RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-223ENST00000620632 FOSL1P15407 271 aa9.12□□□□□ -0.95
TARDBP-223ENST00000620632 PSMB10P40306 273 aa9.12□□□□□ -0.95
TARDBP-223ENST00000620632 PMELP40967 661 aa9.12□□□□□ -0.95
TARDBP-223ENST00000620632 OR12D2P58182 307 aa9.12□□□□□ -0.95
TARDBP-223ENST00000620632 HOXA4Q00056 320 aaPredicted RBP9.12□□□□□ -0.95
TARDBP-223ENST00000620632 MVKQ03426 396 aa9.12□□□□□ -0.95
TARDBP-223ENST00000620632 IL18R1Q13478 541 aa9.12□□□□□ -0.95
TARDBP-223ENST00000620632 RIPK1Q13546 671 aa9.12□□□□□ -0.95
TARDBP-223ENST00000620632 ZNF829Q3KNS6 432 aaPredicted RBP9.12□□□□□ -0.95
TARDBP-223ENST00000620632 CDONQ4KMG0 1287 aa9.12□□□□□ -0.95
TARDBP-223ENST00000620632 AVPI1Q5T686 147 aa9.12□□□□□ -0.95
TARDBP-223ENST00000620632 PRAMEF6Q5VXH4 476 aa9.12□□□□□ -0.95
TARDBP-223ENST00000620632 LHFPL3Q86UP9 236 aa9.12□□□□□ -0.95
TARDBP-223ENST00000620632 CATSPERDQ86XM0 798 aa9.12□□□□□ -0.95
TARDBP-223ENST00000620632 PRSS35Q8N3Z0 413 aa9.12□□□□□ -0.95
TARDBP-223ENST00000620632 ACBD7Q8N6N7 88 aa9.12□□□□□ -0.95
TARDBP-223ENST00000620632 YIPF7Q8N8F6 280 aa9.12□□□□□ -0.95
TARDBP-223ENST00000620632 ZNF420Q8TAQ5 688 aaPredicted RBP9.12□□□□□ -0.95
TARDBP-223ENST00000620632 OR51E1Q8TCB6 317 aa9.12□□□□□ -0.95
TARDBP-223ENST00000620632 Q96MT0 163 aa9.12□□□□□ -0.95
TARDBP-223ENST00000620632 ADAT1Q9BUB4 502 aaKnown RBP9.12□□□□□ -0.95
TARDBP-223ENST00000620632 FGF23Q9GZV9 251 aaPredicted RBP9.12□□□□□ -0.95
TARDBP-223ENST00000620632 SP140LQ9H930 580 aa9.12□□□□□ -0.95
TARDBP-223ENST00000620632 GPR84Q9NQS5 396 aa9.12□□□□□ -0.95
TARDBP-223ENST00000620632 MRPL15Q9P015 296 aaKnown RBP9.12□□□□□ -0.95
TARDBP-223ENST00000620632 IL19Q9UHD0 177 aa9.12□□□□□ -0.95
TARDBP-223ENST00000620632 GNG8Q9UK08 70 aa9.12□□□□□ -0.95
TARDBP-223ENST00000620632 OR52A1Q9UKL2 312 aa9.12□□□□□ -0.95
TARDBP-223ENST00000620632 RHBDD3Q9Y3P4 386 aa9.12□□□□□ -0.95
TARDBP-223ENST00000620632 TLN2Q9Y4G6 2542 aa9.12□□□□□ -0.95
TARDBP-223ENST00000620632 ARHGAP32A7KAX9 2087 aa9.12□□□□□ -0.95
TARDBP-223ENST00000620632 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.11□□□□□ -0.958e-12■■■■■ 45.2
TARDBP-223ENST00000620632 A0A0U1RQV5 110 aa9.11□□□□□ -0.95
TARDBP-223ENST00000620632 A0A1B0GTI1 187 aa9.11□□□□□ -0.95
TARDBP-223ENST00000620632 DAPL1A0PJW8 107 aa9.11□□□□□ -0.95
TARDBP-223ENST00000620632 ACOD1A6NK06 481 aa9.11□□□□□ -0.95
TARDBP-223ENST00000620632 SNTNA6NMZ2 147 aa9.11□□□□□ -0.95
TARDBP-223ENST00000620632 FAM20BO75063 409 aa9.11□□□□□ -0.95
TARDBP-223ENST00000620632 LY6G6DO95868 133 aa9.11□□□□□ -0.95
TARDBP-223ENST00000620632 TACSTD2P09758 323 aa9.11□□□□□ -0.95
TARDBP-223ENST00000620632 USF1P22415 310 aaPredicted RBP9.11□□□□□ -0.95
TARDBP-223ENST00000620632 CD200P41217 278 aa9.11□□□□□ -0.95
TARDBP-223ENST00000620632 KIR3DL2P43630 455 aa9.11□□□□□ -0.95
TARDBP-223ENST00000620632 GPR6P46095 362 aaPredicted RBP9.11□□□□□ -0.95
TARDBP-223ENST00000620632 NANOS3P60323 173 aaKnown RBP9.11□□□□□ -0.95
TARDBP-223ENST00000620632 ACTC1P68032 377 aa9.11□□□□□ -0.95
TARDBP-223ENST00000620632 ACTA1P68133 377 aa9.11□□□□□ -0.95
TARDBP-223ENST00000620632 LOXL1Q08397 574 aaPredicted RBP9.11□□□□□ -0.95
TARDBP-223ENST00000620632 RAB40BQ12829 278 aa9.11□□□□□ -0.95
TARDBP-223ENST00000620632 OR8G1Q15617 311 aa9.11□□□□□ -0.95
TARDBP-223ENST00000620632 MPPED2Q15777 294 aa9.11□□□□□ -0.95
TARDBP-223ENST00000620632 WDR38Q5JTN6 314 aa9.11□□□□□ -0.95
TARDBP-223ENST00000620632 Q71RC1 249 aaPredicted RBP9.11□□□□□ -0.95
TARDBP-223ENST00000620632 WDR86Q86TI4 376 aa9.11□□□□□ -0.95
TARDBP-223ENST00000620632 ELMOD2Q8IZ81 293 aa9.11□□□□□ -0.95
TARDBP-223ENST00000620632 C8orf59Q8N0T1 100 aaPredicted RBP9.11□□□□□ -0.95
TARDBP-223ENST00000620632 SETD9Q8NE22 299 aa9.11□□□□□ -0.95
TARDBP-223ENST00000620632 CCL17Q92583 94 aa9.11□□□□□ -0.95
TARDBP-223ENST00000620632 FAM71F1Q96KD3 344 aaPredicted RBP9.11□□□□□ -0.95
TARDBP-223ENST00000620632 C4orf36Q96KX1 117 aa9.11□□□□□ -0.95
TARDBP-223ENST00000620632 ALG8Q9BVK2 526 aa9.11□□□□□ -0.95
TARDBP-223ENST00000620632 EGLN1Q9GZT9 426 aa9.11□□□□□ -0.95
TARDBP-223ENST00000620632 VCXQ9H320 206 aa9.11□□□□□ -0.95
TARDBP-223ENST00000620632 RGCCQ9H4X1 137 aa9.11□□□□□ -0.95
TARDBP-223ENST00000620632 NARFLQ9H6Q4 476 aa9.11□□□□□ -0.95
TARDBP-223ENST00000620632 ISG20L2Q9H9L3 353 aaKnown RBP9.11□□□□□ -0.95
TARDBP-223ENST00000620632 GCM1Q9NP62 436 aa9.11□□□□□ -0.95
TARDBP-223ENST00000620632 FGF20Q9NP95 211 aaPredicted RBP9.11□□□□□ -0.95
TARDBP-223ENST00000620632 ERVK13-1Q9NX77 482 aa9.11□□□□□ -0.95
TARDBP-223ENST00000620632 GTF2A1LQ9UNN4 478 aa9.11□□□□□ -0.95
TARDBP-223ENST00000620632 RRP15Q9Y3B9 282 aaKnown RBP9.11□□□□□ -0.95
TARDBP-223ENST00000620632 RPL36Q9Y3U8 105 aaKnown RBP9.11□□□□□ -0.95
TARDBP-223ENST00000620632 HSPE1-MOB4S4R3N1 261 aa9.11□□□□□ -0.95
TARDBP-223ENST00000620632 SVEP1Q4LDE5 3571 aa9.1□□□□□ -0.95
TARDBP-223ENST00000620632 H0YJX3 145 aa9.1□□□□□ -0.95
TARDBP-223ENST00000620632 H3BSH0 61 aa9.1□□□□□ -0.95
TARDBP-223ENST00000620632 P2RY10O00398 339 aa9.1□□□□□ -0.95
TARDBP-223ENST00000620632 PPIHO43447 177 aaKnown RBP9.1□□□□□ -0.95
TARDBP-223ENST00000620632 XPNPEP2O43895 674 aa9.1□□□□□ -0.95
TARDBP-223ENST00000620632 LMX1BO60663 402 aa9.1□□□□□ -0.95
TARDBP-223ENST00000620632 LIMS3P0CW19 117 aa9.1□□□□□ -0.95
TARDBP-223ENST00000620632 LIMS4P0CW20 117 aa9.1□□□□□ -0.95
TARDBP-223ENST00000620632 TNFSF4P23510 183 aa9.1□□□□□ -0.95
TARDBP-223ENST00000620632 CFL1P23528 166 aaKnown RBP9.1□□□□□ -0.95
TARDBP-223ENST00000620632 DDOSTP39656 456 aa9.1□□□□□ -0.95
TARDBP-223ENST00000620632 ETV1P50549 477 aa9.1□□□□□ -0.95
TARDBP-223ENST00000620632 DOC2BQ14184 412 aa9.1□□□□□ -0.95
TARDBP-223ENST00000620632 GALEQ14376 348 aa9.1□□□□□ -0.95
TARDBP-223ENST00000620632 ODF4Q2M2E3 257 aa9.1□□□□□ -0.95
TARDBP-223ENST00000620632 TMEM249Q2WGJ8 235 aa9.1□□□□□ -0.95
TARDBP-223ENST00000620632 HFEQ30201 348 aa9.1□□□□□ -0.95
TARDBP-223ENST00000620632 DMRTC1Q5HYR2 192 aa9.1□□□□□ -0.95
TARDBP-223ENST00000620632 BCL2L15Q5TBC7 163 aa9.1□□□□□ -0.95
TARDBP-223ENST00000620632 IZUMO2Q6UXV1 221 aa9.1□□□□□ -0.95
TARDBP-223ENST00000620632 Q6ZSR3 168 aa9.1□□□□□ -0.95
TARDBP-223ENST00000620632 MOGAT3Q86VF5 341 aa9.1□□□□□ -0.95
TARDBP-223ENST00000620632 PLPP7Q8NBV4 271 aa9.1□□□□□ -0.95
TARDBP-223ENST00000620632 CLDND2Q8NHS1 167 aa9.1□□□□□ -0.95
TARDBP-223ENST00000620632 HPSE2Q8WWQ2 592 aa9.1□□□□□ -0.95
TARDBP-223ENST00000620632 PELI1Q96FA3 418 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms