RNA–Protein interactions for RNA: ENST00000456369.5

CHEK2-221, Transcript of checkpoint kinase 2, human

TSL 3

Gene CHEK2, Length 588 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-221	ENST00000456369	NSFL1C	Q9UNZ2	370 aa	Known RBP	12.49	□□□□□ -0.41
CHEK2-221	ENST00000456369	TAF1	P21675	1872 aa		12.48	□□□□□ -0.41
CHEK2-221	ENST00000456369	ANKRD18B	A2A2Z9	1011 aa		12.48	□□□□□ -0.41
CHEK2-221	ENST00000456369	GLTPD2	A6NH11	291 aa		12.48	□□□□□ -0.41
CHEK2-221	ENST00000456369	RLBP1	P12271	317 aa		12.48	□□□□□ -0.41
CHEK2-221	ENST00000456369	KIAA2012	Q0VF49	1180 aa		12.48	□□□□□ -0.41
CHEK2-221	ENST00000456369	AOC3	Q16853	763 aa		12.48	□□□□□ -0.41
CHEK2-221	ENST00000456369	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	12.48	□□□□□ -0.41
CHEK2-221	ENST00000456369	SUPT20H	Q8NEM7	779 aa		12.48	□□□□□ -0.41
CHEK2-221	ENST00000456369	CLUAP1	Q96AJ1	413 aa		12.48	□□□□□ -0.41
CHEK2-221	ENST00000456369	MS4A4A	Q96JQ5	239 aa		12.48	□□□□□ -0.41
CHEK2-221	ENST00000456369	MEIS3	Q99687	375 aa		12.48	□□□□□ -0.41
CHEK2-221	ENST00000456369	RYDEN	Q9NUL5	291 aa	Known RBP	12.48	□□□□□ -0.41
CHEK2-221	ENST00000456369	LTBP1	Q14766	1721 aa		12.48	□□□□□ -0.41
CHEK2-221	ENST00000456369	WTIP	A6NIX2	430 aa	Predicted RBP	12.47	□□□□□ -0.41
CHEK2-221	ENST00000456369	PPIP5K2	O43314	1243 aa		12.47	□□□□□ -0.41
CHEK2-221	ENST00000456369	IGHMBP2	P38935	993 aa	Known RBP	12.47	□□□□□ -0.41
CHEK2-221	ENST00000456369	IRX6	P78412	446 aa	Predicted RBP	12.47	□□□□□ -0.41
CHEK2-221	ENST00000456369	CCDC57	Q2TAC2	916 aa		12.47	□□□□□ -0.41
CHEK2-221	ENST00000456369	LARGE2	Q8N3Y3	721 aa		12.47	□□□□□ -0.41
CHEK2-221	ENST00000456369	TMEM57	Q8N5G2	664 aa		12.47	□□□□□ -0.41
CHEK2-221	ENST00000456369	ZNF526	Q8TF50	670 aa	Predicted RBP	12.47	□□□□□ -0.41
CHEK2-221	ENST00000456369	GPBP1L1	Q9HC44	474 aa	Predicted RBP	12.47	□□□□□ -0.41
CHEK2-221	ENST00000456369	XDH	P47989	1333 aa		12.46	□□□□□ -0.41
CHEK2-221	ENST00000456369	ZNF541	Q9H0D2	1346 aa		12.46	□□□□□ -0.41
CHEK2-221	ENST00000456369	UBTFL1	P0CB47	393 aa	Predicted RBP	12.46	□□□□□ -0.41
CHEK2-221	ENST00000456369	WASHC4	Q2M389	1173 aa		12.46	□□□□□ -0.41
CHEK2-221	ENST00000456369	NMRK2	Q9NPI5	230 aa		12.46	□□□□□ -0.41
CHEK2-221	ENST00000456369	ANKIB1	Q9P2G1	1089 aa		12.46	□□□□□ -0.41
CHEK2-221	ENST00000456369	CHMP3	Q9Y3E7	222 aa		12.46	□□□□□ -0.41
CHEK2-221	ENST00000456369	KDM2B	Q8NHM5	1336 aa		12.45	□□□□□ -0.42
CHEK2-221	ENST00000456369	POTEC	B2RU33	542 aa		12.45	□□□□□ -0.42
CHEK2-221	ENST00000456369	POTEB2	H3BUK9	544 aa		12.45	□□□□□ -0.42
CHEK2-221	ENST00000456369	KIF3C	O14782	793 aa		12.45	□□□□□ -0.42
CHEK2-221	ENST00000456369	DDN	O94850	711 aa	Predicted RBP	12.45	□□□□□ -0.42
CHEK2-221	ENST00000456369	RFX5	P48382	616 aa	Predicted RBP	12.45	□□□□□ -0.42
CHEK2-221	ENST00000456369	DZIP1L	Q8IYY4	767 aa	Known RBP	12.45	□□□□□ -0.42
CHEK2-221	ENST00000456369	JDP2	Q8WYK2	163 aa		12.45	□□□□□ -0.42
CHEK2-221	ENST00000456369	ZNF594	Q96JF6	807 aa	Predicted RBP	12.45	□□□□□ -0.42
CHEK2-221	ENST00000456369	L3MBTL3	Q96JM7	780 aa	Predicted RBP	12.45	□□□□□ -0.42
CHEK2-221	ENST00000456369	GPR101	Q96P66	508 aa	Predicted RBP	12.45	□□□□□ -0.42
CHEK2-221	ENST00000456369	MPHOSPH8	Q99549	860 aa		12.45	□□□□□ -0.42
CHEK2-221	ENST00000456369	GGA1	Q9UJY5	639 aa		12.45	□□□□□ -0.42
CHEK2-221	ENST00000456369	ZNRF3	Q9ULT6	936 aa		12.45	□□□□□ -0.42
CHEK2-221	ENST00000456369		G3V3G9	751 aa		12.44	□□□□□ -0.42
CHEK2-221	ENST00000456369	C6orf229	H3BNL8	230 aa		12.44	□□□□□ -0.42
CHEK2-221	ENST00000456369	GTPBP6	O43824	516 aa	Predicted RBP	12.44	□□□□□ -0.42
CHEK2-221	ENST00000456369	UFL1	O94874	794 aa		12.44	□□□□□ -0.42
CHEK2-221	ENST00000456369	GNAI3	P08754	354 aa		12.44	□□□□□ -0.42
CHEK2-221	ENST00000456369	ATP2B4	P23634	1241 aa		12.44	□□□□□ -0.42
CHEK2-221	ENST00000456369	CHRND	Q07001	517 aa		12.44	□□□□□ -0.42
CHEK2-221	ENST00000456369	LHX8	Q68G74	356 aa		12.44	□□□□□ -0.42
CHEK2-221	ENST00000456369	LDHAL6A	Q6ZMR3	332 aa		12.44	□□□□□ -0.42
CHEK2-221	ENST00000456369	RIPOR2	Q9Y4F9	1068 aa		12.44	□□□□□ -0.42
CHEK2-221	ENST00000456369	LRRFIP2	Q9Y608	721 aa	Known RBP	12.44	□□□□□ -0.42
CHEK2-221	ENST00000456369	IRS2	Q9Y4H2	1338 aa		12.43	□□□□□ -0.42
CHEK2-221	ENST00000456369	TIAM2	Q8IVF5	1701 aa		12.43	□□□□□ -0.42
CHEK2-221	ENST00000456369	MYH3	P11055	1940 aa		12.43	□□□□□ -0.42
CHEK2-221	ENST00000456369	YDJC	A8MPS7	323 aa		12.43	□□□□□ -0.42
CHEK2-221	ENST00000456369	ZBTB7B	O15156	539 aa	Predicted RBP	12.43	□□□□□ -0.42
CHEK2-221	ENST00000456369	MTX1	Q13505	466 aa		12.43	□□□□□ -0.42
CHEK2-221	ENST00000456369	FTSJ3	Q8IY81	847 aa	Known RBP	12.43	□□□□□ -0.42
CHEK2-221	ENST00000456369	NIM1K	Q8IY84	436 aa		12.43	□□□□□ -0.42
CHEK2-221	ENST00000456369	GPC2	Q8N158	579 aa		12.43	□□□□□ -0.42
CHEK2-221	ENST00000456369	SPRYD3	Q8NCJ5	442 aa		12.43	□□□□□ -0.42
CHEK2-221	ENST00000456369	EYA3	Q99504	573 aa		12.43	□□□□□ -0.42
CHEK2-221	ENST00000456369	PUS3	Q9BZE2	481 aa	Known RBP	12.43	□□□□□ -0.42
CHEK2-221	ENST00000456369	ANKRD2	Q9GZV1	360 aa		12.43	□□□□□ -0.42
CHEK2-221	ENST00000456369	HDAC5	Q9UQL6	1122 aa		12.43	□□□□□ -0.42
CHEK2-221	ENST00000456369	LEMD3	Q9Y2U8	911 aa		12.43	□□□□□ -0.42
CHEK2-221	ENST00000456369	RIMBP2	O15034	1052 aa		12.42	□□□□□ -0.42
CHEK2-221	ENST00000456369	PLIN1	O60240	522 aa		12.42	□□□□□ -0.42
CHEK2-221	ENST00000456369	PTPN12	Q05209	780 aa	Known RBP	12.42	□□□□□ -0.42
CHEK2-221	ENST00000456369	CXCL9	Q07325	125 aa		12.42	□□□□□ -0.42
CHEK2-221	ENST00000456369	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	12.42	□□□□□ -0.42
CHEK2-221	ENST00000456369	TXNRD3	Q86VQ6	643 aa		12.42	□□□□□ -0.42
CHEK2-221	ENST00000456369	KLHDC4	Q8TBB5	520 aa		12.42	□□□□□ -0.42
CHEK2-221	ENST00000456369	PANK1	Q8TE04	598 aa		12.42	□□□□□ -0.42
CHEK2-221	ENST00000456369	ZC3H12C	Q9C0D7	883 aa	Known RBP	12.42	□□□□□ -0.42
CHEK2-221	ENST00000456369	RRAGC	Q9HB90	399 aa		12.42	□□□□□ -0.42
CHEK2-221	ENST00000456369	MED23	Q9ULK4	1368 aa		12.42	□□□□□ -0.42
CHEK2-221	ENST00000456369	ZNF804B	A4D1E1	1349 aa		12.41	□□□□□ -0.42
CHEK2-221	ENST00000456369	DICER1	Q9UPY3	1922 aa	Known RBP	12.41	□□□□□ -0.42
CHEK2-221	ENST00000456369	SNAP23	O00161	211 aa		12.41	□□□□□ -0.42
CHEK2-221	ENST00000456369	TAF5L	O75529	589 aa		12.41	□□□□□ -0.42
CHEK2-221	ENST00000456369	GNAI2	P04899	355 aa		12.41	□□□□□ -0.42
CHEK2-221	ENST00000456369	VEGFA	P15692	232 aa	Predicted RBP	12.41	□□□□□ -0.42
CHEK2-221	ENST00000456369	KLRK1	P26718	216 aa		12.41	□□□□□ -0.42
CHEK2-221	ENST00000456369	EIF6	P56537	245 aa	Known RBP	12.41	□□□□□ -0.42
CHEK2-221	ENST00000456369	DOK7	Q18PE1	504 aa		12.41	□□□□□ -0.42
CHEK2-221	ENST00000456369	LRRC24	Q50LG9	513 aa		12.41	□□□□□ -0.42
CHEK2-221	ENST00000456369	TAF7L	Q5H9L4	462 aa		12.41	□□□□□ -0.42
CHEK2-221	ENST00000456369	C15orf52	Q6ZUT6	534 aa	Known RBP	12.41	□□□□□ -0.42
CHEK2-221	ENST00000456369	ITPRIP	Q8IWB1	547 aa		12.41	□□□□□ -0.42
CHEK2-221	ENST00000456369	VGLL2	Q8N8G2	317 aa		12.41	□□□□□ -0.42
CHEK2-221	ENST00000456369	HELB	Q8NG08	1087 aa	Predicted RBP	12.41	□□□□□ -0.42
CHEK2-221	ENST00000456369	DBNDD1	Q9H9R9	158 aa		12.41	□□□□□ -0.42
CHEK2-221	ENST00000456369	PPP1R37	O75864	691 aa		12.4	□□□□□ -0.42
CHEK2-221	ENST00000456369	ATG9A	Q7Z3C6	839 aa		12.4	□□□□□ -0.42
CHEK2-221	ENST00000456369	KCNQ5	Q9NR82	932 aa		12.4	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms