RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 CD276Q5ZPR3 534 aa15.84■□□□□ 0.13
CLN6-221ENST00000637494 SLC16A9Q7RTY1 509 aa15.84■□□□□ 0.13
CLN6-221ENST00000637494 TMEM179BQ7Z7N9 219 aa15.84■□□□□ 0.13
CLN6-221ENST00000637494 DNAJC9Q8WXX5 260 aa15.84■□□□□ 0.13
CLN6-221ENST00000637494 DVL3Q92997 716 aaPredicted RBP15.84■□□□□ 0.13
CLN6-221ENST00000637494 ZMYND19Q96E35 227 aaPredicted RBP15.84■□□□□ 0.13
CLN6-221ENST00000637494 NUDT16L1Q9BRJ7 211 aaKnown RBP15.84■□□□□ 0.13
CLN6-221ENST00000637494 ZMAT3Q9HA38 289 aaKnown RBP15.84■□□□□ 0.13
CLN6-221ENST00000637494 BRD7Q9NPI1 651 aa15.84■□□□□ 0.13
CLN6-221ENST00000637494 PTBP3O95758 552 aaKnown RBP15.83■□□□□ 0.12
CLN6-221ENST00000637494 MTNR1AP48039 350 aa15.83■□□□□ 0.12
CLN6-221ENST00000637494 ZNF121P58317 390 aaPredicted RBP15.83■□□□□ 0.12
CLN6-221ENST00000637494 SLC35D3Q5M8T2 416 aa15.83■□□□□ 0.12
CLN6-221ENST00000637494 WDR25Q64LD2 544 aaPredicted RBP15.83■□□□□ 0.12
CLN6-221ENST00000637494 TIGD4Q8IY51 512 aa15.83■□□□□ 0.12
CLN6-221ENST00000637494 PARP8Q8N3A8 854 aa15.83■□□□□ 0.12
CLN6-221ENST00000637494 SIGLECL1Q8N7X8 197 aa15.83■□□□□ 0.12
CLN6-221ENST00000637494 C19orf18Q8NEA5 215 aa15.83■□□□□ 0.12
CLN6-221ENST00000637494 CSNK2A3Q8NEV1 391 aa15.83■□□□□ 0.12
CLN6-221ENST00000637494 RGCCQ9H4X1 137 aa15.83■□□□□ 0.12
CLN6-221ENST00000637494 ZNF69Q9UC07 566 aa15.83■□□□□ 0.12
CLN6-221ENST00000637494 KIR2DS1A0A191URI9 304 aa15.82■□□□□ 0.12
CLN6-221ENST00000637494 TMEM89A2RUT3 159 aa15.82■□□□□ 0.12
CLN6-221ENST00000637494 C5orf63A6NC05 138 aa15.82■□□□□ 0.12
CLN6-221ENST00000637494 OOEPA6NGQ2 149 aa15.82■□□□□ 0.12
CLN6-221ENST00000637494 C3orf80F5H4A9 247 aa15.82■□□□□ 0.12
CLN6-221ENST00000637494 ENSAO43768 121 aaKnown RBP15.82■□□□□ 0.12
CLN6-221ENST00000637494 TIPRLO75663 272 aa15.82■□□□□ 0.12
CLN6-221ENST00000637494 OPRL1P41146 370 aa15.82■□□□□ 0.12
CLN6-221ENST00000637494 UBA52P62987 128 aaKnown RBP15.82■□□□□ 0.12
CLN6-221ENST00000637494 FAM3AP98173 230 aa15.82■□□□□ 0.12
CLN6-221ENST00000637494 CDK5Q00535 292 aa15.82■□□□□ 0.12
CLN6-221ENST00000637494 SFRP4Q6FHJ7 346 aaPredicted RBP15.82■□□□□ 0.12
CLN6-221ENST00000637494 LYPD2Q6UXB3 125 aa15.82■□□□□ 0.12
CLN6-221ENST00000637494 DOK3Q7L591 496 aa15.82■□□□□ 0.12
CLN6-221ENST00000637494 CPOQ8IVL8 374 aa15.82■□□□□ 0.12
CLN6-221ENST00000637494 C3orf56Q8N813 242 aa15.82■□□□□ 0.12
CLN6-221ENST00000637494 OTOSQ8NHW6 89 aa15.82■□□□□ 0.12
CLN6-221ENST00000637494 SGK3Q96BR1 496 aa15.82■□□□□ 0.12
CLN6-221ENST00000637494 NRBF2Q96F24 287 aa15.82■□□□□ 0.12
CLN6-221ENST00000637494 NIPAL2Q9H841 368 aa15.82■□□□□ 0.12
CLN6-221ENST00000637494 POMPQ9Y244 141 aa15.82■□□□□ 0.12
CLN6-221ENST00000637494 ARHGAP32A7KAX9 2087 aa15.82■□□□□ 0.12
CLN6-221ENST00000637494 WNK2Q9Y3S1 2297 aa15.82■□□□□ 0.12
CLN6-221ENST00000637494 TCRBV3S1A0A5B6 114 aa15.81■□□□□ 0.12
CLN6-221ENST00000637494 ANXA2P2A6NMY6 339 aa15.81■□□□□ 0.12
CLN6-221ENST00000637494 ADAM20O43506 726 aa15.81■□□□□ 0.12
CLN6-221ENST00000637494 SELENOFO60613 162 aa15.81■□□□□ 0.12
CLN6-221ENST00000637494 PRKACGP22612 351 aa15.81■□□□□ 0.12
CLN6-221ENST00000637494 PSMB10P40306 273 aa15.81■□□□□ 0.12
CLN6-221ENST00000637494 COMPP49747 757 aaPredicted RBP15.81■□□□□ 0.12
CLN6-221ENST00000637494 RASSF2P50749 326 aa15.81■□□□□ 0.12
CLN6-221ENST00000637494 PAX2Q02962 417 aa15.81■□□□□ 0.12
CLN6-221ENST00000637494 BAMBIQ13145 260 aa15.81■□□□□ 0.12
CLN6-221ENST00000637494 KLF17Q5JT82 389 aaPredicted RBP15.81■□□□□ 0.12
CLN6-221ENST00000637494 HS3ST5Q8IZT8 346 aa15.81■□□□□ 0.12
CLN6-221ENST00000637494 ZDHHC22Q8N966 263 aa15.81■□□□□ 0.12
CLN6-221ENST00000637494 PAPD5Q8NDF8 572 aaKnown RBP15.81■□□□□ 0.12
CLN6-221ENST00000637494 UPRTQ96BW1 309 aa15.81■□□□□ 0.12
CLN6-221ENST00000637494 PAPOLGQ9BWT3 736 aaKnown RBP15.81■□□□□ 0.12
CLN6-221ENST00000637494 PRRG3Q9BZD7 231 aa15.81■□□□□ 0.12
CLN6-221ENST00000637494 ABCB9Q9NP78 766 aa15.81■□□□□ 0.12
CLN6-221ENST00000637494 LAMP5Q9UJQ1 280 aa15.81■□□□□ 0.12
CLN6-221ENST00000637494 hCG_38984A0A1B0GV85 526 aa15.8■□□□□ 0.12
CLN6-221ENST00000637494 LIPFP07098 398 aa15.8■□□□□ 0.12
CLN6-221ENST00000637494 ANOS1P23352 680 aa15.8■□□□□ 0.12
CLN6-221ENST00000637494 CFPP27918 469 aa15.8■□□□□ 0.12
CLN6-221ENST00000637494 NAA10P41227 235 aaPredicted RBP15.8■□□□□ 0.12
CLN6-221ENST00000637494 GSK3AP49840 483 aa15.8■□□□□ 0.12
CLN6-221ENST00000637494 IL5RAQ01344 420 aa15.8■□□□□ 0.12
CLN6-221ENST00000637494 SNAPC1Q16533 368 aa15.8■□□□□ 0.12
CLN6-221ENST00000637494 LCN1P1Q5VSP4 162 aa15.8■□□□□ 0.12
CLN6-221ENST00000637494 KCTD18Q6PI47 426 aaPredicted RBP15.8■□□□□ 0.12
CLN6-221ENST00000637494 KRT77Q7Z794 578 aa15.8■□□□□ 0.12
CLN6-221ENST00000637494 SLC7A6OSQ96CW6 309 aaPredicted RBP15.8■□□□□ 0.12
CLN6-221ENST00000637494 MICU1Q9BPX6 476 aa15.8■□□□□ 0.12
CLN6-221ENST00000637494 RNPEPL1Q9HAU8 725 aa15.8■□□□□ 0.12
CLN6-221ENST00000637494 SLC25A19Q9HC21 320 aa15.8■□□□□ 0.12
CLN6-221ENST00000637494 ESM1Q9NQ30 184 aa15.8■□□□□ 0.12
CLN6-221ENST00000637494 PAPOLBQ9NRJ5 636 aaKnown RBP15.8■□□□□ 0.12
CLN6-221ENST00000637494 ZNF391Q9UJN7 358 aa15.8■□□□□ 0.12
CLN6-221ENST00000637494 TRAV40A0A0B4J280 105 aa15.79■□□□□ 0.12
CLN6-221ENST00000637494 PRTN3P24158 256 aa15.79■□□□□ 0.12
CLN6-221ENST00000637494 MICBQ29980 383 aa15.79■□□□□ 0.12
CLN6-221ENST00000637494 ZNF841Q6ZN19 808 aa15.79■□□□□ 0.12
CLN6-221ENST00000637494 ZNF826PQ6ZT77 177 aa15.79■□□□□ 0.12
CLN6-221ENST00000637494 PRSS45Q7RTY3 260 aa15.79■□□□□ 0.12
CLN6-221ENST00000637494 PNLDC1Q8NA58 520 aaKnown RBP15.79■□□□□ 0.12
CLN6-221ENST00000637494 SLC25A28Q96A46 364 aa15.79■□□□□ 0.12
CLN6-221ENST00000637494 AMELYQ99218 206 aa15.79■□□□□ 0.12
CLN6-221ENST00000637494 RTL8AQ9BWD3 113 aa15.79■□□□□ 0.12
CLN6-221ENST00000637494 TVP23BQ9NYZ1 205 aa15.79■□□□□ 0.12
CLN6-221ENST00000637494 MPC1Q9Y5U8 109 aa15.79■□□□□ 0.12
CLN6-221ENST00000637494 IGHV3OR16-10A0A075B7F0 116 aa15.78■□□□□ 0.12
CLN6-221ENST00000637494 GYPAP02724 150 aa15.78■□□□□ 0.12
CLN6-221ENST00000637494 CRISP1P54107 249 aa15.78■□□□□ 0.12
CLN6-221ENST00000637494 BPIFB3P59826 476 aa15.78■□□□□ 0.12
CLN6-221ENST00000637494 FGF12P61328 243 aa15.78■□□□□ 0.12
CLN6-221ENST00000637494 APOFQ13790 326 aa15.78■□□□□ 0.12
CLN6-221ENST00000637494 GPR157Q5UAW9 335 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms