RNA–Protein interactions for RNA: ENST00000466959.1

PDCD11-202, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 500 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-202ENST00000466959 ZNF219Q9P2Y4 722 aaPredicted RBP16.32■□□□□ 0.2
PDCD11-202ENST00000466959 FPGT-TNNI3KV9GXZ4 949 aa16.32■□□□□ 0.2
PDCD11-202ENST00000466959 FGFR2P21802 821 aa16.31■□□□□ 0.2
PDCD11-202ENST00000466959 ATP2B4P23634 1241 aa16.31■□□□□ 0.2
PDCD11-202ENST00000466959 MPNDQ8N594 471 aa16.31■□□□□ 0.2
PDCD11-202ENST00000466959 LPIN2Q92539 896 aa16.31■□□□□ 0.2
PDCD11-202ENST00000466959 LNPKQ9C0E8 428 aa16.31■□□□□ 0.2
PDCD11-202ENST00000466959 GGA1Q9UJY5 639 aa16.31■□□□□ 0.2
PDCD11-202ENST00000466959 NSFL1CQ9UNZ2 370 aaKnown RBP16.31■□□□□ 0.2
PDCD11-202ENST00000466959 LEMD3Q9Y2U8 911 aa16.31■□□□□ 0.2
PDCD11-202ENST00000466959 WDR90Q96KV7 1748 aa16.31■□□□□ 0.2
PDCD11-202ENST00000466959 ZNF804BA4D1E1 1349 aa16.3■□□□□ 0.2
PDCD11-202ENST00000466959 A0A1B0GUL7 405 aa16.3■□□□□ 0.2
PDCD11-202ENST00000466959 SLC5A1P13866 664 aa16.3■□□□□ 0.2
PDCD11-202ENST00000466959 KCNJ4P48050 445 aa16.3■□□□□ 0.2
PDCD11-202ENST00000466959 DPP8Q6V1X1 898 aaPredicted RBP16.3■□□□□ 0.2
PDCD11-202ENST00000466959 AACSQ86V21 672 aa16.3■□□□□ 0.2
PDCD11-202ENST00000466959 RTKN2Q8IZC4 609 aa16.3■□□□□ 0.2
PDCD11-202ENST00000466959 EAF2Q96CJ1 260 aaPredicted RBP16.3■□□□□ 0.2
PDCD11-202ENST00000466959 SNAP23O00161 211 aa16.29■□□□□ 0.2
PDCD11-202ENST00000466959 UFL1O94874 794 aa16.29■□□□□ 0.2
PDCD11-202ENST00000466959 C9orf131Q5VYM1 1079 aa16.29■□□□□ 0.2
PDCD11-202ENST00000466959 TBC1D16Q8TBP0 767 aa16.29■□□□□ 0.2
PDCD11-202ENST00000466959 IFIT2P09913 472 aaKnown RBP16.28■□□□□ 0.2
PDCD11-202ENST00000466959 IFIT1P09914 478 aaKnown RBP16.28■□□□□ 0.2
PDCD11-202ENST00000466959 TIMM10P62072 90 aa16.28■□□□□ 0.2
PDCD11-202ENST00000466959 HTRA3P83110 453 aa16.28■□□□□ 0.2
PDCD11-202ENST00000466959 NEUROD6Q96NK8 337 aa16.28■□□□□ 0.2
PDCD11-202ENST00000466959 RTFDC1Q9BY42 306 aaPredicted RBP16.28■□□□□ 0.2
PDCD11-202ENST00000466959 CCDC8Q9H0W5 538 aaPredicted RBP16.28■□□□□ 0.2
PDCD11-202ENST00000466959 BCL11AQ9H165 835 aa16.28■□□□□ 0.2
PDCD11-202ENST00000466959 POLLQ9UGP5 575 aa16.28■□□□□ 0.2
PDCD11-202ENST00000466959 MED23Q9ULK4 1368 aa16.27■□□□□ 0.2
PDCD11-202ENST00000466959 IRS2Q9Y4H2 1338 aa16.27■□□□□ 0.2
PDCD11-202ENST00000466959 WTIPA6NIX2 430 aaPredicted RBP16.27■□□□□ 0.2
PDCD11-202ENST00000466959 C6orf229H3BNL8 230 aa16.27■□□□□ 0.2
PDCD11-202ENST00000466959 C15orf52Q6ZUT6 534 aaKnown RBP16.27■□□□□ 0.2
PDCD11-202ENST00000466959 SUPT20HQ8NEM7 779 aa16.27■□□□□ 0.2
PDCD11-202ENST00000466959 XAGE2Q96GT9 111 aa16.27■□□□□ 0.2
PDCD11-202ENST00000466959 PSMD1Q99460 953 aa16.27■□□□□ 0.2
PDCD11-202ENST00000466959 DBNDD2Q9BQY9 259 aa16.27■□□□□ 0.2
PDCD11-202ENST00000466959 TLR7Q9NYK1 1049 aaKnown RBP16.27■□□□□ 0.2
PDCD11-202ENST00000466959 DBNLQ9UJU6 430 aaKnown RBP16.27■□□□□ 0.2
PDCD11-202ENST00000466959 SALL3Q9BXA9 1300 aa16.26■□□□□ 0.19
PDCD11-202ENST00000466959 MYH13Q9UKX3 1938 aa16.26■□□□□ 0.19
PDCD11-202ENST00000466959 PDE4AP27815 886 aa16.26■□□□□ 0.19
PDCD11-202ENST00000466959 ADORA1P30542 326 aa16.26■□□□□ 0.19
PDCD11-202ENST00000466959 FKBP4Q02790 459 aaKnown RBP eCLIP16.26■□□□□ 0.19
PDCD11-202ENST00000466959 SMC1BQ8NDV3 1235 aa16.26■□□□□ 0.19
PDCD11-202ENST00000466959 EYA3Q99504 573 aa16.26■□□□□ 0.19
PDCD11-202ENST00000466959 OTUD7AQ8TE49 926 aaPredicted RBP16.25■□□□□ 0.19
PDCD11-202ENST00000466959 GPR101Q96P66 508 aaPredicted RBP16.25■□□□□ 0.19
PDCD11-202ENST00000466959 LTBP3Q9NS15 1303 aa16.24■□□□□ 0.19
PDCD11-202ENST00000466959 MX1P20591 662 aa16.24■□□□□ 0.19
PDCD11-202ENST00000466959 KLRK1P26718 216 aa16.24■□□□□ 0.19
PDCD11-202ENST00000466959 GORABQ5T7V8 394 aa16.24■□□□□ 0.19
PDCD11-202ENST00000466959 GPATCH3Q96I76 525 aa16.24■□□□□ 0.19
PDCD11-202ENST00000466959 RNF181Q9P0P0 153 aa16.24■□□□□ 0.19
PDCD11-202ENST00000466959 CCDC88AQ3V6T2 1871 aa16.23■□□□□ 0.19
PDCD11-202ENST00000466959 NFKBIEO00221 500 aa16.23■□□□□ 0.19
PDCD11-202ENST00000466959 WASHC4Q2M389 1173 aa16.23■□□□□ 0.19
PDCD11-202ENST00000466959 CAVIN4Q5BKX8 364 aa16.23■□□□□ 0.19
PDCD11-202ENST00000466959 FBXO33Q7Z6M2 555 aa16.23■□□□□ 0.19
PDCD11-202ENST00000466959 TXNRD3Q86VQ6 643 aa16.23■□□□□ 0.19
PDCD11-202ENST00000466959 PLEKHM2Q8IWE5 1019 aa16.23■□□□□ 0.19
PDCD11-202ENST00000466959 FAM84BQ96KN1 310 aaPredicted RBP16.23■□□□□ 0.19
PDCD11-202ENST00000466959 ZC3H12CQ9C0D7 883 aaKnown RBP16.23■□□□□ 0.19
PDCD11-202ENST00000466959 VPS33BQ9H267 617 aa16.23■□□□□ 0.19
PDCD11-202ENST00000466959 TAOK3Q9H2K8 898 aa16.23■□□□□ 0.19
PDCD11-202ENST00000466959 STAP2Q9UGK3 403 aa16.23■□□□□ 0.19
PDCD11-202ENST00000466959 AOX1Q06278 1338 aa16.22■□□□□ 0.19
PDCD11-202ENST00000466959 TTC41PQ6P2S7 1318 aa16.22■□□□□ 0.19
PDCD11-202ENST00000466959 AKAP11Q9UKA4 1901 aa16.22■□□□□ 0.19
PDCD11-202ENST00000466959 HIBADHP31937 336 aaKnown RBP16.22■□□□□ 0.19
PDCD11-202ENST00000466959 PHKA1P46020 1223 aa16.22■□□□□ 0.19
PDCD11-202ENST00000466959 GYG1P46976 350 aa16.22■□□□□ 0.19
PDCD11-202ENST00000466959 PDE1AP54750 535 aa16.22■□□□□ 0.19
PDCD11-202ENST00000466959 CCDC158Q5M9N0 1113 aa16.22■□□□□ 0.19
PDCD11-202ENST00000466959 CCDC102BQ68D86 513 aa16.22■□□□□ 0.19
PDCD11-202ENST00000466959 ZNF804AQ7Z570 1209 aa16.22■□□□□ 0.19
PDCD11-202ENST00000466959 ECHDC1Q9NTX5 307 aa16.22■□□□□ 0.19
PDCD11-202ENST00000466959 SBF1O95248 1867 aa16.21■□□□□ 0.19
PDCD11-202ENST00000466959 RIMBP2O15034 1052 aa16.21■□□□□ 0.19
PDCD11-202ENST00000466959 UQCRFS1P1P0C7P4 283 aa16.21■□□□□ 0.19
PDCD11-202ENST00000466959 BCAMP50895 628 aa16.21■□□□□ 0.19
PDCD11-202ENST00000466959 KIAA2012Q0VF49 1180 aa16.21■□□□□ 0.19
PDCD11-202ENST00000466959 TTC39AQ5SRH9 613 aa16.21■□□□□ 0.19
PDCD11-202ENST00000466959 SKAP1Q86WV1 359 aa16.21■□□□□ 0.19
PDCD11-202ENST00000466959 VPS37DQ86XT2 251 aa16.21■□□□□ 0.19
PDCD11-202ENST00000466959 ZNF512BQ96KM6 892 aaPredicted RBP16.21■□□□□ 0.19
PDCD11-202ENST00000466959 OSBPL3Q9H4L5 887 aa16.21■□□□□ 0.19
PDCD11-202ENST00000466959 RRAGCQ9HB90 399 aa16.21■□□□□ 0.19
PDCD11-202ENST00000466959 DICER1Q9UPY3 1922 aaKnown RBP16.21■□□□□ 0.19
PDCD11-202ENST00000466959 ZBTB22O15209 634 aa16.2■□□□□ 0.18
PDCD11-202ENST00000466959 PPIP5K2O43314 1243 aa16.2■□□□□ 0.18
PDCD11-202ENST00000466959 ATP5JP18859 108 aa16.2■□□□□ 0.18
PDCD11-202ENST00000466959 ARID4AP29374 1257 aaPredicted RBP16.2■□□□□ 0.18
PDCD11-202ENST00000466959 RASSF7Q02833 373 aa16.2■□□□□ 0.18
PDCD11-202ENST00000466959 AOC3Q16853 763 aa16.2■□□□□ 0.18
PDCD11-202ENST00000466959 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms