RNA–Protein interactions for RNA: ENST00000621747.5

VEGFA-229, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-229ENST00000621747 PGAM5Q96HS1 289 aa21.06■□□□□ 0.96
VEGFA-229ENST00000621747 AMELYQ99218 206 aa21.06■□□□□ 0.96
VEGFA-229ENST00000621747 SLC25A19Q9HC21 320 aa21.06■□□□□ 0.96
VEGFA-229ENST00000621747 PHYHO14832 338 aa21.05■□□□□ 0.96
VEGFA-229ENST00000621747 SELENOFO60613 162 aa21.05■□□□□ 0.96
VEGFA-229ENST00000621747 GRPP07492 148 aa21.05■□□□□ 0.96
VEGFA-229ENST00000621747 RPS7P62081 194 aaKnown RBP21.05■□□□□ 0.96
VEGFA-229ENST00000621747 PAX2Q02962 417 aa21.05■□□□□ 0.96
VEGFA-229ENST00000621747 SNCBQ16143 134 aa21.05■□□□□ 0.96
VEGFA-229ENST00000621747 C12orf54Q6X4T0 127 aa21.05■□□□□ 0.96
VEGFA-229ENST00000621747 RBMS3Q6XE24 437 aaKnown RBP21.05■□□□□ 0.96
VEGFA-229ENST00000621747 PRSS45Q7RTY3 260 aa21.05■□□□□ 0.96
VEGFA-229ENST00000621747 C19orf18Q8NEA5 215 aa21.05■□□□□ 0.96
VEGFA-229ENST00000621747 THEM6Q8WUY1 208 aa21.05■□□□□ 0.96
VEGFA-229ENST00000621747 CADM1Q9BY67 442 aaKnown RBP21.05■□□□□ 0.96
VEGFA-229ENST00000621747 RGCCQ9H4X1 137 aa21.05■□□□□ 0.96
VEGFA-229ENST00000621747 PAPOLBQ9NRJ5 636 aaKnown RBP21.05■□□□□ 0.96
VEGFA-229ENST00000621747 C1orf123Q9NWV4 160 aa21.05■□□□□ 0.96
VEGFA-229ENST00000621747 WNK2Q9Y3S1 2297 aa21.04■□□□□ 0.96
VEGFA-229ENST00000621747 A6NLC8 198 aa21.04■□□□□ 0.96
VEGFA-229ENST00000621747 LGALS8O00214 317 aa21.04■□□□□ 0.96
VEGFA-229ENST00000621747 PPIAL4GP0DN37 164 aa21.04■□□□□ 0.96
VEGFA-229ENST00000621747 CD80P33681 288 aa21.04■□□□□ 0.96
VEGFA-229ENST00000621747 BNIP1Q12981 228 aa21.04■□□□□ 0.96
VEGFA-229ENST00000621747 GFOD2Q3B7J2 385 aa21.04■□□□□ 0.96
VEGFA-229ENST00000621747 TMEM236Q5W0B7 351 aa21.04■□□□□ 0.96
VEGFA-229ENST00000621747 LYPD2Q6UXB3 125 aa21.04■□□□□ 0.96
VEGFA-229ENST00000621747 BOLLQ8N9W6 283 aaKnown RBP21.04■□□□□ 0.96
VEGFA-229ENST00000621747 MMADHCQ9H3L0 296 aaPredicted RBP21.04■□□□□ 0.96
VEGFA-229ENST00000621747 BRD7Q9NPI1 651 aa21.04■□□□□ 0.96
VEGFA-229ENST00000621747 FBN3Q75N90 2809 aa21.03■□□□□ 0.96
VEGFA-229ENST00000621747 TRAV38-1A0A0B4J264 116 aa21.03■□□□□ 0.96
VEGFA-229ENST00000621747 hCG_38984A0A1B0GV85 526 aa21.03■□□□□ 0.96
VEGFA-229ENST00000621747 hCG_1807616A0A1W2PRN6 198 aa21.03■□□□□ 0.96
VEGFA-229ENST00000621747 TIPRLO75663 272 aa21.03■□□□□ 0.96
VEGFA-229ENST00000621747 PSMB10P40306 273 aa21.03■□□□□ 0.96
VEGFA-229ENST00000621747 NAA10P41227 235 aaPredicted RBP21.03■□□□□ 0.96
VEGFA-229ENST00000621747 NPY4RP50391 375 aa21.03■□□□□ 0.96
VEGFA-229ENST00000621747 RASSF2P50749 326 aa21.03■□□□□ 0.96
VEGFA-229ENST00000621747 OR8B8Q15620 311 aa21.03■□□□□ 0.96
VEGFA-229ENST00000621747 SNAPC1Q16533 368 aa21.03■□□□□ 0.96
VEGFA-229ENST00000621747 KLF17Q5JT82 389 aaPredicted RBP21.03■□□□□ 0.96
VEGFA-229ENST00000621747 WDR25Q64LD2 544 aaPredicted RBP21.03■□□□□ 0.96
VEGFA-229ENST00000621747 SFRP4Q6FHJ7 346 aaPredicted RBP21.03■□□□□ 0.96
VEGFA-229ENST00000621747 FTMTQ8N4E7 242 aa21.03■□□□□ 0.96
VEGFA-229ENST00000621747 CSNK2A3Q8NEV1 391 aa21.03■□□□□ 0.96
VEGFA-229ENST00000621747 BBS1Q8NFJ9 593 aa21.03■□□□□ 0.96
VEGFA-229ENST00000621747 OOEPA6NGQ2 149 aa21.02■□□□□ 0.96
VEGFA-229ENST00000621747 C3orf80F5H4A9 247 aa21.02■□□□□ 0.96
VEGFA-229ENST00000621747 NDUFA2O43678 99 aa21.02■□□□□ 0.96
VEGFA-229ENST00000621747 GNALP38405 381 aa21.02■□□□□ 0.96
VEGFA-229ENST00000621747 GSK3AP49840 483 aa21.02■□□□□ 0.96
VEGFA-229ENST00000621747 CRISP1P54107 249 aa21.02■□□□□ 0.96
VEGFA-229ENST00000621747 UTP4Q969X6 686 aaKnown RBP21.02■□□□□ 0.96
VEGFA-229ENST00000621747 DACT3Q96B18 629 aaPredicted RBP21.02■□□□□ 0.96
VEGFA-229ENST00000621747 NUDT16L1Q9BRJ7 211 aaKnown RBP21.02■□□□□ 0.96
VEGFA-229ENST00000621747 NIPAL2Q9H841 368 aa21.02■□□□□ 0.96
VEGFA-229ENST00000621747 TVP23BQ9NYZ1 205 aa21.02■□□□□ 0.96
VEGFA-229ENST00000621747 ERVK-18Q9QC07 812 aa21.02■□□□□ 0.96
VEGFA-229ENST00000621747 ZNF69Q9UC07 566 aa21.02■□□□□ 0.96
VEGFA-229ENST00000621747 LAMP5Q9UJQ1 280 aa21.02■□□□□ 0.96
VEGFA-229ENST00000621747 KIR2DS1A0A191URI9 304 aa21.01■□□□□ 0.95
VEGFA-229ENST00000621747 SLC2A5P22732 501 aa21.01■□□□□ 0.95
VEGFA-229ENST00000621747 APOFQ13790 326 aa21.01■□□□□ 0.95
VEGFA-229ENST00000621747 FAHD1Q6P587 224 aa21.01■□□□□ 0.95
VEGFA-229ENST00000621747 ZNF841Q6ZN19 808 aa21.01■□□□□ 0.95
VEGFA-229ENST00000621747 PARP8Q8N3A8 854 aa21.01■□□□□ 0.95
VEGFA-229ENST00000621747 ZDHHC22Q8N966 263 aa21.01■□□□□ 0.95
VEGFA-229ENST00000621747 OR5K1Q8NHB7 308 aa21.01■□□□□ 0.95
VEGFA-229ENST00000621747 TECTBQ96PL2 329 aa21.01■□□□□ 0.95
VEGFA-229ENST00000621747 PRRG3Q9BZD7 231 aa21.01■□□□□ 0.95
VEGFA-229ENST00000621747 ESM1Q9NQ30 184 aa21.01■□□□□ 0.95
VEGFA-229ENST00000621747 ZNF319Q9P2F9 582 aa21.01■□□□□ 0.95
VEGFA-229ENST00000621747 ATP5HO75947 161 aa21■□□□□ 0.95
VEGFA-229ENST00000621747 DAPP51397 102 aa21■□□□□ 0.95
VEGFA-229ENST00000621747 HOXA4Q00056 320 aaPredicted RBP21■□□□□ 0.95
VEGFA-229ENST00000621747 LCN1P1Q5VSP4 162 aa21■□□□□ 0.95
VEGFA-229ENST00000621747 CD276Q5ZPR3 534 aa21■□□□□ 0.95
VEGFA-229ENST00000621747 ZNF826PQ6ZT77 177 aa21■□□□□ 0.95
VEGFA-229ENST00000621747 DOK3Q7L591 496 aa21■□□□□ 0.95
VEGFA-229ENST00000621747 SIGLECL1Q8N7X8 197 aa21■□□□□ 0.95
VEGFA-229ENST00000621747 GCDHQ92947 438 aaPredicted RBP21■□□□□ 0.95
VEGFA-229ENST00000621747 UPRTQ96BW1 309 aa21■□□□□ 0.95
VEGFA-229ENST00000621747 PAPOLGQ9BWT3 736 aaKnown RBP21■□□□□ 0.95
VEGFA-229ENST00000621747 YIPF3Q9GZM5 350 aa21■□□□□ 0.95
VEGFA-229ENST00000621747 MS4A7Q9GZW8 240 aaPredicted RBP21■□□□□ 0.95
VEGFA-229ENST00000621747 ZNF391Q9UJN7 358 aa21■□□□□ 0.95
VEGFA-229ENST00000621747 ADAM20O43506 726 aa20.99■□□□□ 0.95
VEGFA-229ENST00000621747 ENSAO43768 121 aaKnown RBP20.99■□□□□ 0.95
VEGFA-229ENST00000621747 PSMA6P60900 246 aaKnown RBP20.99■□□□□ 0.95
VEGFA-229ENST00000621747 ESRRGP62508 458 aa20.99■□□□□ 0.95
VEGFA-229ENST00000621747 UBA52P62987 128 aaKnown RBP20.99■□□□□ 0.95
VEGFA-229ENST00000621747 TUSC1Q2TAM9 212 aa20.99■□□□□ 0.95
VEGFA-229ENST00000621747 KRT77Q7Z794 578 aa20.99■□□□□ 0.95
VEGFA-229ENST00000621747 GCSAMQ8N6F7 178 aa20.99■□□□□ 0.95
VEGFA-229ENST00000621747 RNPEPL1Q9HAU8 725 aa20.99■□□□□ 0.95
VEGFA-229ENST00000621747 ABCB9Q9NP78 766 aa20.99■□□□□ 0.95
VEGFA-229ENST00000621747 KLHDC2Q9Y2U9 406 aa20.99■□□□□ 0.95
VEGFA-229ENST00000621747 LRP12Q9Y561 859 aa20.99■□□□□ 0.95
VEGFA-229ENST00000621747 TMEM89A2RUT3 159 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms