RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 NKAIN1Q4KMZ8 207 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 PRAMEF5Q5TYX0 476 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 PRAMEF6Q5VXH4 476 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 TMEM268Q5VZI3 342 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 OPN5Q6U736 354 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 SLC35F2Q8IXU6 374 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 ZDHHC22Q8N966 263 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 KLHDC9Q8NEP7 349 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 CMBLQ96DG6 245 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 ZNF587Q96SQ5 575 aaPredicted RBP7.09□□□□□ -1.27
VPS11-209ENST00000622309 KLHDC3Q9BQ90 382 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 NIPSNAP3BQ9BS92 247 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 SPXQ9BT56 116 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 HIPK2Q9H2X6 1198 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 MSL2Q9HCI7 577 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 FKBP11Q9NYL4 201 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 PLA2G2EQ9NZK7 142 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 NTNG1Q9Y2I2 539 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 YBX2Q9Y2T7 364 aaKnown RBP7.09□□□□□ -1.27
VPS11-209ENST00000622309 C5orf42Q9H799 3197 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 TRAV34A0A0B4J273 112 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 F5H5T6 163 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 BHLHE40O14503 412 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 RPP14O95059 124 aaKnown RBP7.09□□□□□ -1.27
VPS11-209ENST00000622309 F3P13726 295 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 ADRA2CP18825 462 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 FUT1P19526 365 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 PLA2G5P39877 138 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 GABRA4P48169 554 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 KHKP50053 298 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 CCR5P51681 352 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 PDX1P52945 283 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 FXYD6P3P58550 94 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 RPS24P62847 133 aaKnown RBP7.09□□□□□ -1.27
VPS11-209ENST00000622309 Q499Y3 187 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 CLLU1OSQ5K130 101 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 CNKSR3Q6P9H4 555 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 GDF7Q7Z4P5 450 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 ZNF429Q86V71 674 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 OR51L1Q8NGJ5 315 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 OR1L6Q8NGR2 347 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 OR2L2Q8NH16 312 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 OR51F2Q8NH61 342 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 CDX2Q99626 313 aaPredicted RBP7.09□□□□□ -1.27
VPS11-209ENST00000622309 SCRT1Q9BWW7 348 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 SLC2A4RGQ9NR83 387 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 TMEM140Q9NV12 185 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 SIDT1Q9NXL6 827 aaKnown RBP7.09□□□□□ -1.27
VPS11-209ENST00000622309 RAB22AQ9UL26 194 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 SLC5A6Q9Y289 635 aa7.09□□□□□ -1.27
VPS11-209ENST00000622309 KIR2DL5BA0A0G2JN68 375 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 KIR2DL5BA0A0G2JPC4 375 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 TLCD2A6NGC4 264 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 SLC38A8A6NNN8 435 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 FTCDNL1E5RQL4 147 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 K7EP13 123 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 TSPAN2O60636 221 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 ZFPL1O95159 310 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 IFNA6P05013 189 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 ZNF735P0CB33 412 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 TAF10Q12962 218 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 RAB32Q13637 225 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 OR8G2PQ6IF36 304 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 MED25Q71SY5 747 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 SLC35E3Q7Z769 313 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 ADIPOR2Q86V24 386 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 LRP11Q86VZ4 500 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 KIR2DL5AQ8N109 375 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 BHLHE23Q8NDY6 225 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 VWCEQ96DN2 955 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 DMRT3Q9NQL9 472 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 USP36Q9P275 1121 aaKnown RBP7.08□□□□□ -1.28
VPS11-209ENST00000622309 A0A1B0GW15 77 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 H0YL77 283 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 CCL25O15444 150 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 B4GALT2O60909 372 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 CLDN7O95471 211 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 LCATP04180 440 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 IL9P15248 144 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 CXCR1P25024 350 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 OR10J1P30954 320 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 FAM219AQ8IW50 185 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 ADAD2Q8NCV1 583 aaKnown RBP7.08□□□□□ -1.28
VPS11-209ENST00000622309 EAF1Q96JC9 268 aaPredicted RBP7.08□□□□□ -1.28
VPS11-209ENST00000622309 TPSD1Q9BZJ3 242 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 ARV1Q9H2C2 271 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 SMDT1Q9H4I9 107 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 BCL2L10Q9HD36 194 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 Q9N2J8 555 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 ZDHHC3Q9NYG2 299 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 FBXL17Q9UF56 701 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 SLC7A7Q9UM01 511 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 MEMO1Q9Y316 297 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 TET1Q8NFU7 2136 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 UNC80Q8N2C7 3258 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 BORCS7-ASMTA0A0B4J1R7 106 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 LEFTY2O00292 366 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 OR2J2O76002 312 aa7.08□□□□□ -1.28
VPS11-209ENST00000622309 GAPDHP04406 335 aaKnown RBP7.08□□□□□ -1.28
VPS11-209ENST00000622309 DANCRP0C864 163 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms