RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 DNAJC8O75937 253 aaPredicted RBP14.3□□□□□ -0.12
HMGN3-203ENST00000620514 H2BFMP0C1H6 154 aa14.3□□□□□ -0.12
HMGN3-203ENST00000620514 IGHV4-38-2P0DP08 117 aa14.3□□□□□ -0.12
HMGN3-203ENST00000620514 UBA52P62987 128 aaKnown RBP14.3□□□□□ -0.12
HMGN3-203ENST00000620514 GFOD2Q3B7J2 385 aa14.3□□□□□ -0.12
HMGN3-203ENST00000620514 KLHL12Q53G59 568 aa14.3□□□□□ -0.12
HMGN3-203ENST00000620514 BTNL3Q6UXE8 466 aa14.3□□□□□ -0.12
HMGN3-203ENST00000620514 LRRN1Q6UXK5 716 aa14.3□□□□□ -0.12
HMGN3-203ENST00000620514 WDR86Q86TI4 376 aa14.3□□□□□ -0.12
HMGN3-203ENST00000620514 SPERTQ8NA61 448 aa14.3□□□□□ -0.12
HMGN3-203ENST00000620514 PAPD5Q8NDF8 572 aaKnown RBP14.3□□□□□ -0.12
HMGN3-203ENST00000620514 ZNF48Q96MX3 618 aaPredicted RBP14.3□□□□□ -0.12
HMGN3-203ENST00000620514 MMADHCQ9H3L0 296 aaPredicted RBP14.3□□□□□ -0.12
HMGN3-203ENST00000620514 NTN4Q9HB63 628 aa14.3□□□□□ -0.12
HMGN3-203ENST00000620514 CLN8Q9UBY8 286 aa14.3□□□□□ -0.12
HMGN3-203ENST00000620514 KLHDC2Q9Y2U9 406 aa14.3□□□□□ -0.12
HMGN3-203ENST00000620514 KIR2DS1A0A191URI9 304 aa14.29□□□□□ -0.12
HMGN3-203ENST00000620514 TMEM89A2RUT3 159 aa14.29□□□□□ -0.12
HMGN3-203ENST00000620514 ANKRD30BLA7E2S9 258 aa14.29□□□□□ -0.12
HMGN3-203ENST00000620514 C22orf46C9J442 243 aa14.29□□□□□ -0.12
HMGN3-203ENST00000620514 HMGN1P05114 100 aa14.29□□□□□ -0.12
HMGN3-203ENST00000620514 ANXA8P13928 327 aa14.29□□□□□ -0.12
HMGN3-203ENST00000620514 HOXB6P17509 224 aaKnown RBP14.29□□□□□ -0.12
HMGN3-203ENST00000620514 CFPP27918 469 aa14.29□□□□□ -0.12
HMGN3-203ENST00000620514 DDOSTP39656 456 aa14.29□□□□□ -0.12
HMGN3-203ENST00000620514 PSMB10P40306 273 aa14.29□□□□□ -0.12
HMGN3-203ENST00000620514 NAA10P41227 235 aaPredicted RBP14.29□□□□□ -0.12
HMGN3-203ENST00000620514 OR8B8Q15620 311 aa14.29□□□□□ -0.12
HMGN3-203ENST00000620514 DOK3Q7L591 496 aa14.29□□□□□ -0.12
HMGN3-203ENST00000620514 GCSAMQ8N6F7 178 aa14.29□□□□□ -0.12
HMGN3-203ENST00000620514 PLPP7Q8NBV4 271 aa14.29□□□□□ -0.12
HMGN3-203ENST00000620514 OTOSQ8NHW6 89 aa14.29□□□□□ -0.12
HMGN3-203ENST00000620514 THEM6Q8WUY1 208 aa14.29□□□□□ -0.12
HMGN3-203ENST00000620514 GCDHQ92947 438 aaPredicted RBP14.29□□□□□ -0.12
HMGN3-203ENST00000620514 PGAM5Q96HS1 289 aa14.29□□□□□ -0.12
HMGN3-203ENST00000620514 DUX5Q96PT3 197 aa14.29□□□□□ -0.12
HMGN3-203ENST00000620514 NUDT16L1Q9BRJ7 211 aaKnown RBP14.29□□□□□ -0.12
HMGN3-203ENST00000620514 CADM1Q9BY67 442 aaKnown RBP14.29□□□□□ -0.12
HMGN3-203ENST00000620514 YY1AP1Q9H869 796 aa14.29□□□□□ -0.12
HMGN3-203ENST00000620514 DOCK11Q5JSL3 2073 aa14.29□□□□□ -0.12
HMGN3-203ENST00000620514 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.28□□□□□ -0.12
HMGN3-203ENST00000620514 PHYHO14832 338 aa14.28□□□□□ -0.12
HMGN3-203ENST00000620514 TNFRSF13BO14836 293 aaPredicted RBP14.28□□□□□ -0.12
HMGN3-203ENST00000620514 GSC2O15499 205 aa14.28□□□□□ -0.12
HMGN3-203ENST00000620514 TIPRLO75663 272 aa14.28□□□□□ -0.12
HMGN3-203ENST00000620514 APOC1P02654 83 aa14.28□□□□□ -0.12
HMGN3-203ENST00000620514 LYNP07948 512 aa14.28□□□□□ -0.12
HMGN3-203ENST00000620514 EGR1P18146 543 aa14.28□□□□□ -0.12
HMGN3-203ENST00000620514 GSK3AP49840 483 aa14.28□□□□□ -0.12
HMGN3-203ENST00000620514 POU4F2Q12837 409 aa14.28□□□□□ -0.12
HMGN3-203ENST00000620514 C11orf53Q8IXP5 236 aa14.28□□□□□ -0.12
HMGN3-203ENST00000620514 PARP8Q8N3A8 854 aa14.28□□□□□ -0.12
HMGN3-203ENST00000620514 OR8S1Q8NH09 359 aa14.28□□□□□ -0.12
HMGN3-203ENST00000620514 UPRTQ96BW1 309 aa14.28□□□□□ -0.12
HMGN3-203ENST00000620514 TECTBQ96PL2 329 aa14.28□□□□□ -0.12
HMGN3-203ENST00000620514 OR10A2Q9H208 303 aa14.28□□□□□ -0.12
HMGN3-203ENST00000620514 RASSF4Q9H2L5 321 aa14.28□□□□□ -0.12
HMGN3-203ENST00000620514 SP140LQ9H930 580 aa14.28□□□□□ -0.12
HMGN3-203ENST00000620514 SLC25A19Q9HC21 320 aa14.28□□□□□ -0.12
HMGN3-203ENST00000620514 C14orf119Q9NWQ9 140 aa14.28□□□□□ -0.12
HMGN3-203ENST00000620514 RHBDD3Q9Y3P4 386 aa14.28□□□□□ -0.12
HMGN3-203ENST00000620514 TENM1Q9UKZ4 2725 aa14.28□□□□□ -0.12
HMGN3-203ENST00000620514 IGHV3OR15-7A0A075B7D8 119 aa14.27□□□□□ -0.13
HMGN3-203ENST00000620514 TRAV40A0A0B4J280 105 aa14.27□□□□□ -0.13
HMGN3-203ENST00000620514 hCG_1807616A0A1W2PRN6 198 aa14.27□□□□□ -0.13
HMGN3-203ENST00000620514 OOEPA6NGQ2 149 aa14.27□□□□□ -0.13
HMGN3-203ENST00000620514 PRODHO43272 600 aa14.27□□□□□ -0.13
HMGN3-203ENST00000620514 ADAM20O43506 726 aa14.27□□□□□ -0.13
HMGN3-203ENST00000620514 GYPAP02724 150 aa14.27□□□□□ -0.13
HMGN3-203ENST00000620514 PPIAL4GP0DN37 164 aa14.27□□□□□ -0.13
HMGN3-203ENST00000620514 SLC2A5P22732 501 aa14.27□□□□□ -0.13
HMGN3-203ENST00000620514 COMPP49747 757 aaPredicted RBP14.27□□□□□ -0.13
HMGN3-203ENST00000620514 HCCSP53701 268 aa14.27□□□□□ -0.13
HMGN3-203ENST00000620514 RPS7P62081 194 aaKnown RBP14.27□□□□□ -0.13
HMGN3-203ENST00000620514 CSNK2BP67870 215 aa14.27□□□□□ -0.13
HMGN3-203ENST00000620514 RBMS3Q6XE24 437 aaKnown RBP14.27□□□□□ -0.13
HMGN3-203ENST00000620514 RHOUQ7L0Q8 258 aa14.27□□□□□ -0.13
HMGN3-203ENST00000620514 FAM90A1Q86YD7 464 aa14.27□□□□□ -0.13
HMGN3-203ENST00000620514 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.27□□□□□ -0.13
HMGN3-203ENST00000620514 ZNF454Q8N9F8 522 aa14.27□□□□□ -0.13
HMGN3-203ENST00000620514 OR52H1Q8NGJ2 320 aa14.27□□□□□ -0.13
HMGN3-203ENST00000620514 C1orf147Q96MC9 270 aaPredicted RBP14.27□□□□□ -0.13
HMGN3-203ENST00000620514 MS4A7Q9GZW8 240 aaPredicted RBP14.27□□□□□ -0.13
HMGN3-203ENST00000620514 TVP23BQ9NYZ1 205 aa14.27□□□□□ -0.13
HMGN3-203ENST00000620514 TRAV38-1A0A0B4J264 116 aa14.26□□□□□ -0.13
HMGN3-203ENST00000620514 DNAJC9-AS1A6NH13 148 aa14.26□□□□□ -0.13
HMGN3-203ENST00000620514 FCN3O75636 299 aa14.26□□□□□ -0.13
HMGN3-203ENST00000620514 PLATP00750 562 aa14.26□□□□□ -0.13
HMGN3-203ENST00000620514 LHBP01229 141 aa14.26□□□□□ -0.13
HMGN3-203ENST00000620514 DAPP51397 102 aa14.26□□□□□ -0.13
HMGN3-203ENST00000620514 CRISP1P54107 249 aa14.26□□□□□ -0.13
HMGN3-203ENST00000620514 FGF12P61328 243 aa14.26□□□□□ -0.13
HMGN3-203ENST00000620514 ELF3P78545 371 aaPredicted RBP14.26□□□□□ -0.13
HMGN3-203ENST00000620514 MZT1Q08AG7 82 aa14.26□□□□□ -0.13
HMGN3-203ENST00000620514 BNIP1Q12981 228 aa14.26□□□□□ -0.13
HMGN3-203ENST00000620514 APOFQ13790 326 aa14.26□□□□□ -0.13
HMGN3-203ENST00000620514 KCNJ8Q15842 424 aa14.26□□□□□ -0.13
HMGN3-203ENST00000620514 SLC35D3Q5M8T2 416 aa14.26□□□□□ -0.13
HMGN3-203ENST00000620514 OR1M1Q8NGA1 313 aa14.26□□□□□ -0.13
HMGN3-203ENST00000620514 LRRC29Q8WV35 223 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms