RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 TMPPEQ6ZT21 453 aa15.21■□□□□ 0.02
NEK3-206ENST00000611833 BVESQ8NE79 360 aa15.21■□□□□ 0.02
NEK3-206ENST00000611833 THAP6Q8TBB0 222 aa15.21■□□□□ 0.02
NEK3-206ENST00000611833 MARCH1Q8TCQ1 289 aa15.21■□□□□ 0.02
NEK3-206ENST00000611833 DUX4Q9UBX2 424 aa15.21■□□□□ 0.02
NEK3-206ENST00000611833 TRIOBPQ9H2D6 2365 aa15.2■□□□□ 0.02
NEK3-206ENST00000611833 D6RAR5 112 aa15.2■□□□□ 0.02
NEK3-206ENST00000611833 HPP00738 406 aa15.2■□□□□ 0.02
NEK3-206ENST00000611833 FGF2P09038 288 aa15.2■□□□□ 0.02
NEK3-206ENST00000611833 GSTP1P09211 210 aaKnown RBP15.2■□□□□ 0.02
NEK3-206ENST00000611833 PLAC9Q5JTB6 97 aa15.2■□□□□ 0.02
NEK3-206ENST00000611833 JMJD6Q6NYC1 403 aaPredicted RBP15.2■□□□□ 0.02
NEK3-206ENST00000611833 OVCH2Q7RTZ1 564 aa15.2■□□□□ 0.02
NEK3-206ENST00000611833 HSD17B13Q7Z5P4 300 aaPredicted RBP15.2■□□□□ 0.02
NEK3-206ENST00000611833 PXT1Q8NFP0 134 aa15.2■□□□□ 0.02
NEK3-206ENST00000611833 EEF1E1-BLOC1S5C9J1V9 151 aa15.2■□□□□ 0.02
NEK3-206ENST00000611833 BCL2L11O43521 198 aa15.2■□□□□ 0.02
NEK3-206ENST00000611833 HOXD4P09016 255 aaPredicted RBP15.2■□□□□ 0.02
NEK3-206ENST00000611833 HIST1H1DP16402 221 aaKnown RBP15.2■□□□□ 0.02
NEK3-206ENST00000611833 ZNF17P17021 662 aa15.2■□□□□ 0.02
NEK3-206ENST00000611833 LUMP51884 338 aaPredicted RBP15.2■□□□□ 0.02
NEK3-206ENST00000611833 ACOT7LQ6ZUV0 252 aa15.2■□□□□ 0.02
NEK3-206ENST00000611833 IFI44Q8TCB0 444 aa15.2■□□□□ 0.02
NEK3-206ENST00000611833 NAT6Q93015 286 aa15.2■□□□□ 0.02
NEK3-206ENST00000611833 PGAM5Q96HS1 289 aa15.2■□□□□ 0.02
NEK3-206ENST00000611833 ZNF416Q9BWM5 594 aa15.2■□□□□ 0.02
NEK3-206ENST00000611833 ZNF471Q9BX82 626 aaPredicted RBP15.2■□□□□ 0.02
NEK3-206ENST00000611833 TNRC6BQ9UPQ9 1833 aaKnown RBP15.19■□□□□ 0.02
NEK3-206ENST00000611833 LOC102725191A0A1B0GVB3 256 aa15.19■□□□□ 0.02
NEK3-206ENST00000611833 A0A1W2PP11 408 aa15.19■□□□□ 0.02
NEK3-206ENST00000611833 C5orf51A6NDU8 294 aa15.19■□□□□ 0.02
NEK3-206ENST00000611833 DUS4LO95620 317 aaKnown RBP15.19■□□□□ 0.02
NEK3-206ENST00000611833 FGF5P12034 268 aa15.19■□□□□ 0.02
NEK3-206ENST00000611833 NR2C1P13056 603 aa15.19■□□□□ 0.02
NEK3-206ENST00000611833 CCL1P22362 96 aa15.19■□□□□ 0.02
NEK3-206ENST00000611833 ZNF239Q16600 458 aaKnown RBP15.19■□□□□ 0.02
NEK3-206ENST00000611833 MICBQ29980 383 aa15.19■□□□□ 0.02
NEK3-206ENST00000611833 SMUG1Q53HV7 270 aa15.19■□□□□ 0.02
NEK3-206ENST00000611833 FAM74A1Q5RGS3 127 aa15.19■□□□□ 0.02
NEK3-206ENST00000611833 NAA40Q86UY6 237 aa15.19■□□□□ 0.02
NEK3-206ENST00000611833 OR56B1Q8NGI3 324 aa15.19■□□□□ 0.02
NEK3-206ENST00000611833 C1orf147Q96MC9 270 aaPredicted RBP15.19■□□□□ 0.02
NEK3-206ENST00000611833 URM1Q9BTM9 101 aaKnown RBP15.19■□□□□ 0.02
NEK3-206ENST00000611833 GAREM1Q9H706 876 aa15.19■□□□□ 0.02
NEK3-206ENST00000611833 FN3KRPQ9HA64 309 aa15.19■□□□□ 0.02
NEK3-206ENST00000611833 LOC102723996A0A087X1L8 192 aa15.18■□□□□ 0.02
NEK3-206ENST00000611833 C13orf42A0A1B0GVH6 325 aa15.18■□□□□ 0.02
NEK3-206ENST00000611833 HOXD11P31277 338 aaPredicted RBP15.18■□□□□ 0.02
NEK3-206ENST00000611833 CSNK1A1P48729 337 aa15.18■□□□□ 0.02
NEK3-206ENST00000611833 TAS2R31P59538 309 aa15.18■□□□□ 0.02
NEK3-206ENST00000611833 FAM189A2Q15884 450 aa15.18■□□□□ 0.02
NEK3-206ENST00000611833 DMRTC1Q5HYR2 192 aa15.18■□□□□ 0.02
NEK3-206ENST00000611833 PXDC1Q5TGL8 231 aa15.18■□□□□ 0.02
NEK3-206ENST00000611833 HOGA1Q86XE5 327 aa15.18■□□□□ 0.02
NEK3-206ENST00000611833 INO80EQ8NBZ0 244 aaPredicted RBP15.18■□□□□ 0.02
NEK3-206ENST00000611833 OR10K1Q8NGX5 313 aa15.18■□□□□ 0.02
NEK3-206ENST00000611833 TERB2Q8NHR7 220 aa15.18■□□□□ 0.02
NEK3-206ENST00000611833 FBXW5Q969U6 566 aa15.18■□□□□ 0.02
NEK3-206ENST00000611833 WDR13Q9H1Z4 485 aa15.18■□□□□ 0.02
NEK3-206ENST00000611833 WDR54Q9H977 334 aa15.18■□□□□ 0.02
NEK3-206ENST00000611833 GPR160Q9UJ42 338 aa15.18■□□□□ 0.02
NEK3-206ENST00000611833 SLC6A9P48067 706 aa15.18■□□□□ 0.02
NEK3-206ENST00000611833 TAGLNQ01995 201 aaKnown RBP15.18■□□□□ 0.02
NEK3-206ENST00000611833 ARFRP1Q13795 201 aa15.18■□□□□ 0.02
NEK3-206ENST00000611833 PNLDC1Q8NA58 520 aaKnown RBP15.18■□□□□ 0.02
NEK3-206ENST00000611833 OR14K1Q8NGZ2 314 aa15.18■□□□□ 0.02
NEK3-206ENST00000611833 ZNF160Q9HCG1 818 aa15.18■□□□□ 0.02
NEK3-206ENST00000611833 RASL12Q9NYN1 266 aa15.18■□□□□ 0.02
NEK3-206ENST00000611833 IGHV1-45A0A0A0MS14 117 aa15.17■□□□□ 0.02
NEK3-206ENST00000611833 RNF222A6NCQ9 220 aa15.17■□□□□ 0.02
NEK3-206ENST00000611833 F5H5K5 113 aa15.17■□□□□ 0.02
NEK3-206ENST00000611833 UMODP07911 640 aa15.17■□□□□ 0.02
NEK3-206ENST00000611833 CYC1P08574 325 aa15.17■□□□□ 0.02
NEK3-206ENST00000611833 TMEM50BP56557 158 aa15.17■□□□□ 0.02
NEK3-206ENST00000611833 BTN1A1Q13410 526 aa15.17■□□□□ 0.02
NEK3-206ENST00000611833 ACTBL2Q562R1 376 aa15.17■□□□□ 0.02
NEK3-206ENST00000611833 ARMC10Q8N2F6 343 aa15.17■□□□□ 0.02
NEK3-206ENST00000611833 GTPBP8Q8N3Z3 284 aaPredicted RBP15.17■□□□□ 0.02
NEK3-206ENST00000611833 SPERTQ8NA61 448 aa15.17■□□□□ 0.02
NEK3-206ENST00000611833 ARHGAP5-AS1Q96IT6 56 aa15.17■□□□□ 0.02
NEK3-206ENST00000611833 SHARPINQ9H0F6 387 aa15.17■□□□□ 0.02
NEK3-206ENST00000611833 NXT1Q9UKK6 140 aaKnown RBP15.17■□□□□ 0.02
NEK3-206ENST00000611833 A0A087WZY1 265 aa15.17■□□□□ 0.02
NEK3-206ENST00000611833 IGKV1-9A0A0C4DH69 117 aa15.17■□□□□ 0.02
NEK3-206ENST00000611833 WDPCPO95876 746 aa15.17■□□□□ 0.02
NEK3-206ENST00000611833 MSR1P21757 451 aa15.17■□□□□ 0.02
NEK3-206ENST00000611833 NPY4RP50391 375 aa15.17■□□□□ 0.02
NEK3-206ENST00000611833 LSM6P62312 80 aaKnown RBP15.17■□□□□ 0.02
NEK3-206ENST00000611833 IL11RAQ14626 422 aa15.17■□□□□ 0.02
NEK3-206ENST00000611833 PNLIPRP3Q17RR3 467 aa15.17■□□□□ 0.02
NEK3-206ENST00000611833 RAET1LQ5VY80 246 aa15.17■□□□□ 0.02
NEK3-206ENST00000611833 OPN5Q6U736 354 aa15.17■□□□□ 0.02
NEK3-206ENST00000611833 EIF4E3Q8N5X7 224 aaKnown RBP15.17■□□□□ 0.02
NEK3-206ENST00000611833 OR51T1Q8NGJ9 327 aa15.17■□□□□ 0.02
NEK3-206ENST00000611833 OR5D18Q8NGL1 313 aa15.17■□□□□ 0.02
NEK3-206ENST00000611833 NPRL2Q8WTW4 380 aa15.17■□□□□ 0.02
NEK3-206ENST00000611833 ZNF75AQ96N20 296 aa15.17■□□□□ 0.02
NEK3-206ENST00000611833 OR10A2Q9H208 303 aa15.17■□□□□ 0.02
NEK3-206ENST00000611833 MBD2Q9UBB5 411 aa15.17■□□□□ 0.02
NEK3-206ENST00000611833 DMDP11532 3685 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms