RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 GFOD2Q3B7J2 385 aa8.25□□□□□ -1.09
PDLIM5-223ENST00000627587 SNAI3Q3KNW1 292 aa8.25□□□□□ -1.09
PDLIM5-223ENST00000627587 PABPC1L2AQ5JQF8 200 aa8.25□□□□□ -1.09
PDLIM5-223ENST00000627587 ANKRD16Q6P6B7 361 aa8.25□□□□□ -1.09
PDLIM5-223ENST00000627587 VWA1Q6PCB0 445 aa8.25□□□□□ -1.09
PDLIM5-223ENST00000627587 DPPA2Q7Z7J5 298 aa8.25□□□□□ -1.09
PDLIM5-223ENST00000627587 CD163Q86VB7 1156 aa8.25□□□□□ -1.09
PDLIM5-223ENST00000627587 LYPD6Q86Y78 171 aa8.25□□□□□ -1.09
PDLIM5-223ENST00000627587 OR52H1Q8NGJ2 320 aa8.25□□□□□ -1.09
PDLIM5-223ENST00000627587 OR51A2Q8NGJ7 313 aa8.25□□□□□ -1.09
PDLIM5-223ENST00000627587 OR1K1Q8NGR3 316 aa8.25□□□□□ -1.09
PDLIM5-223ENST00000627587 OR5H6Q8NGV6 325 aa8.25□□□□□ -1.09
PDLIM5-223ENST00000627587 MBD3L2Q8NHZ7 208 aaPredicted RBP8.25□□□□□ -1.09
PDLIM5-223ENST00000627587 TRMT10AQ8TBZ6 339 aaKnown RBP8.25□□□□□ -1.09
PDLIM5-223ENST00000627587 ADAT3Q96EY9 351 aaPredicted RBP8.25□□□□□ -1.09
PDLIM5-223ENST00000627587 DIRAS2Q96HU8 199 aa8.25□□□□□ -1.09
PDLIM5-223ENST00000627587 SP140LQ9H930 580 aa8.25□□□□□ -1.09
PDLIM5-223ENST00000627587 GPR84Q9NQS5 396 aa8.25□□□□□ -1.09
PDLIM5-223ENST00000627587 ZNF275Q9NSD4 429 aaPredicted RBP8.25□□□□□ -1.09
PDLIM5-223ENST00000627587 ABRACLQ9P1F3 81 aa8.25□□□□□ -1.09
PDLIM5-223ENST00000627587 RHBDD3Q9Y3P4 386 aa8.25□□□□□ -1.09
PDLIM5-223ENST00000627587 ADGRG4Q8IZF6 3080 aa8.24□□□□□ -1.09
PDLIM5-223ENST00000627587 A0A0U1RQV5 110 aa8.24□□□□□ -1.09
PDLIM5-223ENST00000627587 A6NIN4 97 aa8.24□□□□□ -1.09
PDLIM5-223ENST00000627587 TBX1O43435 398 aa8.24□□□□□ -1.09
PDLIM5-223ENST00000627587 UBL3O95164 117 aa8.24□□□□□ -1.09
PDLIM5-223ENST00000627587 HLA-HP01893 362 aa8.24□□□□□ -1.09
PDLIM5-223ENST00000627587 CD79AP11912 226 aa8.24□□□□□ -1.09
PDLIM5-223ENST00000627587 ARR3P36575 388 aa8.24□□□□□ -1.09
PDLIM5-223ENST00000627587 ART1P52961 327 aa8.24□□□□□ -1.09
PDLIM5-223ENST00000627587 C1orf185Q5T7R7 199 aa8.24□□□□□ -1.09
PDLIM5-223ENST00000627587 ZNF529Q6P280 563 aa8.24□□□□□ -1.09
PDLIM5-223ENST00000627587 TMEM53Q6P2H8 277 aa8.24□□□□□ -1.09
PDLIM5-223ENST00000627587 Q6ZSR3 168 aa8.24□□□□□ -1.09
PDLIM5-223ENST00000627587 Q6ZT83 130 aa8.24□□□□□ -1.09
PDLIM5-223ENST00000627587 DOK3Q7L591 496 aa8.24□□□□□ -1.09
PDLIM5-223ENST00000627587 ZNF584Q8IVC4 421 aa8.24□□□□□ -1.09
PDLIM5-223ENST00000627587 SERPINA12Q8IW75 414 aa8.24□□□□□ -1.09
PDLIM5-223ENST00000627587 PLPP7Q8NBV4 271 aa8.24□□□□□ -1.09
PDLIM5-223ENST00000627587 NAXEQ8NCW5 288 aa8.24□□□□□ -1.09
PDLIM5-223ENST00000627587 OR1J2Q8NGS2 313 aa8.24□□□□□ -1.09
PDLIM5-223ENST00000627587 ZNF671Q8TAW3 534 aa8.24□□□□□ -1.09
PDLIM5-223ENST00000627587 NANOS1Q8WY41 292 aaKnown RBP8.24□□□□□ -1.09
PDLIM5-223ENST00000627587 NINJ1Q92982 152 aa8.24□□□□□ -1.09
PDLIM5-223ENST00000627587 FGGYQ96C11 551 aa8.24□□□□□ -1.09
PDLIM5-223ENST00000627587 FAM71F1Q96KD3 344 aaPredicted RBP8.24□□□□□ -1.09
PDLIM5-223ENST00000627587 ZNF75AQ96N20 296 aa8.24□□□□□ -1.09
PDLIM5-223ENST00000627587 NKX3-1Q99801 234 aaPredicted RBP8.24□□□□□ -1.09
PDLIM5-223ENST00000627587 MRI1Q9BV20 369 aa8.24□□□□□ -1.09
PDLIM5-223ENST00000627587 OR10A2Q9H208 303 aa8.24□□□□□ -1.09
PDLIM5-223ENST00000627587 B3GNT2Q9NY97 397 aa8.24□□□□□ -1.09
PDLIM5-223ENST00000627587 TAS2R4Q9NYW5 299 aa8.24□□□□□ -1.09
PDLIM5-223ENST00000627587 LOC100509620A0A075B734 347 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 MEGF11A6BM72 1044 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 FABP12A6NFH5 140 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 FAM25AB3EWG3 89 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 FAM25CB3EWG5 89 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 FAM25GB3EWG6 89 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 CGAP01215 116 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 IL2RAP01589 272 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 EIF4EP06730 217 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 CRHP06850 196 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 COX5BP10606 129 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 CD99P14209 185 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 SNRPBP14678 240 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 ZNF20P17024 532 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 ELK1P19419 428 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 IGHV1-2P23083 117 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 CFPP27918 469 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 GNALP38405 381 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 EVX1P49640 407 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 RAB1AP62820 205 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 PLP2Q04941 152 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 HIKESHIQ53FT3 197 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 HES5Q5TA89 166 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 FAM166AQ6J272 317 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 FAM131AQ6UXB0 335 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 C3P1Q6ZMU1 363 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 NCCRP1Q6ZVX7 275 aaPredicted RBP8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 LRRC28Q86X40 367 aaPredicted RBP8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 SAMD12Q8N8I0 201 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 CCDC54Q8NEL0 328 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 OR5D14Q8NGL3 314 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 BCL2L2Q92843 193 aaPredicted RBP8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 FOXC2Q99958 501 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 PLEKHA1Q9HB21 404 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 HCFC1P51610 2035 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 A0A1B0GVG6 124 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 MTRF1O75570 445 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 LCATP04180 440 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 TMIGD3P0DMS9 266 aaPredicted RBP8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 TALDO1P37837 337 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 CLDN12P56749 244 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 TFF3Q07654 80 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 TNK1Q13470 666 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 MADCAM1Q13477 382 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 P2RY14Q15391 338 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 GSG1Q2KHT4 349 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 TBRG1Q3YBR2 411 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 GLT8D1Q68CQ7 371 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms