RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 BAZ2AQ9UIF9 1905 aaKnown RBP5.69□□□□□ -1.5
CDKL5-205ENST00000623535 SP1P08047 785 aa5.69□□□□□ -1.5
CDKL5-205ENST00000623535 LSM11P83369 360 aaKnown RBP eCLIP5.69□□□□□ -1.5
CDKL5-205ENST00000623535 BIRC8Q96P09 236 aa5.69□□□□□ -1.5
CDKL5-205ENST00000623535 ZMAT4Q9H898 229 aa5.69□□□□□ -1.5
CDKL5-205ENST00000623535 ICAM5Q9UMF0 924 aa5.69□□□□□ -1.5
CDKL5-205ENST00000623535 ABCA7Q8IZY2 2146 aa5.69□□□□□ -1.5
CDKL5-205ENST00000623535 CHRM2P08172 466 aa5.69□□□□□ -1.5
CDKL5-205ENST00000623535 OR13C7P0DN81 318 aa5.69□□□□□ -1.5
CDKL5-205ENST00000623535 COX5AP20674 150 aa5.69□□□□□ -1.5
CDKL5-205ENST00000623535 GIPRP48546 466 aa5.69□□□□□ -1.5
CDKL5-205ENST00000623535 ETFDHQ16134 617 aa5.69□□□□□ -1.5
CDKL5-205ENST00000623535 RNFT1Q5M7Z0 435 aa5.69□□□□□ -1.5
CDKL5-205ENST00000623535 SLC35D3Q5M8T2 416 aa5.69□□□□□ -1.5
CDKL5-205ENST00000623535 LYG1Q8N1E2 194 aa5.69□□□□□ -1.5
CDKL5-205ENST00000623535 BAHD1Q8TBE0 780 aaPredicted RBP5.69□□□□□ -1.5
CDKL5-205ENST00000623535 NSUN5Q96P11 429 aaKnown RBP5.69□□□□□ -1.5
CDKL5-205ENST00000623535 SUCNR1Q9BXA5 334 aa5.69□□□□□ -1.5
CDKL5-205ENST00000623535 PLA2G3Q9NZ20 509 aa5.69□□□□□ -1.5
CDKL5-205ENST00000623535 CACNA1EQ15878 2313 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 E5RGE8 158 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 ETV4P43268 484 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 PIGPP57054 158 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 EXOSC2Q13868 293 aaKnown RBP5.68□□□□□ -1.5
CDKL5-205ENST00000623535 RPEL1Q2QD12 228 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 MDP1Q86V88 176 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 NIPSNAP3BQ9BS92 247 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 PPLO60437 1756 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 ANKRD36CQ5JPF3 1778 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 F8W036 122 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 TFF2Q03403 129 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 ADIPOQQ15848 244 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 CPOQ8IVL8 374 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 OR51H1Q8NH63 302 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 AGAP11Q8TF27 550 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 PEBP4Q96S96 227 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 OR2J1Q9GZK6 312 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 OR52D1Q9H346 318 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 TMPRSS5Q9H3S3 457 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 KCNK15Q9H427 330 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 ANKRD26Q9UPS8 1709 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 POM121CA8CG34 1229 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 GATCO43716 136 aaKnown RBP5.68□□□□□ -1.5
CDKL5-205ENST00000623535 SCGB1D1O95968 90 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 OR2T7P0C7T2 308 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 RAB40BQ12829 278 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 Q3ZCU0 254 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 RNF141Q8WVD5 230 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 TMEM238LA0A1B0GVL6 79 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 A6NJY4 79 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 SLC25A6P12236 298 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 G6PCP35575 357 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 GNG10P50151 68 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 PDZK1IP1Q13113 114 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 TP53I3Q53FA7 332 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 DCXRQ7Z4W1 244 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 CTDSP1Q9GZU7 261 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 BET1LQ9NYM9 111 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 C15orf41Q9Y2V0 281 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 SPTBP11277 2137 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 GMPRP36959 345 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 TSPAN7P41732 249 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 RPL35P42766 123 aaKnown RBP5.68□□□□□ -1.5
CDKL5-205ENST00000623535 PSMB2P49721 201 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 AMIGO3Q86WK7 504 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 OR8I2Q8N0Y5 310 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 RPS10P5Q9NQ39 176 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 WASHC3Q9Y3C0 194 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 TRAV27A0A087WT01 109 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 GP1BAP07359 652 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 HOXB5P09067 269 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 MC5RP33032 325 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 WNT4P56705 351 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 REEP5Q00765 189 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 EVX2Q03828 476 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 WFDC3Q8IUB2 231 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 ZNF665Q9H7R5 613 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 ETV7Q9Y603 341 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 SNURFLB1AK76 121 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 RGS13O14921 159 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 MT-ND4LP03901 98 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 OR5AP2Q8NGF4 316 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 C8orf46Q8TAG6 207 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 ZNF707Q96C28 371 aaPredicted RBP5.68□□□□□ -1.5
CDKL5-205ENST00000623535 COL2A1P02458 1487 aaPredicted RBP5.68□□□□□ -1.5
CDKL5-205ENST00000623535 FRG2CA6NGY1 282 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 H0Y8X5 98 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 FUT7Q11130 342 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 CYB561A3Q8NBI2 242 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 DERL3Q96Q80 235 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 COQ4Q9Y3A0 265 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 ARHGEF17Q96PE2 2063 aaPredicted RBP5.68□□□□□ -1.5
CDKL5-205ENST00000623535 HEATR1Q9H583 2144 aaKnown RBP5.68□□□□□ -1.5
CDKL5-205ENST00000623535 AQP7P3A6NL99 342 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 TNFSF10P50591 281 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 NKX2-5P52952 324 aaPredicted RBP5.68□□□□□ -1.5
CDKL5-205ENST00000623535 C5AR2Q9P296 337 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 DOCK7Q96N67 2140 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 A0A0G2JLM5 398 aa5.68□□□□□ -1.5
CDKL5-205ENST00000623535 SOCS6O14544 535 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms