RNA–Protein interactions for RNA: ENST00000470994.1

GPNMB-208, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 538 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-208ENST00000470994 SHISA2Q6UWI4 295 aa8.93□□□□□ -0.98
GPNMB-208ENST00000470994 DEPDC4Q8N2C3 294 aa8.93□□□□□ -0.98
GPNMB-208ENST00000470994 KDM5DQ9BY66 1539 aa8.93□□□□□ -0.98
GPNMB-208ENST00000470994 ADGBQ8N7X0 1667 aa8.92□□□□□ -0.98
GPNMB-208ENST00000470994 MYO3AQ8NEV4 1616 aa8.92□□□□□ -0.98
GPNMB-208ENST00000470994 NLRP1Q9C000 1473 aa8.92□□□□□ -0.98
GPNMB-208ENST00000470994 KANK1Q14678 1352 aa8.92□□□□□ -0.98
GPNMB-208ENST00000470994 KIF15Q9NS87 1388 aa8.92□□□□□ -0.98
GPNMB-208ENST00000470994 BTBD11A6QL63 1104 aa8.92□□□□□ -0.98
GPNMB-208ENST00000470994 RGS9O75916 674 aaPredicted RBP8.92□□□□□ -0.98
GPNMB-208ENST00000470994 DTWD1Q8N5C7 304 aa8.92□□□□□ -0.98
GPNMB-208ENST00000470994 DNMT1P26358 1616 aaKnown RBP8.91□□□□□ -0.98
GPNMB-208ENST00000470994 UGGT1Q9NYU2 1555 aa8.91□□□□□ -0.98
GPNMB-208ENST00000470994 PPP1R12BO60237 982 aaPredicted RBP8.91□□□□□ -0.98
GPNMB-208ENST00000470994 AFF1P51825 1210 aaKnown RBP8.91□□□□□ -0.98
GPNMB-208ENST00000470994 BTLAQ7Z6A9 289 aa8.91□□□□□ -0.98
GPNMB-208ENST00000470994 ZNF280CQ8ND82 737 aa8.91□□□□□ -0.98
GPNMB-208ENST00000470994 DNAJB12Q9NXW2 375 aaKnown RBP8.91□□□□□ -0.98
GPNMB-208ENST00000470994 IDI1Q13907 227 aa8.9□□□□□ -0.98
GPNMB-208ENST00000470994 PLEKHM2Q8IWE5 1019 aa8.9□□□□□ -0.98
GPNMB-208ENST00000470994 DMRTC2Q8IXT2 367 aaPredicted RBP8.9□□□□□ -0.98
GPNMB-208ENST00000470994 ABCC5O15440 1437 aa8.89□□□□□ -0.99
GPNMB-208ENST00000470994 PALM3A6NDB9 673 aaPredicted RBP8.89□□□□□ -0.99
GPNMB-208ENST00000470994 PROSER2Q86WR7 435 aaPredicted RBP8.89□□□□□ -0.99
GPNMB-208ENST00000470994 ALDH16A1Q8IZ83 802 aa8.89□□□□□ -0.99
GPNMB-208ENST00000470994 SLC26A8Q96RN1 970 aa8.89□□□□□ -0.99
GPNMB-208ENST00000470994 SSBP4Q9BWG4 385 aaPredicted RBP8.89□□□□□ -0.99
GPNMB-208ENST00000470994 RNF112Q9ULX5 631 aa8.89□□□□□ -0.99
GPNMB-208ENST00000470994 COG6Q9Y2V7 657 aa8.89□□□□□ -0.99
GPNMB-208ENST00000470994 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.89□□□□□ -0.99
GPNMB-208ENST00000470994 ARHGEF5Q12774 1597 aa8.89□□□□□ -0.99
GPNMB-208ENST00000470994 SPATA31D1Q6ZQQ2 1576 aa8.89□□□□□ -0.99
GPNMB-208ENST00000470994 CPS1P31327 1500 aa8.89□□□□□ -0.99
GPNMB-208ENST00000470994 ERVK-7P63135 1459 aa8.89□□□□□ -0.99
GPNMB-208ENST00000470994 ANKRD30AQ9BXX3 1397 aa8.88□□□□□ -0.99
GPNMB-208ENST00000470994 EPB42P16452 691 aa8.88□□□□□ -0.99
GPNMB-208ENST00000470994 STAG2Q8N3U4 1231 aa8.88□□□□□ -0.99
GPNMB-208ENST00000470994 LARGE2Q8N3Y3 721 aa8.88□□□□□ -0.99
GPNMB-208ENST00000470994 ABCC3O15438 1527 aa8.88□□□□□ -0.99
GPNMB-208ENST00000470994 USP17L3A6NCW0 530 aa8.87□□□□□ -0.99
GPNMB-208ENST00000470994 USP17L4A6NCW7 530 aa8.87□□□□□ -0.99
GPNMB-208ENST00000470994 CCINQ13939 588 aa8.87□□□□□ -0.99
GPNMB-208ENST00000470994 IER5Q5VY09 327 aa8.87□□□□□ -0.99
GPNMB-208ENST00000470994 MSL1Q68DK7 614 aa8.87□□□□□ -0.99
GPNMB-208ENST00000470994 USP17L2Q6R6M4 530 aa8.87□□□□□ -0.99
GPNMB-208ENST00000470994 USP17L1Q7RTZ2 530 aa8.87□□□□□ -0.99
GPNMB-208ENST00000470994 GAS2L2Q8NHY3 880 aa8.87□□□□□ -0.99
GPNMB-208ENST00000470994 KIAA1024Q9UPX6 916 aa8.87□□□□□ -0.99
GPNMB-208ENST00000470994 DUOX2Q9NRD8 1548 aa8.86□□□□□ -0.99
GPNMB-208ENST00000470994 ZNF142P52746 1687 aaPredicted RBP8.86□□□□□ -0.99
GPNMB-208ENST00000470994 MED14O60244 1454 aa8.86□□□□□ -0.99
GPNMB-208ENST00000470994 ZBTB7BO15156 539 aaPredicted RBP8.86□□□□□ -0.99
GPNMB-208ENST00000470994 PPP1R15AO75807 674 aaPredicted RBP8.86□□□□□ -0.99
GPNMB-208ENST00000470994 NFKB1P19838 968 aa8.86□□□□□ -0.99
GPNMB-208ENST00000470994 ITGAEP38570 1179 aa8.86□□□□□ -0.99
GPNMB-208ENST00000470994 CLDN10P78369 228 aa8.86□□□□□ -0.99
GPNMB-208ENST00000470994 FAM35AQ86V20 835 aa8.86□□□□□ -0.99
GPNMB-208ENST00000470994 OGFOD1Q8N543 542 aa8.86□□□□□ -0.99
GPNMB-208ENST00000470994 WFDC12Q8WWY7 111 aa8.86□□□□□ -0.99
GPNMB-208ENST00000470994 GOLGA2P5Q9HBQ8 144 aa8.86□□□□□ -0.99
GPNMB-208ENST00000470994 FRRS1LQ9P0K9 344 aa8.86□□□□□ -0.99
GPNMB-208ENST00000470994 NAGPAQ9UK23 515 aa8.86□□□□□ -0.99
GPNMB-208ENST00000470994 MAP3K1Q13233 1512 aa8.85□□□□□ -0.99
GPNMB-208ENST00000470994 SCAF11Q99590 1463 aaKnown RBP8.85□□□□□ -0.99
GPNMB-208ENST00000470994 KCNA6P17658 529 aa8.85□□□□□ -0.99
GPNMB-208ENST00000470994 FBXO11Q86XK2 927 aa8.85□□□□□ -0.99
GPNMB-208ENST00000470994 WFDC8Q8IUA0 241 aa8.85□□□□□ -0.99
GPNMB-208ENST00000470994 GSX2Q9BZM3 304 aa8.85□□□□□ -0.99
GPNMB-208ENST00000470994 DAPK1P53355 1430 aa8.85□□□□□ -0.99
GPNMB-208ENST00000470994 FGD6Q6ZV73 1430 aa8.85□□□□□ -0.99
GPNMB-208ENST00000470994 NEURL4Q96JN8 1562 aa8.85□□□□□ -0.99
GPNMB-208ENST00000470994 TMEM2Q9UHN6 1383 aa8.85□□□□□ -0.99
GPNMB-208ENST00000470994 RAD21O60216 631 aa8.84□□□□□ -0.99
GPNMB-208ENST00000470994 IREB2P48200 963 aaKnown RBP8.84□□□□□ -0.99
GPNMB-208ENST00000470994 IGF2-ASQ6U949 168 aa8.84□□□□□ -0.99
GPNMB-208ENST00000470994 SLC51AQ86UW1 340 aa8.84□□□□□ -0.99
GPNMB-208ENST00000470994 SIX5Q8N196 739 aa8.84□□□□□ -0.99
GPNMB-208ENST00000470994 TSEN2Q8NCE0 465 aaKnown RBP8.84□□□□□ -0.99
GPNMB-208ENST00000470994 NGLY1Q96IV0 654 aa8.84□□□□□ -0.99
GPNMB-208ENST00000470994 ERBINQ96RT1 1412 aa8.84□□□□□ -0.99
GPNMB-208ENST00000470994 SLC52A1Q9NWF4 448 aa8.84□□□□□ -0.99
GPNMB-208ENST00000470994 LRRC7Q96NW7 1537 aa8.84□□□□□ -0.99
GPNMB-208ENST00000470994 ARHGAP31Q2M1Z3 1444 aa8.83□□□□□ -1
GPNMB-208ENST00000470994 TGFBR3LH3BV60 316 aa8.83□□□□□ -1
GPNMB-208ENST00000470994 ARID4AP29374 1257 aaPredicted RBP8.83□□□□□ -1
GPNMB-208ENST00000470994 RTN1Q16799 776 aa8.83□□□□□ -1
GPNMB-208ENST00000470994 MCTP1Q6DN14 999 aa8.83□□□□□ -1
GPNMB-208ENST00000470994 C14orf37Q86TY3 774 aa8.83□□□□□ -1
GPNMB-208ENST00000470994 C2orf49Q9BVC5 232 aaPredicted RBP8.83□□□□□ -1
GPNMB-208ENST00000470994 TMEM94Q12767 1356 aa8.83□□□□□ -1
GPNMB-208ENST00000470994 VWDEQ8N2E2 1590 aa8.82□□□□□ -1
GPNMB-208ENST00000470994 MAST1Q9Y2H9 1570 aa8.82□□□□□ -1
GPNMB-208ENST00000470994 MAP3K6O95382 1288 aa8.82□□□□□ -1
GPNMB-208ENST00000470994 CPB1P15086 417 aa8.82□□□□□ -1
GPNMB-208ENST00000470994 ELMSAN1Q6PJG2 1045 aa8.82□□□□□ -1
GPNMB-208ENST00000470994 ZNF594Q96JF6 807 aaPredicted RBP8.82□□□□□ -1
GPNMB-208ENST00000470994 PCMTD2Q9NV79 361 aa8.82□□□□□ -1
GPNMB-208ENST00000470994 ATAD2Q6PL18 1390 aa8.82□□□□□ -1
GPNMB-208ENST00000470994 PAX4O43316 350 aa8.81□□□□□ -1
GPNMB-208ENST00000470994 ATP9BO43861 1147 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms