RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 KLRK1P26718 216 aa23.62■■□□□ 1.37
PDLIM7-204ENST00000393546 IL15P40933 162 aaPredicted RBP23.62■■□□□ 1.37
PDLIM7-204ENST00000393546 ATG9AQ7Z3C6 839 aa23.62■■□□□ 1.37
PDLIM7-204ENST00000393546 KCNQ5Q9NR82 932 aa23.62■■□□□ 1.37
PDLIM7-204ENST00000393546 HACL1Q9UJ83 578 aa23.62■■□□□ 1.37
PDLIM7-204ENST00000393546 PNMA6EA0A0J9YXQ4 647 aa23.61■■□□□ 1.37
PDLIM7-204ENST00000393546 LMOD1P29536 600 aaPredicted RBP23.61■■□□□ 1.37
PDLIM7-204ENST00000393546 CEP126Q9P2H0 1117 aa23.61■■□□□ 1.37
PDLIM7-204ENST00000393546 A0A1B0GUL6 1792 aa23.6■■□□□ 1.37
PDLIM7-204ENST00000393546 PSMD14O00487 310 aa23.6■■□□□ 1.37
PDLIM7-204ENST00000393546 RRP1P56182 461 aaKnown RBP23.6■■□□□ 1.37
PDLIM7-204ENST00000393546 ZNF804AQ7Z570 1209 aa23.6■■□□□ 1.37
PDLIM7-204ENST00000393546 VGLL2Q8N8G2 317 aa23.6■■□□□ 1.37
PDLIM7-204ENST00000393546 IRS2Q9Y4H2 1338 aa23.59■■□□□ 1.37
PDLIM7-204ENST00000393546 TOMM70O94826 608 aa23.59■■□□□ 1.37
PDLIM7-204ENST00000393546 ZBTB40Q9NUA8 1239 aa23.59■■□□□ 1.37
PDLIM7-204ENST00000393546 SCN4AP35499 1836 aa23.59■■□□□ 1.37
PDLIM7-204ENST00000393546 USP17L3A6NCW0 530 aa23.58■■□□□ 1.37
PDLIM7-204ENST00000393546 USP17L4A6NCW7 530 aa23.58■■□□□ 1.37
PDLIM7-204ENST00000393546 VIL1P09327 827 aaKnown RBP23.58■■□□□ 1.37
PDLIM7-204ENST00000393546 GMPSP49915 693 aaPredicted RBP23.58■■□□□ 1.37
PDLIM7-204ENST00000393546 G3BP1Q13283 466 aaKnown RBP eCLIP23.58■■□□□ 1.37
PDLIM7-204ENST00000393546 POLA2Q14181 598 aa23.58■■□□□ 1.37
PDLIM7-204ENST00000393546 PUM3Q15397 648 aaKnown RBP23.58■■□□□ 1.37
PDLIM7-204ENST00000393546 USP17L1Q7RTZ2 530 aa23.58■■□□□ 1.37
PDLIM7-204ENST00000393546 SSH3Q8TE77 659 aa23.58■■□□□ 1.37
PDLIM7-204ENST00000393546 TAF1DQ9H5J8 278 aaPredicted RBP23.58■■□□□ 1.37
PDLIM7-204ENST00000393546 CD209Q9NNX6 404 aa23.58■■□□□ 1.37
PDLIM7-204ENST00000393546 IFIT1P09914 478 aaKnown RBP23.57■■□□□ 1.36
PDLIM7-204ENST00000393546 EPHX2P34913 555 aa23.57■■□□□ 1.36
PDLIM7-204ENST00000393546 SCNN1DP51172 638 aa23.57■■□□□ 1.36
PDLIM7-204ENST00000393546 RPS12P25398 132 aaKnown RBP23.56■■□□□ 1.36
PDLIM7-204ENST00000393546 HIBADHP31937 336 aaKnown RBP23.56■■□□□ 1.36
PDLIM7-204ENST00000393546 CEP85Q6P2H3 762 aa23.56■■□□□ 1.36
PDLIM7-204ENST00000393546 DPF2Q92785 391 aa23.56■■□□□ 1.36
PDLIM7-204ENST00000393546 GPRC5DQ9NZD1 345 aa23.56■■□□□ 1.36
PDLIM7-204ENST00000393546 ZBTB12Q9Y330 459 aaPredicted RBP23.56■■□□□ 1.36
PDLIM7-204ENST00000393546 SCN9AQ15858 1988 aa23.55■■□□□ 1.36
PDLIM7-204ENST00000393546 SLC5A1P13866 664 aa23.55■■□□□ 1.36
PDLIM7-204ENST00000393546 FGFR2P21802 821 aa23.55■■□□□ 1.36
PDLIM7-204ENST00000393546 EPS15P42566 896 aa23.55■■□□□ 1.36
PDLIM7-204ENST00000393546 CAVIN4Q5BKX8 364 aa23.55■■□□□ 1.36
PDLIM7-204ENST00000393546 STRIP1Q5VSL9 837 aa23.55■■□□□ 1.36
PDLIM7-204ENST00000393546 PNMA8AQ86V59 439 aaPredicted RBP23.55■■□□□ 1.36
PDLIM7-204ENST00000393546 RBM46Q8TBY0 533 aaKnown RBP23.55■■□□□ 1.36
PDLIM7-204ENST00000393546 LPIN2Q92539 896 aa23.55■■□□□ 1.36
PDLIM7-204ENST00000393546 FBXW7Q969H0 707 aa23.55■■□□□ 1.36
PDLIM7-204ENST00000393546 FAM84BQ96KN1 310 aaPredicted RBP23.55■■□□□ 1.36
PDLIM7-204ENST00000393546 CNOT7Q9UIV1 285 aaKnown RBP23.55■■□□□ 1.36
PDLIM7-204ENST00000393546 IL1R1P14778 569 aa23.54■■□□□ 1.36
PDLIM7-204ENST00000393546 GYG1P46976 350 aa23.54■■□□□ 1.36
PDLIM7-204ENST00000393546 C1QTNF8P60827 252 aa23.54■■□□□ 1.36
PDLIM7-204ENST00000393546 TTLL5Q6EMB2 1281 aa23.54■■□□□ 1.36
PDLIM7-204ENST00000393546 RSBN1LQ6PCB5 846 aaPredicted RBP23.54■■□□□ 1.36
PDLIM7-204ENST00000393546 VPS37DQ86XT2 251 aa23.54■■□□□ 1.36
PDLIM7-204ENST00000393546 RPAP2Q8IXW5 612 aaPredicted RBP23.54■■□□□ 1.36
PDLIM7-204ENST00000393546 H7C1D1 291 aa23.53■■□□□ 1.36
PDLIM7-204ENST00000393546 ATP2B3Q16720 1220 aa23.53■■□□□ 1.36
PDLIM7-204ENST00000393546 EAPPQ56P03 285 aaPredicted RBP23.53■■□□□ 1.36
PDLIM7-204ENST00000393546 FBXO33Q7Z6M2 555 aa23.53■■□□□ 1.36
PDLIM7-204ENST00000393546 AGBL3Q8NEM8 1001 aa23.53■■□□□ 1.36
PDLIM7-204ENST00000393546 ADARB2Q9NS39 739 aaKnown RBP23.53■■□□□ 1.36
PDLIM7-204ENST00000393546 SURF6O75683 361 aaKnown RBP23.52■■□□□ 1.36
PDLIM7-204ENST00000393546 GTF2IP78347 998 aa23.52■■□□□ 1.36
PDLIM7-204ENST00000393546 TFCP2Q12800 502 aa23.52■■□□□ 1.36
PDLIM7-204ENST00000393546 OS9Q13438 667 aaPredicted RBP23.52■■□□□ 1.36
PDLIM7-204ENST00000393546 AKAP2Q9Y2D5 859 aa23.52■■□□□ 1.36
PDLIM7-204ENST00000393546 DACT2Q5SW24 774 aa23.51■■□□□ 1.35
PDLIM7-204ENST00000393546 USP50Q70EL3 339 aaPredicted RBP23.51■■□□□ 1.35
PDLIM7-204ENST00000393546 MICALL2Q8IY33 904 aa23.51■■□□□ 1.35
PDLIM7-204ENST00000393546 SMC1BQ8NDV3 1235 aa23.51■■□□□ 1.35
PDLIM7-204ENST00000393546 CLEC11AQ9Y240 323 aa23.51■■□□□ 1.35
PDLIM7-204ENST00000393546 PSME4Q14997 1843 aa23.5■■□□□ 1.35
PDLIM7-204ENST00000393546 HMMRO75330 724 aa23.5■■□□□ 1.35
PDLIM7-204ENST00000393546 SASH1O94885 1247 aa23.5■■□□□ 1.35
PDLIM7-204ENST00000393546 FSTL1Q12841 308 aa23.5■■□□□ 1.35
PDLIM7-204ENST00000393546 TDRD7Q8NHU6 1098 aaKnown RBP23.5■■□□□ 1.35
PDLIM7-204ENST00000393546 NOP58Q9Y2X3 529 aaKnown RBP23.5■■□□□ 1.35
PDLIM7-204ENST00000393546 BCAMP50895 628 aa23.49■■□□□ 1.35
PDLIM7-204ENST00000393546 LDHDQ86WU2 507 aa23.49■■□□□ 1.35
PDLIM7-204ENST00000393546 GMLQ99445 158 aa23.49■■□□□ 1.35
PDLIM7-204ENST00000393546 MYO3BQ8WXR4 1341 aa23.49■■□□□ 1.35
PDLIM7-204ENST00000393546 FRAT2O75474 233 aaPredicted RBP23.48■■□□□ 1.35
PDLIM7-204ENST00000393546 POTEIP0CG38 1075 aa23.48■■□□□ 1.35
PDLIM7-204ENST00000393546 POTEJP0CG39 1038 aa23.48■■□□□ 1.35
PDLIM7-204ENST00000393546 CHADLQ6NUI6 762 aa23.48■■□□□ 1.35
PDLIM7-204ENST00000393546 USP17L8P0C7I0 530 aa23.47■■□□□ 1.35
PDLIM7-204ENST00000393546 TIMM10P62072 90 aa23.47■■□□□ 1.35
PDLIM7-204ENST00000393546 MXD3Q9BW11 206 aa23.47■■□□□ 1.35
PDLIM7-204ENST00000393546 SHTN1A0MZ66 631 aa23.46■■□□□ 1.35
PDLIM7-204ENST00000393546 ZNF609O15014 1411 aa23.46■■□□□ 1.35
PDLIM7-204ENST00000393546 HSP90AB4PQ58FF6 505 aa23.46■■□□□ 1.35
PDLIM7-204ENST00000393546 FAM205AQ6ZU69 1335 aa23.46■■□□□ 1.35
PDLIM7-204ENST00000393546 NEUROD6Q96NK8 337 aa23.46■■□□□ 1.35
PDLIM7-204ENST00000393546 GNL3LQ9NVN8 582 aaKnown RBP23.46■■□□□ 1.35
PDLIM7-204ENST00000393546 A0A1B0GUL7 405 aa23.45■■□□□ 1.34
PDLIM7-204ENST00000393546 MMP14P50281 582 aa23.45■■□□□ 1.34
PDLIM7-204ENST00000393546 FKBP1AP62942 108 aaKnown RBP23.45■■□□□ 1.34
PDLIM7-204ENST00000393546 SIRT2Q8IXJ6 389 aa23.45■■□□□ 1.34
PDLIM7-204ENST00000393546 OGFOD1Q8N543 542 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms