□□□□ 0.21
SF1-216ENST00000486867 AKAP11Q9UKA4 1901 aa16.36■□□□□ 0.21
SF1-216ENST00000486867 MYO3BQ8WXR4 1341 aa16.36■□□□□ 0.21
SF1-216ENST00000486867 POTEIP0CG38 1075 aa16.35■□□□□ 0.21
SF1-216ENST00000486867 POTEJP0CG39 1038 aa16.35■□□□□ 0.21
SF1-216ENST00000486867 HIBADHP31937 336 aaKnown RBP16.35■□□□□ 0.21
SF1-216ENST00000486867 SASH1O94885 1247 aa16.34■□□□□ 0.21
SF1-216ENST00000486867 IFIT1P09914 478 aaKnown RBP16.34■□□□□ 0.21
SF1-216ENST00000486867 GYG1P46976 350 aa16.34■□□□□ 0.21
SF1-216ENST00000486867 TTLL5Q6EMB2 1281 aa16.34■□□□□ 0.21
SF1-216ENST00000486867 CHADLQ6NUI6 762 aa16.34■□□□□ 0.21
SF1-216ENST00000486867 RPAP2Q8IXW5 612 aaPredicted RBP16.34■□□□□ 0.21
SF1-216ENST00000486867 MICALL2Q8IY33 904 aa16.34■□□□□ 0.21
SF1-216ENST00000486867 SHTN1A0MZ66 631 aa16.33■□□□□ 0.2
SF1-216ENST00000486867 SLC5A1P13866 664 aa16.33■□□□□ 0.2
SF1-216ENST00000486867 ATP2B3Q16720 1220 aa16.33■□□□□ 0.2
SF1-216ENST00000486867 ZC3H15Q8WU90 426 aaKnown RBP16.33■□□□□ 0.2
SF1-216ENST00000486867 H7C1D1 291 aa16.32■□□□□ 0.2
SF1-216ENST00000486867 HIRAP54198 1017 aaPredicted RBP16.32■□□□□ 0.2
SF1-216ENST00000486867 GTF2IP78347 998 aa16.32■□□□□ 0.2
SF1-216ENST00000486867 CAVIN4Q5BKX8 364 aa16.32■□□□□ 0.2
SF1-216ENST00000486867 SIRT2Q8IXJ6 389 aa16.32■□□□□ 0.2
SF1-216ENST00000486867 GPR108Q9NPR9 543 aa16.32■□□□□ 0.2
SF1-216ENST00000486867 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.32■□□□□ 0.2
SF1-216ENST00000486867 ITGBL1O95965 494 aaPredicted RBP16.31■□□□□ 0.2
SF1-216ENST00000486867 TFCP2Q12800 502 aa16.31■□□□□ 0.2
SF1-216ENST00000486867 CERS5Q8N5B7 392 aa16.31■□□□□ 0.2
SF1-216ENST00000486867 TRPM4Q8TD43 1214 aa16.31■□□□□ 0.2
SF1-216ENST00000486867 AKAP2Q9Y2D5 859 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms