RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 ALG8Q9BVK2 526 aa17.22■□□□□ 0.35
PTCD3-220ENST00000627371 JAM3Q9BX67 310 aa17.22■□□□□ 0.35
PTCD3-220ENST00000627371 CHODLQ9H9P2 273 aa17.22■□□□□ 0.35
PTCD3-220ENST00000627371 GTF2A1LQ9UNN4 478 aa17.22■□□□□ 0.35
PTCD3-220ENST00000627371 NOP16Q9Y3C1 178 aaKnown RBP17.22■□□□□ 0.35
PTCD3-220ENST00000627371 H0YL77 283 aa17.21■□□□□ 0.35
PTCD3-220ENST00000627371 RP2O75695 350 aa17.21■□□□□ 0.35
PTCD3-220ENST00000627371 HLA-DPB1P04440 258 aa17.21■□□□□ 0.35
PTCD3-220ENST00000627371 TACSTD2P09758 323 aa17.21■□□□□ 0.35
PTCD3-220ENST00000627371 VHLP40337 213 aa17.21■□□□□ 0.35
PTCD3-220ENST00000627371 RIN1Q13671 783 aa17.21■□□□□ 0.35
PTCD3-220ENST00000627371 SNCBQ16143 134 aa17.21■□□□□ 0.35
PTCD3-220ENST00000627371 LHFPL3Q86UP9 236 aa17.21■□□□□ 0.35
PTCD3-220ENST00000627371 CATSPERDQ86XM0 798 aa17.21■□□□□ 0.35
PTCD3-220ENST00000627371 ELMOD2Q8IZ81 293 aa17.21■□□□□ 0.35
PTCD3-220ENST00000627371 CIARTQ8N365 385 aaPredicted RBP17.21■□□□□ 0.35
PTCD3-220ENST00000627371 CSNK2A3Q8NEV1 391 aa17.21■□□□□ 0.35
PTCD3-220ENST00000627371 ITFG2Q969R8 447 aa17.21■□□□□ 0.35
PTCD3-220ENST00000627371 PPP1R14AQ96A00 147 aa17.21■□□□□ 0.35
PTCD3-220ENST00000627371 COX4I2Q96KJ9 171 aa17.21■□□□□ 0.35
PTCD3-220ENST00000627371 OR2V2Q96R30 315 aa17.21■□□□□ 0.35
PTCD3-220ENST00000627371 ZNF649Q9BS31 505 aa17.21■□□□□ 0.35
PTCD3-220ENST00000627371 SOX7Q9BT81 388 aa17.21■□□□□ 0.35
PTCD3-220ENST00000627371 REG4Q9BYZ8 158 aa17.21■□□□□ 0.35
PTCD3-220ENST00000627371 ZNF275Q9NSD4 429 aaPredicted RBP17.21■□□□□ 0.35
PTCD3-220ENST00000627371 ERVK13-1Q9NX77 482 aa17.21■□□□□ 0.35
PTCD3-220ENST00000627371 ANKRD30BLA7E2S9 258 aa17.2■□□□□ 0.34
PTCD3-220ENST00000627371 RNF223E7ERA6 249 aa17.2■□□□□ 0.34
PTCD3-220ENST00000627371 CDC14BO60729 498 aa17.2■□□□□ 0.34
PTCD3-220ENST00000627371 TNFRSF1AP19438 455 aa17.2■□□□□ 0.34
PTCD3-220ENST00000627371 CA6P23280 308 aa17.2■□□□□ 0.34
PTCD3-220ENST00000627371 ACKR3P25106 362 aa17.2■□□□□ 0.34
PTCD3-220ENST00000627371 DCKP27707 260 aa17.2■□□□□ 0.34
PTCD3-220ENST00000627371 OR12D2P58182 307 aa17.2■□□□□ 0.34
PTCD3-220ENST00000627371 EGFL6Q8IUX8 553 aa17.2■□□□□ 0.34
PTCD3-220ENST00000627371 SYS1Q8N2H4 156 aa17.2■□□□□ 0.34
PTCD3-220ENST00000627371 FTMTQ8N4E7 242 aa17.2■□□□□ 0.34
PTCD3-220ENST00000627371 ZNF540Q8NDQ6 660 aa17.2■□□□□ 0.34
PTCD3-220ENST00000627371 OR51E1Q8TCB6 317 aa17.2■□□□□ 0.34
PTCD3-220ENST00000627371 ITLN1Q8WWA0 313 aa17.2■□□□□ 0.34
PTCD3-220ENST00000627371 MEGF10Q96KG7 1140 aa17.2■□□□□ 0.34
PTCD3-220ENST00000627371 C18orf12Q96KH6 178 aa17.2■□□□□ 0.34
PTCD3-220ENST00000627371 C4orf36Q96KX1 117 aa17.2■□□□□ 0.34
PTCD3-220ENST00000627371 ADAT1Q9BUB4 502 aaKnown RBP17.2■□□□□ 0.34
PTCD3-220ENST00000627371 ANKRD60Q9BZ19 345 aa17.2■□□□□ 0.34
PTCD3-220ENST00000627371 BPESC1Q9GZL8 116 aa17.2■□□□□ 0.34
PTCD3-220ENST00000627371 GPR84Q9NQS5 396 aa17.2■□□□□ 0.34
PTCD3-220ENST00000627371 A0A096LNT2 108 aa17.19■□□□□ 0.34
PTCD3-220ENST00000627371 F5H5P2 479 aa17.19■□□□□ 0.34
PTCD3-220ENST00000627371 GMDSO60547 372 aa17.19■□□□□ 0.34
PTCD3-220ENST00000627371 PIPP12273 146 aaPredicted RBP17.19■□□□□ 0.34
PTCD3-220ENST00000627371 ATP6V1B1P15313 513 aa17.19■□□□□ 0.34
PTCD3-220ENST00000627371 FOSL1P15407 271 aa17.19■□□□□ 0.34
PTCD3-220ENST00000627371 MYF6P23409 242 aa17.19■□□□□ 0.34
PTCD3-220ENST00000627371 NR4A2P43354 598 aa17.19■□□□□ 0.34
PTCD3-220ENST00000627371 SRP9P49458 86 aaKnown RBP17.19■□□□□ 0.34
PTCD3-220ENST00000627371 OR8G1Q15617 311 aa17.19■□□□□ 0.34
PTCD3-220ENST00000627371 HFEQ30201 348 aa17.19■□□□□ 0.34
PTCD3-220ENST00000627371 COMMD2Q86X83 199 aa17.19■□□□□ 0.34
PTCD3-220ENST00000627371 KLBQ86Z14 1044 aa17.19■□□□□ 0.34
PTCD3-220ENST00000627371 RNF166Q96A37 237 aaPredicted RBP17.19■□□□□ 0.34
PTCD3-220ENST00000627371 PELI1Q96FA3 418 aa17.19■□□□□ 0.34
PTCD3-220ENST00000627371 PLCXD1Q9NUJ7 323 aa17.19■□□□□ 0.34
PTCD3-220ENST00000627371 CNOT2Q9NZN8 540 aaKnown RBP17.19■□□□□ 0.34
PTCD3-220ENST00000627371 DIMT1Q9UNQ2 313 aaKnown RBP17.19■□□□□ 0.34
PTCD3-220ENST00000627371 SLC22A13Q9Y226 551 aa17.19■□□□□ 0.34
PTCD3-220ENST00000627371 CACNG2Q9Y698 323 aa17.19■□□□□ 0.34
PTCD3-220ENST00000627371 J3QLW9 94 aa17.18■□□□□ 0.34
PTCD3-220ENST00000627371 LIMS3P0CW19 117 aa17.18■□□□□ 0.34
PTCD3-220ENST00000627371 LIMS4P0CW20 117 aa17.18■□□□□ 0.34
PTCD3-220ENST00000627371 ZNF19P17023 458 aa17.18■□□□□ 0.34
PTCD3-220ENST00000627371 PSMB10P40306 273 aa17.18■□□□□ 0.34
PTCD3-220ENST00000627371 CD200P41217 278 aa17.18■□□□□ 0.34
PTCD3-220ENST00000627371 TMEM33P57088 247 aa17.18■□□□□ 0.34
PTCD3-220ENST00000627371 MAB21L1Q13394 359 aa17.18■□□□□ 0.34
PTCD3-220ENST00000627371 WDR38Q5JTN6 314 aa17.18■□□□□ 0.34
PTCD3-220ENST00000627371 FDX2Q6P4F2 183 aa17.18■□□□□ 0.34
PTCD3-220ENST00000627371 PRSS35Q8N3Z0 413 aa17.18■□□□□ 0.34
PTCD3-220ENST00000627371 CELF2-AS1Q8N7Q2 184 aa17.18■□□□□ 0.34
PTCD3-220ENST00000627371 GGHQ92820 318 aa17.18■□□□□ 0.34
PTCD3-220ENST00000627371 FAM71F1Q96KD3 344 aaPredicted RBP17.18■□□□□ 0.34
PTCD3-220ENST00000627371 EFCAB10A6NFE3 127 aa17.17■□□□□ 0.34
PTCD3-220ENST00000627371 XPNPEP2O43895 674 aa17.17■□□□□ 0.34
PTCD3-220ENST00000627371 MTRF1O75570 445 aaKnown RBP17.17■□□□□ 0.34
PTCD3-220ENST00000627371 DHRS3O75911 302 aa17.17■□□□□ 0.34
PTCD3-220ENST00000627371 GPR6P46095 362 aaPredicted RBP17.17■□□□□ 0.34
PTCD3-220ENST00000627371 MAP2K3P46734 347 aa17.17■□□□□ 0.34
PTCD3-220ENST00000627371 KRT74Q7RTS7 529 aa17.17■□□□□ 0.34
PTCD3-220ENST00000627371 SPERTQ8NA61 448 aa17.17■□□□□ 0.34
PTCD3-220ENST00000627371 PLPP7Q8NBV4 271 aa17.17■□□□□ 0.34
PTCD3-220ENST00000627371 BPIFB6Q8NFQ5 453 aa17.17■□□□□ 0.34
PTCD3-220ENST00000627371 SEMA6DQ8NFY4 1073 aa17.17■□□□□ 0.34
PTCD3-220ENST00000627371 OR2G2Q8NGZ5 317 aa17.17■□□□□ 0.34
PTCD3-220ENST00000627371 DVL3Q92997 716 aaPredicted RBP17.17■□□□□ 0.34
PTCD3-220ENST00000627371 TMEM80Q96HE8 168 aa17.17■□□□□ 0.34
PTCD3-220ENST00000627371 PAPOLGQ9BWT3 736 aaKnown RBP17.17■□□□□ 0.34
PTCD3-220ENST00000627371 ISG20L2Q9H9L3 353 aaKnown RBP17.17■□□□□ 0.34
PTCD3-220ENST00000627371 GCM1Q9NP62 436 aa17.17■□□□□ 0.34
PTCD3-220ENST00000627371 PSORS1C1Q9UIG5 152 aa17.17■□□□□ 0.34
PTCD3-220ENST00000627371 EXOSC1Q9Y3B2 195 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms