RNA–Protein interactions for RNA: ENST00000428892.1

APOBEC3C-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3C, humanhuman

TSL 3

Gene APOBEC3C, Length 1,056 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3C-202ENST00000428892 RPS8P62241 208 aaKnown RBP13.89□□□□□ -0.19
APOBEC3C-202ENST00000428892 GOLGA2Q08379 1002 aa13.89□□□□□ -0.19
APOBEC3C-202ENST00000428892 ANGEL2Q5VTE6 544 aaKnown RBP13.89□□□□□ -0.19
APOBEC3C-202ENST00000428892 CCDC30Q5VVM6 783 aa13.89□□□□□ -0.19
APOBEC3C-202ENST00000428892 RIC3Q7Z5B4 369 aa13.89□□□□□ -0.19
APOBEC3C-202ENST00000428892 CHMP4AQ9BY43 222 aa13.89□□□□□ -0.19
APOBEC3C-202ENST00000428892 MYH16Q9H6N6 1097 aa13.89□□□□□ -0.19
APOBEC3C-202ENST00000428892 PHAXQ9H814 394 aaKnown RBP13.89□□□□□ -0.19
APOBEC3C-202ENST00000428892 KCNQ5Q9NR82 932 aa13.89□□□□□ -0.19
APOBEC3C-202ENST00000428892 GGA1Q9UJY5 639 aa13.89□□□□□ -0.19
APOBEC3C-202ENST00000428892 SSUH2Q9Y2M2 353 aa13.89□□□□□ -0.19
APOBEC3C-202ENST00000428892 VAMP4O75379 141 aa13.88□□□□□ -0.19
APOBEC3C-202ENST00000428892 EXOSC9Q06265 439 aaKnown RBP13.88□□□□□ -0.19
APOBEC3C-202ENST00000428892 TTLL12Q14166 644 aaPredicted RBP13.88□□□□□ -0.19
APOBEC3C-202ENST00000428892 BBXQ8WY36 941 aaPredicted RBP13.88□□□□□ -0.19
APOBEC3C-202ENST00000428892 ISCA1Q9BUE6 129 aa13.88□□□□□ -0.19
APOBEC3C-202ENST00000428892 TNRC18O15417 2968 aaPredicted RBP13.87□□□□□ -0.19
APOBEC3C-202ENST00000428892 VIL1P09327 827 aaKnown RBP13.87□□□□□ -0.19
APOBEC3C-202ENST00000428892 FKBP1BP68106 108 aa13.87□□□□□ -0.19
APOBEC3C-202ENST00000428892 SCARF1Q14162 830 aa13.87□□□□□ -0.19
APOBEC3C-202ENST00000428892 CCDC152Q4G0S7 254 aa13.87□□□□□ -0.19
APOBEC3C-202ENST00000428892 RSBN1LQ6PCB5 846 aaPredicted RBP13.87□□□□□ -0.19
APOBEC3C-202ENST00000428892 RASAL3Q86YV0 1011 aa13.87□□□□□ -0.19
APOBEC3C-202ENST00000428892 AGBL3Q8NEM8 1001 aa13.87□□□□□ -0.19
APOBEC3C-202ENST00000428892 CSRNP1Q96S65 589 aa13.87□□□□□ -0.19
APOBEC3C-202ENST00000428892 ECM2O94769 699 aaPredicted RBP13.86□□□□□ -0.19
APOBEC3C-202ENST00000428892 NF2P35240 595 aa13.86□□□□□ -0.19
APOBEC3C-202ENST00000428892 ZBTB38Q8NAP3 1195 aaPredicted RBP13.86□□□□□ -0.19
APOBEC3C-202ENST00000428892 FBXW7Q969H0 707 aa13.86□□□□□ -0.19
APOBEC3C-202ENST00000428892 MYOZ2Q9NPC6 264 aa13.86□□□□□ -0.19
APOBEC3C-202ENST00000428892 PODXL2Q9NZ53 605 aa13.86□□□□□ -0.19
APOBEC3C-202ENST00000428892 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.86□□□□□ -0.19
APOBEC3C-202ENST00000428892 ASTN2O75129 1339 aaPredicted RBP13.86□□□□□ -0.19
APOBEC3C-202ENST00000428892 USP17L8P0C7I0 530 aa13.85□□□□□ -0.19
APOBEC3C-202ENST00000428892 SLFN5Q08AF3 891 aa13.85□□□□□ -0.19
APOBEC3C-202ENST00000428892 TRIM28Q13263 835 aaKnown RBP13.85□□□□□ -0.19
APOBEC3C-202ENST00000428892 TRMT2AQ8IZ69 625 aaKnown RBP13.85□□□□□ -0.19
APOBEC3C-202ENST00000428892 CCDC85AQ96PX6 553 aaPredicted RBP13.85□□□□□ -0.19
APOBEC3C-202ENST00000428892 SEC31BQ9NQW1 1179 aa13.85□□□□□ -0.19
APOBEC3C-202ENST00000428892 XDHP47989 1333 aa13.85□□□□□ -0.19
APOBEC3C-202ENST00000428892 PITPNM2Q9BZ72 1349 aa13.85□□□□□ -0.19
APOBEC3C-202ENST00000428892 ZNF609O15014 1411 aa13.84□□□□□ -0.19
APOBEC3C-202ENST00000428892 E9PSI1 815 aa13.84□□□□□ -0.19
APOBEC3C-202ENST00000428892 PDE8AO60658 829 aa13.84□□□□□ -0.19
APOBEC3C-202ENST00000428892 CENPBP07199 599 aaPredicted RBP13.84□□□□□ -0.19
APOBEC3C-202ENST00000428892 DSG3P32926 999 aa13.84□□□□□ -0.19
APOBEC3C-202ENST00000428892 PKN2Q16513 984 aaKnown RBP13.84□□□□□ -0.19
APOBEC3C-202ENST00000428892 PRPF38BQ5VTL8 546 aaKnown RBP13.84□□□□□ -0.19
APOBEC3C-202ENST00000428892 G2E3Q7L622 706 aa13.84□□□□□ -0.19
APOBEC3C-202ENST00000428892 ANKRD18AQ8IVF6 992 aa13.84□□□□□ -0.19
APOBEC3C-202ENST00000428892 MYD88Q99836 296 aa13.84□□□□□ -0.19
APOBEC3C-202ENST00000428892 HPS5Q9UPZ3 1129 aa13.84□□□□□ -0.19
APOBEC3C-202ENST00000428892 ECM29Q5VYK3 1845 aa13.83□□□□□ -0.2
APOBEC3C-202ENST00000428892 USP17L3A6NCW0 530 aa13.83□□□□□ -0.2
APOBEC3C-202ENST00000428892 USP17L4A6NCW7 530 aa13.83□□□□□ -0.2
APOBEC3C-202ENST00000428892 ZNF280AP59817 542 aaPredicted RBP13.83□□□□□ -0.2
APOBEC3C-202ENST00000428892 USP17L1Q7RTZ2 530 aa13.83□□□□□ -0.2
APOBEC3C-202ENST00000428892 OGFOD1Q8N543 542 aa13.83□□□□□ -0.2
APOBEC3C-202ENST00000428892 CDCA7LQ96GN5 454 aa13.83□□□□□ -0.2
APOBEC3C-202ENST00000428892 STK31Q9BXU1 1019 aa13.83□□□□□ -0.2
APOBEC3C-202ENST00000428892 TBC1D8O95759 1140 aa13.82□□□□□ -0.2
APOBEC3C-202ENST00000428892 DDX58O95786 925 aaKnown RBP13.82□□□□□ -0.2
APOBEC3C-202ENST00000428892 ATP2B4P23634 1241 aa13.82□□□□□ -0.2
APOBEC3C-202ENST00000428892 SREBF2Q12772 1141 aa13.82□□□□□ -0.2
APOBEC3C-202ENST00000428892 PODNQ7Z5L7 613 aa13.82□□□□□ -0.2
APOBEC3C-202ENST00000428892 CCDC191Q8NCU4 936 aa13.82□□□□□ -0.2
APOBEC3C-202ENST00000428892 CDC5LQ99459 802 aaKnown RBP13.82□□□□□ -0.2
APOBEC3C-202ENST00000428892 CWC25Q9NXE8 425 aaPredicted RBP13.82□□□□□ -0.2
APOBEC3C-202ENST00000428892 SCAF8Q9UPN6 1271 aaKnown RBP13.82□□□□□ -0.2
APOBEC3C-202ENST00000428892 ZNF646O15015 1829 aaPredicted RBP13.82□□□□□ -0.2
APOBEC3C-202ENST00000428892 FLIIQ13045 1269 aa13.81□□□□□ -0.2
APOBEC3C-202ENST00000428892 MKRN3Q13064 507 aaKnown RBP13.81□□□□□ -0.2
APOBEC3C-202ENST00000428892 KSR2Q6VAB6 950 aa13.81□□□□□ -0.2
APOBEC3C-202ENST00000428892 MOB2Q70IA6 237 aa13.81□□□□□ -0.2
APOBEC3C-202ENST00000428892 PLCD3Q8N3E9 789 aa13.81□□□□□ -0.2
APOBEC3C-202ENST00000428892 ZNF296Q8WUU4 475 aaPredicted RBP13.81□□□□□ -0.2
APOBEC3C-202ENST00000428892 METTL22Q9BUU2 404 aaPredicted RBP13.81□□□□□ -0.2
APOBEC3C-202ENST00000428892 PI4KAP2A4QPH2 592 aa13.8□□□□□ -0.2
APOBEC3C-202ENST00000428892 UBE2Q2LH0YL09 131 aa13.8□□□□□ -0.2
APOBEC3C-202ENST00000428892 PCCAP05165 728 aaPredicted RBP13.8□□□□□ -0.2
APOBEC3C-202ENST00000428892 PI4KAP1Q8N8J0 262 aa13.8□□□□□ -0.2
APOBEC3C-202ENST00000428892 MAP3K2Q9Y2U5 619 aa13.8□□□□□ -0.2
APOBEC3C-202ENST00000428892 MYO3BQ8WXR4 1341 aa13.8□□□□□ -0.2
APOBEC3C-202ENST00000428892 MED23Q9ULK4 1368 aa13.8□□□□□ -0.2
APOBEC3C-202ENST00000428892 IGKV5-2P06315 115 aa13.79□□□□□ -0.2
APOBEC3C-202ENST00000428892 PRAMEF18Q5VWM3 479 aa13.79□□□□□ -0.2
APOBEC3C-202ENST00000428892 ARMC9Q7Z3E5 817 aa13.79□□□□□ -0.2
APOBEC3C-202ENST00000428892 JARID2Q92833 1246 aaPredicted RBP13.79□□□□□ -0.2
APOBEC3C-202ENST00000428892 PRKG1Q13976 671 aa13.78□□□□□ -0.2
APOBEC3C-202ENST00000428892 NBPF9Q3BBW0 867 aa13.78□□□□□ -0.2
APOBEC3C-202ENST00000428892 GPR25O00155 361 aa13.77□□□□□ -0.21
APOBEC3C-202ENST00000428892 FKTNO75072 461 aa13.77□□□□□ -0.21
APOBEC3C-202ENST00000428892 CTSWP56202 376 aa13.77□□□□□ -0.21
APOBEC3C-202ENST00000428892 NEXNQ0ZGT2 675 aa13.77□□□□□ -0.21
APOBEC3C-202ENST00000428892 FBXO46Q6PJ61 603 aaPredicted RBP13.77□□□□□ -0.21
APOBEC3C-202ENST00000428892 APOBEC3FQ8IUX4 373 aaKnown RBP13.77□□□□□ -0.21
APOBEC3C-202ENST00000428892 YTHDC1Q96MU7 727 aaKnown RBP13.77□□□□□ -0.21
APOBEC3C-202ENST00000428892 GMLQ99445 158 aa13.77□□□□□ -0.21
APOBEC3C-202ENST00000428892 LAMB1P07942 1786 aa13.76□□□□□ -0.21
APOBEC3C-202ENST00000428892 NEURL1BA8MQ27 555 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms