RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 TBC1D16Q8TBP0 767 aa15.28■□□□□ 0.04
NIF3L1-201ENST00000359683 LPIN2Q92539 896 aa15.28■□□□□ 0.04
NIF3L1-201ENST00000359683 RTFDC1Q9BY42 306 aaPredicted RBP15.28■□□□□ 0.04
NIF3L1-201ENST00000359683 POLLQ9UGP5 575 aa15.28■□□□□ 0.04
NIF3L1-201ENST00000359683 GGA1Q9UJY5 639 aa15.28■□□□□ 0.04
NIF3L1-201ENST00000359683 ZNF804BA4D1E1 1349 aa15.27■□□□□ 0.04
NIF3L1-201ENST00000359683 LTBP1Q14766 1721 aa15.27■□□□□ 0.03
NIF3L1-201ENST00000359683 A0A1B0GUL7 405 aa15.27■□□□□ 0.03
NIF3L1-201ENST00000359683 ATP2B3Q16720 1220 aa15.27■□□□□ 0.03
NIF3L1-201ENST00000359683 C15orf52Q6ZUT6 534 aaKnown RBP15.26■□□□□ 0.03
NIF3L1-201ENST00000359683 ZBTB47Q9UFB7 747 aaPredicted RBP15.26■□□□□ 0.03
NIF3L1-201ENST00000359683 UFL1O94874 794 aa15.25■□□□□ 0.03
NIF3L1-201ENST00000359683 IFIT1P09914 478 aaKnown RBP15.25■□□□□ 0.03
NIF3L1-201ENST00000359683 SLC5A1P13866 664 aa15.25■□□□□ 0.03
NIF3L1-201ENST00000359683 KCNJ4P48050 445 aa15.25■□□□□ 0.03
NIF3L1-201ENST00000359683 AACSQ86V21 672 aa15.25■□□□□ 0.03
NIF3L1-201ENST00000359683 C16orf71Q8IYS4 520 aaPredicted RBP15.25■□□□□ 0.03
NIF3L1-201ENST00000359683 PSMD1Q99460 953 aa15.25■□□□□ 0.03
NIF3L1-201ENST00000359683 LNPKQ9C0E8 428 aa15.25■□□□□ 0.03
NIF3L1-201ENST00000359683 IRS2Q9Y4H2 1338 aa15.25■□□□□ 0.03
NIF3L1-201ENST00000359683 ZNF609O15014 1411 aa15.25■□□□□ 0.03
NIF3L1-201ENST00000359683 C6orf229H3BNL8 230 aa15.25■□□□□ 0.03
NIF3L1-201ENST00000359683 ARHGAP27Q6ZUM4 889 aa15.25■□□□□ 0.03
NIF3L1-201ENST00000359683 SUPT20HQ8NEM7 779 aa15.25■□□□□ 0.03
NIF3L1-201ENST00000359683 NEUROD6Q96NK8 337 aa15.25■□□□□ 0.03
NIF3L1-201ENST00000359683 CCDC8Q9H0W5 538 aaPredicted RBP15.25■□□□□ 0.03
NIF3L1-201ENST00000359683 DUOX1Q9NRD9 1551 aa15.24■□□□□ 0.03
NIF3L1-201ENST00000359683 SBF1O95248 1867 aa15.24■□□□□ 0.03
NIF3L1-201ENST00000359683 FKBP4Q02790 459 aaKnown RBP eCLIP15.24■□□□□ 0.03
NIF3L1-201ENST00000359683 XAGE2Q96GT9 111 aa15.24■□□□□ 0.03
NIF3L1-201ENST00000359683 DBNDD2Q9BQY9 259 aa15.24■□□□□ 0.03
NIF3L1-201ENST00000359683 DBNLQ9UJU6 430 aaKnown RBP15.24■□□□□ 0.03
NIF3L1-201ENST00000359683 IFIT2P09913 472 aaKnown RBP15.23■□□□□ 0.03
NIF3L1-201ENST00000359683 ADORA1P30542 326 aa15.23■□□□□ 0.03
NIF3L1-201ENST00000359683 TXNRD3Q86VQ6 643 aa15.23■□□□□ 0.03
NIF3L1-201ENST00000359683 EYA3Q99504 573 aa15.23■□□□□ 0.03
NIF3L1-201ENST00000359683 VPS33BQ9H267 617 aa15.23■□□□□ 0.03
NIF3L1-201ENST00000359683 FER1L6Q2WGJ9 1857 aa15.23■□□□□ 0.03
NIF3L1-201ENST00000359683 NFKBIEO00221 500 aa15.22■□□□□ 0.03
NIF3L1-201ENST00000359683 KIF3CO14782 793 aa15.22■□□□□ 0.03
NIF3L1-201ENST00000359683 KLRK1P26718 216 aa15.22■□□□□ 0.03
NIF3L1-201ENST00000359683 FBXO33Q7Z6M2 555 aa15.22■□□□□ 0.03
NIF3L1-201ENST00000359683 FAM84BQ96KN1 310 aaPredicted RBP15.22■□□□□ 0.03
NIF3L1-201ENST00000359683 GPR101Q96P66 508 aaPredicted RBP15.22■□□□□ 0.03
NIF3L1-201ENST00000359683 TLR7Q9NYK1 1049 aaKnown RBP15.22■□□□□ 0.03
NIF3L1-201ENST00000359683 SALL3Q9BXA9 1300 aa15.22■□□□□ 0.03
NIF3L1-201ENST00000359683 LTBP3Q9NS15 1303 aa15.22■□□□□ 0.03
NIF3L1-201ENST00000359683 MED23Q9ULK4 1368 aa15.22■□□□□ 0.03
NIF3L1-201ENST00000359683 PDE4AP27815 886 aa15.21■□□□□ 0.03
NIF3L1-201ENST00000359683 WASHC4Q2M389 1173 aa15.21■□□□□ 0.03
NIF3L1-201ENST00000359683 OTUD7AQ8TE49 926 aaPredicted RBP15.21■□□□□ 0.03
NIF3L1-201ENST00000359683 ZC3H12CQ9C0D7 883 aaKnown RBP15.21■□□□□ 0.03
NIF3L1-201ENST00000359683 BCL11AQ9H165 835 aa15.21■□□□□ 0.03
NIF3L1-201ENST00000359683 TAOK3Q9H2K8 898 aa15.21■□□□□ 0.03
NIF3L1-201ENST00000359683 HSPA6P17066 643 aa15.21■□□□□ 0.02
NIF3L1-201ENST00000359683 KIAA2012Q0VF49 1180 aa15.21■□□□□ 0.02
NIF3L1-201ENST00000359683 CAVIN4Q5BKX8 364 aa15.21■□□□□ 0.02
NIF3L1-201ENST00000359683 ARAP2Q8WZ64 1704 aa15.2■□□□□ 0.02
NIF3L1-201ENST00000359683 RIMBP2O15034 1052 aa15.2■□□□□ 0.02
NIF3L1-201ENST00000359683 HIBADHP31937 336 aaKnown RBP15.2■□□□□ 0.02
NIF3L1-201ENST00000359683 GYG1P46976 350 aa15.2■□□□□ 0.02
NIF3L1-201ENST00000359683 BCAMP50895 628 aa15.2■□□□□ 0.02
NIF3L1-201ENST00000359683 CCDC102BQ68D86 513 aa15.2■□□□□ 0.02
NIF3L1-201ENST00000359683 PLEKHM2Q8IWE5 1019 aa15.2■□□□□ 0.02
NIF3L1-201ENST00000359683 ZNF512BQ96KM6 892 aaPredicted RBP15.2■□□□□ 0.02
NIF3L1-201ENST00000359683 STAP2Q9UGK3 403 aa15.2■□□□□ 0.02
NIF3L1-201ENST00000359683 TIAM2Q8IVF5 1701 aa15.19■□□□□ 0.02
NIF3L1-201ENST00000359683 PHKA1P46020 1223 aa15.19■□□□□ 0.02
NIF3L1-201ENST00000359683 CCDC158Q5M9N0 1113 aa15.19■□□□□ 0.02
NIF3L1-201ENST00000359683 GORABQ5T7V8 394 aa15.19■□□□□ 0.02
NIF3L1-201ENST00000359683 ZNF277Q9NRM2 450 aaPredicted RBP15.19■□□□□ 0.02
NIF3L1-201ENST00000359683 ECHDC1Q9NTX5 307 aa15.19■□□□□ 0.02
NIF3L1-201ENST00000359683 CCDC88AQ3V6T2 1871 aa15.19■□□□□ 0.02
NIF3L1-201ENST00000359683 TTC41PQ6P2S7 1318 aa15.18■□□□□ 0.02
NIF3L1-201ENST00000359683 MX1P20591 662 aa15.18■□□□□ 0.02
NIF3L1-201ENST00000359683 PDE1AP54750 535 aa15.18■□□□□ 0.02
NIF3L1-201ENST00000359683 C9orf131Q5VYM1 1079 aa15.18■□□□□ 0.02
NIF3L1-201ENST00000359683 ZNF804AQ7Z570 1209 aa15.18■□□□□ 0.02
NIF3L1-201ENST00000359683 COA1Q9GZY4 146 aa15.18■□□□□ 0.02
NIF3L1-201ENST00000359683 OSBPL3Q9H4L5 887 aa15.18■□□□□ 0.02
NIF3L1-201ENST00000359683 CD209Q9NNX6 404 aa15.18■□□□□ 0.02
NIF3L1-201ENST00000359683 PPIP5K2O43314 1243 aa15.17■□□□□ 0.02
NIF3L1-201ENST00000359683 UQCRFS1P1P0C7P4 283 aa15.17■□□□□ 0.02
NIF3L1-201ENST00000359683 IL1R1P14778 569 aa15.17■□□□□ 0.02
NIF3L1-201ENST00000359683 ATP5JP18859 108 aa15.17■□□□□ 0.02
NIF3L1-201ENST00000359683 IARSP41252 1262 aaKnown RBP15.17■□□□□ 0.02
NIF3L1-201ENST00000359683 PRELPP51888 382 aa15.17■□□□□ 0.02
NIF3L1-201ENST00000359683 RASSF7Q02833 373 aa15.17■□□□□ 0.02
NIF3L1-201ENST00000359683 AOC3Q16853 763 aa15.17■□□□□ 0.02
NIF3L1-201ENST00000359683 VPS37DQ86XT2 251 aa15.17■□□□□ 0.02
NIF3L1-201ENST00000359683 TDRD7Q8NHU6 1098 aaKnown RBP15.17■□□□□ 0.02
NIF3L1-201ENST00000359683 NMRK2Q9NPI5 230 aa15.17■□□□□ 0.02
NIF3L1-201ENST00000359683 ARID4AP29374 1257 aaPredicted RBP15.17■□□□□ 0.02
NIF3L1-201ENST00000359683 TTC39AQ5SRH9 613 aa15.17■□□□□ 0.02
NIF3L1-201ENST00000359683 SKAP1Q86WV1 359 aa15.17■□□□□ 0.02
NIF3L1-201ENST00000359683 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.17■□□□□ 0.02
NIF3L1-201ENST00000359683 GPATCH3Q96I76 525 aa15.17■□□□□ 0.02
NIF3L1-201ENST00000359683 GNL3LQ9NVN8 582 aaKnown RBP15.17■□□□□ 0.02
NIF3L1-201ENST00000359683 AOX1Q06278 1338 aa15.16■□□□□ 0.02
NIF3L1-201ENST00000359683 WDR90Q96KV7 1748 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms