RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 UNC13CQ8NB66 2214 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 RFPL4AA6NLU0 287 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 RFPL4AL1F8VTS6 287 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 SPI1P17947 270 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 FPR2P25090 351 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 DLX1P56177 255 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 GSCP56915 257 aaPredicted RBP5.04□□□□□ -1.6
SCN1A-209ENST00000635750 PPP2CBP62714 309 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 C11orf91Q3C1V1 193 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 GTDC1Q4AE62 458 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 C19orf54Q5BKX5 351 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 NCR3LG1Q68D85 454 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 PARM1Q6UWI2 310 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 TGIF2LXQ8IUE1 241 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 BCORP1Q8N888 145 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 ZNF740Q8NDX6 193 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 OR2I1PQ8NGU4 316 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 TMED6Q8WW62 240 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 RND1Q92730 232 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 IL22RA2Q969J5 263 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 TM4SF18Q96CE8 201 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 CXorf58Q96LI9 332 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 C3orf30Q96M34 536 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 CABLES2Q9BTV7 478 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 MRPL37Q9BZE1 423 aaKnown RBP5.04□□□□□ -1.6
SCN1A-209ENST00000635750 TGIF2Q9GZN2 237 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 MKRN2Q9H000 416 aaKnown RBP5.04□□□□□ -1.6
SCN1A-209ENST00000635750 CYSLTR2Q9NS75 346 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 NPAP1Q9NZP6 1156 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 FOXJ3Q9UPW0 622 aa5.04□□□□□ -1.6
SCN1A-209ENST00000635750 CDC14BO60729 498 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 CD22P20273 847 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 SLC35B1P78383 322 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 RELBQ01201 579 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 TMEM268Q5VZI3 342 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 METRNLQ641Q3 311 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 AMMECR1LQ6DCA0 310 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 DHRS13Q6UX07 377 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 ZNF534Q76KX8 674 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 TMEM116Q8NCL8 245 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 UBE2FQ969M7 185 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 SMIM7Q9BQ49 75 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 MS4A7Q9GZW8 240 aaPredicted RBP5.03□□□□□ -1.6
SCN1A-209ENST00000635750 TAAR3PQ9P1P4 343 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 CGGBP1Q9UFW8 167 aaPredicted RBP5.03□□□□□ -1.6
SCN1A-209ENST00000635750 GPR45Q9Y5Y3 372 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 UBE2L5PA0A1B0GUS4 154 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 LINC01553A4QN01 128 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 CBY3A6NI87 242 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 HIST1H1EP10412 219 aaKnown RBP5.03□□□□□ -1.6
SCN1A-209ENST00000635750 FCGR2CP31995 323 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 DDOSTP39656 456 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 UBE2MP61081 183 aaKnown RBP5.03□□□□□ -1.6
SCN1A-209ENST00000635750 FAM3AP98173 230 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 AQP6Q13520 282 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 TRA2AQ13595 282 aaKnown RBP eCLIP5.03□□□□□ -1.6
SCN1A-209ENST00000635750 KIAA0141Q14154 515 aaPredicted RBP5.03□□□□□ -1.6
SCN1A-209ENST00000635750 BCL7AQ4VC05 210 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 SCD5Q86SK9 330 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 WDTC1Q8N5D0 677 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 PFN4Q8NHR9 129 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 NPAS1Q99742 590 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 ST3GAL6Q9Y274 331 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 TRAV38-1A0A0B4J264 116 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 G3V2L1 256 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 HSBP1O75506 76 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 GPX3P22352 226 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 SHC1P29353 583 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 CCL7P80098 99 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 HTRA4P83105 476 aaPredicted RBP5.03□□□□□ -1.6
SCN1A-209ENST00000635750 SPEM2Q0P670 501 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 OR2G6Q5TZ20 316 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 AMIGO3Q86WK7 504 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 PIANPQ8IYJ0 282 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 COPS9Q8WXC6 57 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 PACRGQ96M98 296 aaPredicted RBP5.03□□□□□ -1.6
SCN1A-209ENST00000635750 A0A1B0GTQ1 180 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 KIAA1324LA8MWY0 1029 aaPredicted RBP5.03□□□□□ -1.6
SCN1A-209ENST00000635750 ADAM20O43506 726 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 TMIGD3P0DMS9 266 aaPredicted RBP5.03□□□□□ -1.6
SCN1A-209ENST00000635750 CD40P25942 277 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 CST5P28325 142 aaPredicted RBP5.03□□□□□ -1.6
SCN1A-209ENST00000635750 MDH2P40926 338 aaKnown RBP5.03□□□□□ -1.6
SCN1A-209ENST00000635750 PIGPP57054 158 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 MLF1P58340 268 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 ELFN2Q5R3F8 820 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 TIPARPQ7Z3E1 657 aaKnown RBP5.03□□□□□ -1.6
SCN1A-209ENST00000635750 REC114Q7Z4M0 266 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 OR10Z1Q8NGY1 313 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 NRSN2Q9GZP1 204 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 TXNIPQ9H3M7 391 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 FBXO8Q9NRD0 319 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 TUBAL3A6NHL2 446 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 GABRA1P14867 456 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 HTR1DP28221 377 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 IL11RAQ14626 422 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 SPATA46Q5T0L3 261 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 SCGB1D4Q6XE38 83 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 KIAA1958Q8N8K9 716 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 DEFB124Q8NES8 71 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms