RNA–Protein interactions for RNA: ENST00000450162.6

SNRNP27-203, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 2

Gene SNRNP27, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-203ENST00000450162 PDE8BO95263 885 aa16.25■□□□□ 0.19
SNRNP27-203ENST00000450162 RPS12P25398 132 aaKnown RBP16.25■□□□□ 0.19
SNRNP27-203ENST00000450162 IL15P40933 162 aaPredicted RBP16.25■□□□□ 0.19
SNRNP27-203ENST00000450162 LRRC24Q50LG9 513 aa16.25■□□□□ 0.19
SNRNP27-203ENST00000450162 PNMA8AQ86V59 439 aaPredicted RBP16.25■□□□□ 0.19
SNRNP27-203ENST00000450162 DPF2Q92785 391 aa16.25■□□□□ 0.19
SNRNP27-203ENST00000450162 GPR101Q96P66 508 aaPredicted RBP16.25■□□□□ 0.19
SNRNP27-203ENST00000450162 RAD17O75943 681 aa16.24■□□□□ 0.19
SNRNP27-203ENST00000450162 ATP8B2P98198 1209 aa16.24■□□□□ 0.19
SNRNP27-203ENST00000450162 ZNF804AQ7Z570 1209 aa16.24■□□□□ 0.19
SNRNP27-203ENST00000450162 KLHDC4Q8TBB5 520 aa16.24■□□□□ 0.19
SNRNP27-203ENST00000450162 RBM46Q8TBY0 533 aaKnown RBP16.24■□□□□ 0.19
SNRNP27-203ENST00000450162 CEP126Q9P2H0 1117 aa16.24■□□□□ 0.19
SNRNP27-203ENST00000450162 USP17L3A6NCW0 530 aa16.23■□□□□ 0.19
SNRNP27-203ENST00000450162 USP17L4A6NCW7 530 aa16.23■□□□□ 0.19
SNRNP27-203ENST00000450162 WTIPA6NIX2 430 aaPredicted RBP16.23■□□□□ 0.19
SNRNP27-203ENST00000450162 VIL1P09327 827 aaKnown RBP16.23■□□□□ 0.19
SNRNP27-203ENST00000450162 MMP14P50281 582 aa16.23■□□□□ 0.19
SNRNP27-203ENST00000450162 USP17L1Q7RTZ2 530 aa16.23■□□□□ 0.19
SNRNP27-203ENST00000450162 ATG9AQ7Z3C6 839 aa16.23■□□□□ 0.19
SNRNP27-203ENST00000450162 VGLL2Q8N8G2 317 aa16.23■□□□□ 0.19
SNRNP27-203ENST00000450162 TAF1DQ9H5J8 278 aaPredicted RBP16.23■□□□□ 0.19
SNRNP27-203ENST00000450162 COG6Q9Y2V7 657 aa16.23■□□□□ 0.19
SNRNP27-203ENST00000450162 U3KPZ7 1027 aaPredicted RBP16.23■□□□□ 0.19
SNRNP27-203ENST00000450162 IRS2Q9Y4H2 1338 aa16.22■□□□□ 0.19
SNRNP27-203ENST00000450162 SPEF2Q9C093 1822 aa16.22■□□□□ 0.19
SNRNP27-203ENST00000450162 PSMD14O00487 310 aa16.22■□□□□ 0.19
SNRNP27-203ENST00000450162 IFIT1P09914 478 aaKnown RBP16.22■□□□□ 0.19
SNRNP27-203ENST00000450162 SCNN1DP51172 638 aa16.22■□□□□ 0.19
SNRNP27-203ENST00000450162 PUM3Q15397 648 aaKnown RBP16.22■□□□□ 0.19
SNRNP27-203ENST00000450162 STRIP1Q5VSL9 837 aa16.22■□□□□ 0.19
SNRNP27-203ENST00000450162 TXNRD3Q86VQ6 643 aa16.22■□□□□ 0.19
SNRNP27-203ENST00000450162 AGBL3Q8NEM8 1001 aa16.22■□□□□ 0.19
SNRNP27-203ENST00000450162 SSH3Q8TE77 659 aa16.22■□□□□ 0.19
SNRNP27-203ENST00000450162 CD209Q9NNX6 404 aa16.22■□□□□ 0.19
SNRNP27-203ENST00000450162 GPRC5DQ9NZD1 345 aa16.22■□□□□ 0.19
SNRNP27-203ENST00000450162 SCN4AP35499 1836 aa16.22■□□□□ 0.19
SNRNP27-203ENST00000450162 EPHX2P34913 555 aa16.21■□□□□ 0.19
SNRNP27-203ENST00000450162 GMPSP49915 693 aaPredicted RBP16.21■□□□□ 0.19
SNRNP27-203ENST00000450162 C1QTNF8P60827 252 aa16.21■□□□□ 0.19
SNRNP27-203ENST00000450162 FSTL1Q12841 308 aa16.21■□□□□ 0.19
SNRNP27-203ENST00000450162 POLA2Q14181 598 aa16.21■□□□□ 0.19
SNRNP27-203ENST00000450162 CAVIN4Q5BKX8 364 aa16.21■□□□□ 0.19
SNRNP27-203ENST00000450162 RPAP2Q8IXW5 612 aaPredicted RBP16.21■□□□□ 0.19
SNRNP27-203ENST00000450162 LPIN2Q92539 896 aa16.21■□□□□ 0.19
SNRNP27-203ENST00000450162 SIL1Q9H173 461 aa16.21■□□□□ 0.19
SNRNP27-203ENST00000450162 ZBTB40Q9NUA8 1239 aa16.21■□□□□ 0.19
SNRNP27-203ENST00000450162 MYO3BQ8WXR4 1341 aa16.2■□□□□ 0.18
SNRNP27-203ENST00000450162 ZNF609O15014 1411 aa16.2■□□□□ 0.18
SNRNP27-203ENST00000450162 PNMA6EA0A0J9YXQ4 647 aa16.2■□□□□ 0.18
SNRNP27-203ENST00000450162 H7C1D1 291 aa16.2■□□□□ 0.18
SNRNP27-203ENST00000450162 SNAP23O00161 211 aa16.2■□□□□ 0.18
SNRNP27-203ENST00000450162 IL1R1P14778 569 aa16.2■□□□□ 0.18
SNRNP27-203ENST00000450162 HIBADHP31937 336 aaKnown RBP16.2■□□□□ 0.18
SNRNP27-203ENST00000450162 G3BP1Q13283 466 aaKnown RBP eCLIP16.2■□□□□ 0.18
SNRNP27-203ENST00000450162 RSBN1LQ6PCB5 846 aaPredicted RBP16.2■□□□□ 0.18
SNRNP27-203ENST00000450162 USP50Q70EL3 339 aaPredicted RBP16.2■□□□□ 0.18
SNRNP27-203ENST00000450162 SMC1BQ8NDV3 1235 aa16.2■□□□□ 0.18
SNRNP27-203ENST00000450162 KCNQ5Q9NR82 932 aa16.2■□□□□ 0.18
SNRNP27-203ENST00000450162 PA2G4Q9UQ80 394 aaKnown RBP16.2■□□□□ 0.18
SNRNP27-203ENST00000450162 AKAP2Q9Y2D5 859 aa16.2■□□□□ 0.18
SNRNP27-203ENST00000450162 SASH1O94885 1247 aa16.19■□□□□ 0.18
SNRNP27-203ENST00000450162 SLC5A1P13866 664 aa16.19■□□□□ 0.18
SNRNP27-203ENST00000450162 FGFR2P21802 821 aa16.19■□□□□ 0.18
SNRNP27-203ENST00000450162 KLRK1P26718 216 aa16.19■□□□□ 0.18
SNRNP27-203ENST00000450162 RRP1P56182 461 aaKnown RBP16.19■□□□□ 0.18
SNRNP27-203ENST00000450162 TTLL5Q6EMB2 1281 aa16.19■□□□□ 0.18
SNRNP27-203ENST00000450162 LDHDQ86WU2 507 aa16.19■□□□□ 0.18
SNRNP27-203ENST00000450162 VPS37DQ86XT2 251 aa16.19■□□□□ 0.18
SNRNP27-203ENST00000450162 FAM84BQ96KN1 310 aaPredicted RBP16.19■□□□□ 0.18
SNRNP27-203ENST00000450162 ADARB2Q9NS39 739 aaKnown RBP16.19■□□□□ 0.18
SNRNP27-203ENST00000450162 CNOT7Q9UIV1 285 aaKnown RBP16.19■□□□□ 0.18
SNRNP27-203ENST00000450162 HMMRO75330 724 aa16.18■□□□□ 0.18
SNRNP27-203ENST00000450162 EPS15P42566 896 aa16.18■□□□□ 0.18
SNRNP27-203ENST00000450162 CEP85Q6P2H3 762 aa16.18■□□□□ 0.18
SNRNP27-203ENST00000450162 FBXO33Q7Z6M2 555 aa16.18■□□□□ 0.18
SNRNP27-203ENST00000450162 FKBP1AP62942 108 aaKnown RBP16.17■□□□□ 0.18
SNRNP27-203ENST00000450162 ATP2B3Q16720 1220 aa16.17■□□□□ 0.18
SNRNP27-203ENST00000450162 DACT2Q5SW24 774 aa16.17■□□□□ 0.18
SNRNP27-203ENST00000450162 C20orf194Q5TEA3 1177 aa16.17■□□□□ 0.18
SNRNP27-203ENST00000450162 TDRD7Q8NHU6 1098 aaKnown RBP16.17■□□□□ 0.18
SNRNP27-203ENST00000450162 C1orf115Q9H7X2 142 aa16.17■□□□□ 0.18
SNRNP27-203ENST00000450162 NOP58Q9Y2X3 529 aaKnown RBP16.17■□□□□ 0.18
SNRNP27-203ENST00000450162 ZBTB12Q9Y330 459 aaPredicted RBP16.17■□□□□ 0.18
SNRNP27-203ENST00000450162 ZBTB22O15209 634 aa16.16■□□□□ 0.18
SNRNP27-203ENST00000450162 GYG1P46976 350 aa16.16■□□□□ 0.18
SNRNP27-203ENST00000450162 GTF2IP78347 998 aa16.16■□□□□ 0.18
SNRNP27-203ENST00000450162 EAPPQ56P03 285 aaPredicted RBP16.16■□□□□ 0.18
SNRNP27-203ENST00000450162 HSP90AB4PQ58FF6 505 aa16.16■□□□□ 0.18
SNRNP27-203ENST00000450162 CHADLQ6NUI6 762 aa16.16■□□□□ 0.18
SNRNP27-203ENST00000450162 MICALL2Q8IY33 904 aa16.16■□□□□ 0.18
SNRNP27-203ENST00000450162 OGFOD1Q8N543 542 aa16.16■□□□□ 0.18
SNRNP27-203ENST00000450162 ZC3H15Q8WU90 426 aaKnown RBP16.16■□□□□ 0.18
SNRNP27-203ENST00000450162 GMLQ99445 158 aa16.16■□□□□ 0.18
SNRNP27-203ENST00000450162 FAM205AQ6ZU69 1335 aa16.16■□□□□ 0.18
SNRNP27-203ENST00000450162 SURF6O75683 361 aaKnown RBP16.15■□□□□ 0.18
SNRNP27-203ENST00000450162 USP17L8P0C7I0 530 aa16.15■□□□□ 0.18
SNRNP27-203ENST00000450162 GPR108Q9NPR9 543 aa16.15■□□□□ 0.18
SNRNP27-203ENST00000450162 GNL3LQ9NVN8 582 aaKnown RBP16.15■□□□□ 0.18
SNRNP27-203ENST00000450162 A0A1B0GUL6 1792 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms