RNA–Protein interactions for RNA: ENST00000330133.4

MRPL54-201, Transcript of mitochondrial ribosomal protein L54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL54, Length 626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54-201ENST00000330133 KLRK1P26718 216 aa23.57■■□□□ 1.36
MRPL54-201ENST00000330133 GMPSP49915 693 aaPredicted RBP23.57■■□□□ 1.36
MRPL54-201ENST00000330133 C1orf115Q9H7X2 142 aa23.57■■□□□ 1.36
MRPL54-201ENST00000330133 PA2G4Q9UQ80 394 aaKnown RBP23.57■■□□□ 1.36
MRPL54-201ENST00000330133 PDE8BO95263 885 aa23.56■■□□□ 1.36
MRPL54-201ENST00000330133 ATP8B2P98198 1209 aa23.56■■□□□ 1.36
MRPL54-201ENST00000330133 ZNF804AQ7Z570 1209 aa23.56■■□□□ 1.36
MRPL54-201ENST00000330133 TAF1DQ9H5J8 278 aaPredicted RBP23.56■■□□□ 1.36
MRPL54-201ENST00000330133 EPHX2P34913 555 aa23.55■■□□□ 1.36
MRPL54-201ENST00000330133 IL15P40933 162 aaPredicted RBP23.55■■□□□ 1.36
MRPL54-201ENST00000330133 C1QTNF8P60827 252 aa23.55■■□□□ 1.36
MRPL54-201ENST00000330133 ATG9AQ7Z3C6 839 aa23.55■■□□□ 1.36
MRPL54-201ENST00000330133 RBM46Q8TBY0 533 aaKnown RBP23.55■■□□□ 1.36
MRPL54-201ENST00000330133 CEP126Q9P2H0 1117 aa23.55■■□□□ 1.36
MRPL54-201ENST00000330133 PNMA6EA0A0J9YXQ4 647 aa23.54■■□□□ 1.36
MRPL54-201ENST00000330133 USP17L3A6NCW0 530 aa23.54■■□□□ 1.36
MRPL54-201ENST00000330133 USP17L4A6NCW7 530 aa23.54■■□□□ 1.36
MRPL54-201ENST00000330133 VIL1P09327 827 aaKnown RBP23.54■■□□□ 1.36
MRPL54-201ENST00000330133 SCNN1DP51172 638 aa23.54■■□□□ 1.36
MRPL54-201ENST00000330133 C20orf194Q5TEA3 1177 aa23.54■■□□□ 1.36
MRPL54-201ENST00000330133 USP17L1Q7RTZ2 530 aa23.54■■□□□ 1.36
MRPL54-201ENST00000330133 VGLL2Q8N8G2 317 aa23.54■■□□□ 1.36
MRPL54-201ENST00000330133 CD209Q9NNX6 404 aa23.54■■□□□ 1.36
MRPL54-201ENST00000330133 RPS12P25398 132 aaKnown RBP23.53■■□□□ 1.36
MRPL54-201ENST00000330133 EPS15P42566 896 aa23.53■■□□□ 1.36
MRPL54-201ENST00000330133 PUM3Q15397 648 aaKnown RBP23.53■■□□□ 1.36
MRPL54-201ENST00000330133 DPF2Q92785 391 aa23.53■■□□□ 1.36
MRPL54-201ENST00000330133 FBXW7Q969H0 707 aa23.53■■□□□ 1.36
MRPL54-201ENST00000330133 GPRC5DQ9NZD1 345 aa23.53■■□□□ 1.36
MRPL54-201ENST00000330133 ZBTB12Q9Y330 459 aaPredicted RBP23.53■■□□□ 1.36
MRPL54-201ENST00000330133 IRS2Q9Y4H2 1338 aa23.53■■□□□ 1.36
MRPL54-201ENST00000330133 IFIT1P09914 478 aaKnown RBP23.52■■□□□ 1.36
MRPL54-201ENST00000330133 EAPPQ56P03 285 aaPredicted RBP23.52■■□□□ 1.36
MRPL54-201ENST00000330133 PNMA8AQ86V59 439 aaPredicted RBP23.52■■□□□ 1.36
MRPL54-201ENST00000330133 H7C1D1 291 aa23.51■■□□□ 1.35
MRPL54-201ENST00000330133 HIBADHP31937 336 aaKnown RBP23.51■■□□□ 1.35
MRPL54-201ENST00000330133 RRP1P56182 461 aaKnown RBP23.51■■□□□ 1.35
MRPL54-201ENST00000330133 G3BP1Q13283 466 aaKnown RBP eCLIP23.51■■□□□ 1.35
MRPL54-201ENST00000330133 RSBN1LQ6PCB5 846 aaPredicted RBP23.51■■□□□ 1.35
MRPL54-201ENST00000330133 SMC1BQ8NDV3 1235 aa23.51■■□□□ 1.35
MRPL54-201ENST00000330133 SSH3Q8TE77 659 aa23.51■■□□□ 1.35
MRPL54-201ENST00000330133 CNOT7Q9UIV1 285 aaKnown RBP23.51■■□□□ 1.35
MRPL54-201ENST00000330133 SLC5A1P13866 664 aa23.5■■□□□ 1.35
MRPL54-201ENST00000330133 POLA2Q14181 598 aa23.5■■□□□ 1.35
MRPL54-201ENST00000330133 CAVIN4Q5BKX8 364 aa23.5■■□□□ 1.35
MRPL54-201ENST00000330133 STRIP1Q5VSL9 837 aa23.5■■□□□ 1.35
MRPL54-201ENST00000330133 TTLL5Q6EMB2 1281 aa23.5■■□□□ 1.35
MRPL54-201ENST00000330133 VPS37DQ86XT2 251 aa23.5■■□□□ 1.35
MRPL54-201ENST00000330133 LPIN2Q92539 896 aa23.5■■□□□ 1.35
MRPL54-201ENST00000330133 ADARB2Q9NS39 739 aaKnown RBP23.5■■□□□ 1.35
MRPL54-201ENST00000330133 ZBTB40Q9NUA8 1239 aa23.5■■□□□ 1.35
MRPL54-201ENST00000330133 CLEC11AQ9Y240 323 aa23.5■■□□□ 1.35
MRPL54-201ENST00000330133 IL1R1P14778 569 aa23.49■■□□□ 1.35
MRPL54-201ENST00000330133 FGFR2P21802 821 aa23.49■■□□□ 1.35
MRPL54-201ENST00000330133 GYG1P46976 350 aa23.49■■□□□ 1.35
MRPL54-201ENST00000330133 FSTL1Q12841 308 aa23.49■■□□□ 1.35
MRPL54-201ENST00000330133 CEP85Q6P2H3 762 aa23.49■■□□□ 1.35
MRPL54-201ENST00000330133 USP50Q70EL3 339 aaPredicted RBP23.49■■□□□ 1.35
MRPL54-201ENST00000330133 AGBL3Q8NEM8 1001 aa23.49■■□□□ 1.35
MRPL54-201ENST00000330133 FAM84BQ96KN1 310 aaPredicted RBP23.49■■□□□ 1.35
MRPL54-201ENST00000330133 GTF2IP78347 998 aa23.48■■□□□ 1.35
MRPL54-201ENST00000330133 LDHDQ86WU2 507 aa23.48■■□□□ 1.35
MRPL54-201ENST00000330133 MICALL2Q8IY33 904 aa23.48■■□□□ 1.35
MRPL54-201ENST00000330133 ATP2B3Q16720 1220 aa23.47■■□□□ 1.35
MRPL54-201ENST00000330133 DACT2Q5SW24 774 aa23.47■■□□□ 1.35
MRPL54-201ENST00000330133 CHADLQ6NUI6 762 aa23.47■■□□□ 1.35
MRPL54-201ENST00000330133 FBXO33Q7Z6M2 555 aa23.47■■□□□ 1.35
MRPL54-201ENST00000330133 SCN4AP35499 1836 aa23.47■■□□□ 1.35
MRPL54-201ENST00000330133 SURF6O75683 361 aaKnown RBP23.46■■□□□ 1.35
MRPL54-201ENST00000330133 POTEIP0CG38 1075 aa23.46■■□□□ 1.35
MRPL54-201ENST00000330133 POTEJP0CG39 1038 aa23.46■■□□□ 1.35
MRPL54-201ENST00000330133 OS9Q13438 667 aaPredicted RBP23.46■■□□□ 1.35
MRPL54-201ENST00000330133 RPAP2Q8IXW5 612 aaPredicted RBP23.46■■□□□ 1.35
MRPL54-201ENST00000330133 TDRD7Q8NHU6 1098 aaKnown RBP23.46■■□□□ 1.35
MRPL54-201ENST00000330133 AKAP2Q9Y2D5 859 aa23.46■■□□□ 1.35
MRPL54-201ENST00000330133 MYO3BQ8WXR4 1341 aa23.45■■□□□ 1.34
MRPL54-201ENST00000330133 TFCP2Q12800 502 aa23.45■■□□□ 1.34
MRPL54-201ENST00000330133 GMLQ99445 158 aa23.45■■□□□ 1.34
MRPL54-201ENST00000330133 A0A1B0GUL6 1792 aa23.45■■□□□ 1.34
MRPL54-201ENST00000330133 SHTN1A0MZ66 631 aa23.44■■□□□ 1.34
MRPL54-201ENST00000330133 FRAT2O75474 233 aaPredicted RBP23.44■■□□□ 1.34
MRPL54-201ENST00000330133 SASH1O94885 1247 aa23.44■■□□□ 1.34
MRPL54-201ENST00000330133 BCAMP50895 628 aa23.44■■□□□ 1.34
MRPL54-201ENST00000330133 MXD3Q9BW11 206 aa23.44■■□□□ 1.34
MRPL54-201ENST00000330133 HMMRO75330 724 aa23.43■■□□□ 1.34
MRPL54-201ENST00000330133 USP17L8P0C7I0 530 aa23.43■■□□□ 1.34
MRPL54-201ENST00000330133 RBM26Q5T8P6 1007 aaKnown RBP23.42■■□□□ 1.34
MRPL54-201ENST00000330133 NOP58Q9Y2X3 529 aaKnown RBP23.42■■□□□ 1.34
MRPL54-201ENST00000330133 ZNF609O15014 1411 aa23.42■■□□□ 1.34
MRPL54-201ENST00000330133 SCN9AQ15858 1988 aa23.41■■□□□ 1.34
MRPL54-201ENST00000330133 ZNF280AP59817 542 aaPredicted RBP23.41■■□□□ 1.34
MRPL54-201ENST00000330133 TIMM10P62072 90 aa23.41■■□□□ 1.34
MRPL54-201ENST00000330133 FKBP1AP62942 108 aaKnown RBP23.41■■□□□ 1.34
MRPL54-201ENST00000330133 TBC1D10BQ4KMP7 808 aaPredicted RBP23.41■■□□□ 1.34
MRPL54-201ENST00000330133 SAMD7Q7Z3H4 446 aa23.41■■□□□ 1.34
MRPL54-201ENST00000330133 OGFOD1Q8N543 542 aa23.41■■□□□ 1.34
MRPL54-201ENST00000330133 TRPM4Q8TD43 1214 aa23.41■■□□□ 1.34
MRPL54-201ENST00000330133 GNL3LQ9NVN8 582 aaKnown RBP23.41■■□□□ 1.34
MRPL54-201ENST00000330133 IQSEC3Q9UPP2 1182 aaPredicted RBP23.41■■□□□ 1.34
MRPL54-201ENST00000330133 FAM205AQ6ZU69 1335 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms