RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 ZNF853P0CG23 659 aa12.14□□□□□ -0.47
VCL-204ENST00000472585 TM4SF4P48230 202 aa12.14□□□□□ -0.47
VCL-204ENST00000472585 LMOD3Q0VAK6 560 aa12.14□□□□□ -0.47
VCL-204ENST00000472585 SREBF2Q12772 1141 aa12.14□□□□□ -0.47
VCL-204ENST00000472585 RALBP1Q15311 655 aa12.14□□□□□ -0.47
VCL-204ENST00000472585 INTS3Q68E01 1043 aaKnown RBP12.14□□□□□ -0.47
VCL-204ENST00000472585 RSBN1LQ6PCB5 846 aaPredicted RBP12.14□□□□□ -0.47
VCL-204ENST00000472585 ZBTB38Q8NAP3 1195 aaPredicted RBP12.14□□□□□ -0.47
VCL-204ENST00000472585 MXD3Q9BW11 206 aa12.14□□□□□ -0.47
VCL-204ENST00000472585 MBIPQ9NS73 344 aa12.14□□□□□ -0.47
VCL-204ENST00000472585 HYPKQ9NX55 129 aa12.14□□□□□ -0.47
VCL-204ENST00000472585 UBE2Q2LH0YL09 131 aa12.13□□□□□ -0.47
VCL-204ENST00000472585 ELL2O00472 640 aaPredicted RBP12.13□□□□□ -0.47
VCL-204ENST00000472585 RUNDC1Q96C34 613 aa12.13□□□□□ -0.47
VCL-204ENST00000472585 MYD88Q99836 296 aa12.13□□□□□ -0.47
VCL-204ENST00000472585 PRKAR2AP13861 404 aaKnown RBP12.12□□□□□ -0.47
VCL-204ENST00000472585 NF2P35240 595 aa12.12□□□□□ -0.47
VCL-204ENST00000472585 FXR1P51114 621 aaKnown RBP eCLIP12.12□□□□□ -0.472e-6■□□□□ 10.4
VCL-204ENST00000472585 MKRN3Q13064 507 aaKnown RBP12.12□□□□□ -0.47
VCL-204ENST00000472585 NBPF9Q3BBW0 867 aa12.12□□□□□ -0.47
VCL-204ENST00000472585 RIC3Q7Z5B4 369 aa12.12□□□□□ -0.47
VCL-204ENST00000472585 C8orf58Q8NAV2 365 aa12.12□□□□□ -0.47
VCL-204ENST00000472585 AGBL3Q8NEM8 1001 aa12.12□□□□□ -0.47
VCL-204ENST00000472585 R3HDMLQ9H3Y0 253 aa12.12□□□□□ -0.47
VCL-204ENST00000472585 MYOZ2Q9NPC6 264 aa12.12□□□□□ -0.47
VCL-204ENST00000472585 ANKIB1Q9P2G1 1089 aa12.12□□□□□ -0.47
VCL-204ENST00000472585 GGA1Q9UJY5 639 aa12.12□□□□□ -0.47
VCL-204ENST00000472585 CEP290O15078 2479 aa12.12□□□□□ -0.47
VCL-204ENST00000472585 PITPNM2Q9BZ72 1349 aa12.11□□□□□ -0.47
VCL-204ENST00000472585 PCCAP05165 728 aaPredicted RBP12.11□□□□□ -0.47
VCL-204ENST00000472585 TXNRD3Q86VQ6 643 aa12.11□□□□□ -0.47
VCL-204ENST00000472585 TRIM17Q9Y577 477 aa12.11□□□□□ -0.47
VCL-204ENST00000472585 MKI67P46013 3256 aaKnown RBP12.1□□□□□ -0.47
VCL-204ENST00000472585 POTEFA5A3E0 1075 aa12.1□□□□□ -0.47
VCL-204ENST00000472585 ALDH1A1P00352 501 aa12.1□□□□□ -0.47
VCL-204ENST00000472585 USP17L8P0C7I0 530 aa12.1□□□□□ -0.47
VCL-204ENST00000472585 ZNF609O15014 1411 aa12.1□□□□□ -0.47
VCL-204ENST00000472585 USP17L3A6NCW0 530 aa12.09□□□□□ -0.47
VCL-204ENST00000472585 USP17L4A6NCW7 530 aa12.09□□□□□ -0.47
VCL-204ENST00000472585 PDE8AO60658 829 aa12.09□□□□□ -0.47
VCL-204ENST00000472585 IGKV5-2P06315 115 aa12.09□□□□□ -0.47
VCL-204ENST00000472585 DDX10Q13206 875 aaKnown RBP12.09□□□□□ -0.47
VCL-204ENST00000472585 USP17L1Q7RTZ2 530 aa12.09□□□□□ -0.47
VCL-204ENST00000472585 CCDC191Q8NCU4 936 aa12.09□□□□□ -0.47
VCL-204ENST00000472585 METTL22Q9BUU2 404 aaPredicted RBP12.09□□□□□ -0.47
VCL-204ENST00000472585 CFHR5Q9BXR6 569 aa12.09□□□□□ -0.47
VCL-204ENST00000472585 MINPP1Q9UNW1 487 aa12.09□□□□□ -0.47
VCL-204ENST00000472585 RBBP6Q7Z6E9 1792 aaKnown RBP12.09□□□□□ -0.47
VCL-204ENST00000472585 PSME4Q14997 1843 aa12.09□□□□□ -0.47
VCL-204ENST00000472585 CCDC152Q4G0S7 254 aa12.08□□□□□ -0.48
VCL-204ENST00000472585 DACT2Q5SW24 774 aa12.08□□□□□ -0.48
VCL-204ENST00000472585 ARMC9Q7Z3E5 817 aa12.08□□□□□ -0.48
VCL-204ENST00000472585 PODNQ7Z5L7 613 aa12.08□□□□□ -0.48
VCL-204ENST00000472585 TSPYL6Q8N831 410 aa12.08□□□□□ -0.48
VCL-204ENST00000472585 TTLL11Q8NHH1 800 aa12.08□□□□□ -0.48
VCL-204ENST00000472585 FZD1Q9UP38 647 aa12.08□□□□□ -0.48
VCL-204ENST00000472585 TRIOBPQ9H2D6 2365 aa12.08□□□□□ -0.48
VCL-204ENST00000472585 XDHP47989 1333 aa12.08□□□□□ -0.48
VCL-204ENST00000472585 MYBBP1AQ9BQG0 1328 aaKnown RBP12.08□□□□□ -0.48
VCL-204ENST00000472585 WNT10BO00744 389 aa12.07□□□□□ -0.48
VCL-204ENST00000472585 APAF1O14727 1248 aa12.07□□□□□ -0.48
VCL-204ENST00000472585 ATP2B4P23634 1241 aa12.07□□□□□ -0.48
VCL-204ENST00000472585 KLRK1P26718 216 aa12.07□□□□□ -0.48
VCL-204ENST00000472585 PTPN12Q05209 780 aaKnown RBP12.07□□□□□ -0.48
VCL-204ENST00000472585 GOLGA2Q08379 1002 aa12.07□□□□□ -0.48
VCL-204ENST00000472585 OTOP1Q7RTM1 612 aa12.07□□□□□ -0.48
VCL-204ENST00000472585 ANKRD18AQ8IVF6 992 aa12.07□□□□□ -0.48
VCL-204ENST00000472585 TMEM106CQ9BVX2 250 aa12.07□□□□□ -0.48
VCL-204ENST00000472585 GREM2Q9H772 168 aa12.07□□□□□ -0.48
VCL-204ENST00000472585 CWC25Q9NXE8 425 aaPredicted RBP12.07□□□□□ -0.48
VCL-204ENST00000472585 CENPFP49454 3210 aa12.06□□□□□ -0.48
VCL-204ENST00000472585 EN2P19622 333 aaPredicted RBP12.06□□□□□ -0.48
VCL-204ENST00000472585 CTSWP56202 376 aa12.06□□□□□ -0.48
VCL-204ENST00000472585 INHBEP58166 350 aa12.06□□□□□ -0.48
VCL-204ENST00000472585 PRKG1Q13976 671 aa12.06□□□□□ -0.48
VCL-204ENST00000472585 OGFOD1Q8N543 542 aa12.06□□□□□ -0.48
VCL-204ENST00000472585 ERO1AQ96HE7 468 aa12.06□□□□□ -0.48
VCL-204ENST00000472585 ZBED3Q96IU2 234 aaPredicted RBP12.06□□□□□ -0.48
VCL-204ENST00000472585 BSDC1Q9NW68 430 aaPredicted RBP12.06□□□□□ -0.48
VCL-204ENST00000472585 IFT57Q9NWB7 429 aa12.06□□□□□ -0.48
VCL-204ENST00000472585 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.06□□□□□ -0.48
VCL-204ENST00000472585 COLQQ9Y215 455 aaPredicted RBP12.06□□□□□ -0.48
VCL-204ENST00000472585 MAP3K2Q9Y2U5 619 aa12.06□□□□□ -0.48
VCL-204ENST00000472585 MANSC4A6NHS7 340 aaPredicted RBP12.05□□□□□ -0.48
VCL-204ENST00000472585 SNAP23O00161 211 aa12.05□□□□□ -0.48
VCL-204ENST00000472585 SASH1O94885 1247 aa12.05□□□□□ -0.48
VCL-204ENST00000472585 CCT4P50991 539 aaKnown RBP12.05□□□□□ -0.48
VCL-204ENST00000472585 CWF19L2Q2TBE0 894 aaKnown RBP12.05□□□□□ -0.48
VCL-204ENST00000472585 G2E3Q7L622 706 aa12.05□□□□□ -0.48
VCL-204ENST00000472585 FBXO3Q9UK99 471 aa12.05□□□□□ -0.48
VCL-204ENST00000472585 PTPN22Q9Y2R2 807 aa12.05□□□□□ -0.48
VCL-204ENST00000472585 PCDHAC2Q9Y5I4 1007 aa12.05□□□□□ -0.48
VCL-204ENST00000472585 HTTP42858 3142 aa12.05□□□□□ -0.48
VCL-204ENST00000472585 PI4KAP2A4QPH2 592 aa12.04□□□□□ -0.48
VCL-204ENST00000472585 WDR43Q15061 677 aaKnown RBP eCLIP12.04□□□□□ -0.48
VCL-204ENST00000472585 LDLRAD1Q5T700 205 aa12.04□□□□□ -0.48
VCL-204ENST00000472585 SPRYD7Q5W111 196 aa12.04□□□□□ -0.48
VCL-204ENST00000472585 PI4KAP1Q8N8J0 262 aa12.04□□□□□ -0.48
VCL-204ENST00000472585 AOX1Q06278 1338 aa12.04□□□□□ -0.48
VCL-204ENST00000472585 MED23Q9ULK4 1368 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms