RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 MEPCEQ7L2J0 689 aaKnown RBP11.9□□□□□ -0.5
LIG1-218ENST00000599322 COMMD2Q86X83 199 aa11.9□□□□□ -0.5
LIG1-218ENST00000599322 TCEANCQ8N8B7 351 aa11.9□□□□□ -0.5
LIG1-218ENST00000599322 OR8B3Q8NGG8 313 aa11.9□□□□□ -0.5
LIG1-218ENST00000599322 FAM81AQ8TBF8 368 aa11.9□□□□□ -0.5
LIG1-218ENST00000599322 ZNF418Q8TF45 676 aaPredicted RBP11.9□□□□□ -0.5
LIG1-218ENST00000599322 SPSB4Q96A44 273 aa11.9□□□□□ -0.5
LIG1-218ENST00000599322 SGK3Q96BR1 496 aa11.9□□□□□ -0.5
LIG1-218ENST00000599322 NEIL1Q96FI4 390 aaPredicted RBP11.9□□□□□ -0.5
LIG1-218ENST00000599322 OR8B2Q96RD0 313 aa11.9□□□□□ -0.5
LIG1-218ENST00000599322 MICU1Q9BPX6 476 aa11.9□□□□□ -0.5
LIG1-218ENST00000599322 MRI1Q9BV20 369 aa11.9□□□□□ -0.5
LIG1-218ENST00000599322 SEMA6AQ9H2E6 1030 aa11.9□□□□□ -0.5
LIG1-218ENST00000599322 IKZF2Q9UKS7 526 aa11.9□□□□□ -0.5
LIG1-218ENST00000599322 DYSFO75923 2080 aa11.9□□□□□ -0.51
LIG1-218ENST00000599322 A0A1B0GWJ7 208 aa11.89□□□□□ -0.51
LIG1-218ENST00000599322 ZAR1LA6NP61 321 aa11.89□□□□□ -0.51
LIG1-218ENST00000599322 ZNF670-ZNF695F2Z2N8 137 aa11.89□□□□□ -0.51
LIG1-218ENST00000599322 NDUFA2O43678 99 aa11.89□□□□□ -0.51
LIG1-218ENST00000599322 MRPL3P09001 348 aaKnown RBP11.89□□□□□ -0.51
LIG1-218ENST00000599322 PSKH1P11801 424 aa11.89□□□□□ -0.51
LIG1-218ENST00000599322 ALOX5APP20292 161 aa11.89□□□□□ -0.51
LIG1-218ENST00000599322 FPR2P25090 351 aa11.89□□□□□ -0.51
LIG1-218ENST00000599322 GSK3AP49840 483 aa11.89□□□□□ -0.51
LIG1-218ENST00000599322 RIDAP52758 137 aaKnown RBP11.89□□□□□ -0.51
LIG1-218ENST00000599322 PSMA6P60900 246 aaKnown RBP11.89□□□□□ -0.51
LIG1-218ENST00000599322 CDC42P60953 191 aa11.89□□□□□ -0.51
LIG1-218ENST00000599322 FAM3AP98173 230 aa11.89□□□□□ -0.51
LIG1-218ENST00000599322 MAB21L1Q13394 359 aa11.89□□□□□ -0.51
LIG1-218ENST00000599322 ZNF829Q3KNS6 432 aaPredicted RBP11.89□□□□□ -0.51
LIG1-218ENST00000599322 PRAMEF6Q5VXH4 476 aa11.89□□□□□ -0.51
LIG1-218ENST00000599322 NXNL2Q5VZ03 156 aa11.89□□□□□ -0.51
LIG1-218ENST00000599322 BTNL3Q6UXE8 466 aa11.89□□□□□ -0.51
LIG1-218ENST00000599322 LRRN1Q6UXK5 716 aa11.89□□□□□ -0.51
LIG1-218ENST00000599322 ASRGL1Q7L266 308 aa11.89□□□□□ -0.51
LIG1-218ENST00000599322 BOLLQ8N9W6 283 aaKnown RBP11.89□□□□□ -0.51
LIG1-218ENST00000599322 BBS1Q8NFJ9 593 aa11.89□□□□□ -0.51
LIG1-218ENST00000599322 TMEM163Q8TC26 289 aa11.89□□□□□ -0.51
LIG1-218ENST00000599322 Q8TCH9 128 aa11.89□□□□□ -0.51
LIG1-218ENST00000599322 RFKQ969G6 155 aa11.89□□□□□ -0.51
LIG1-218ENST00000599322 SIGLEC11Q96RL6 698 aa11.89□□□□□ -0.51
LIG1-218ENST00000599322 PAPOLGQ9BWT3 736 aaKnown RBP11.89□□□□□ -0.51
LIG1-218ENST00000599322 RIBC2Q9H4K1 309 aa11.89□□□□□ -0.51
LIG1-218ENST00000599322 IMPAD1Q9NX62 359 aa11.89□□□□□ -0.51
LIG1-218ENST00000599322 DCAF16Q9NXF7 216 aa11.89□□□□□ -0.51
LIG1-218ENST00000599322 OAZ3Q9UMX2 235 aa11.89□□□□□ -0.51
LIG1-218ENST00000599322 A0A0A6YYJ9 748 aa11.88□□□□□ -0.51
LIG1-218ENST00000599322 TRAV38-1A0A0B4J264 116 aa11.88□□□□□ -0.51
LIG1-218ENST00000599322 TMEM269A0A1B0GVZ9 245 aa11.88□□□□□ -0.51
LIG1-218ENST00000599322 SAC3D1A6NKF1 404 aa11.88□□□□□ -0.51
LIG1-218ENST00000599322 CEACAM18A8MTB9 384 aa11.88□□□□□ -0.51
LIG1-218ENST00000599322 PRKYO43930 277 aa11.88□□□□□ -0.51
LIG1-218ENST00000599322 MITFO75030 526 aaPredicted RBP11.88□□□□□ -0.51
LIG1-218ENST00000599322 FAM20BO75063 409 aa11.88□□□□□ -0.51
LIG1-218ENST00000599322 ZNF205O95201 554 aa11.88□□□□□ -0.51
LIG1-218ENST00000599322 SLC2A5P22732 501 aa11.88□□□□□ -0.51
LIG1-218ENST00000599322 DCTDP32321 178 aa11.88□□□□□ -0.51
LIG1-218ENST00000599322 MAP2K3P46734 347 aa11.88□□□□□ -0.51
LIG1-218ENST00000599322 POU4F2Q12837 409 aa11.88□□□□□ -0.51
LIG1-218ENST00000599322 OR8B8Q15620 311 aa11.88□□□□□ -0.51
LIG1-218ENST00000599322 DCDC5Q6ZRR9 648 aa11.88□□□□□ -0.51
LIG1-218ENST00000599322 THAP5Q7Z6K1 395 aa11.88□□□□□ -0.51
LIG1-218ENST00000599322 ZNF679Q8IYX0 411 aa11.88□□□□□ -0.51
LIG1-218ENST00000599322 PYDC1Q8WXC3 89 aa11.88□□□□□ -0.51
LIG1-218ENST00000599322 IL4I1Q96RQ9 567 aa11.88□□□□□ -0.51
LIG1-218ENST00000599322 JMJD8Q96S16 334 aa11.88□□□□□ -0.51
LIG1-218ENST00000599322 AMELYQ99218 206 aa11.88□□□□□ -0.51
LIG1-218ENST00000599322 CIB1Q99828 191 aa11.88□□□□□ -0.51
LIG1-218ENST00000599322 RTL8AQ9BWD3 113 aa11.88□□□□□ -0.51
LIG1-218ENST00000599322 SSBP3Q9BWW4 388 aaPredicted RBP11.88□□□□□ -0.51
LIG1-218ENST00000599322 TMEM165Q9HC07 324 aa11.88□□□□□ -0.51
LIG1-218ENST00000599322 G6PC2Q9NQR9 355 aa11.88□□□□□ -0.51
LIG1-218ENST00000599322 C1orf123Q9NWV4 160 aa11.88□□□□□ -0.51
LIG1-218ENST00000599322 ERVK-18Q9QC07 812 aa11.88□□□□□ -0.51
LIG1-218ENST00000599322 LRP12Q9Y561 859 aa11.88□□□□□ -0.51
LIG1-218ENST00000599322 MPC1Q9Y5U8 109 aa11.88□□□□□ -0.51
LIG1-218ENST00000599322 SNTNA6NMZ2 147 aa11.87□□□□□ -0.51
LIG1-218ENST00000599322 MTRF1O75570 445 aaKnown RBP11.87□□□□□ -0.51
LIG1-218ENST00000599322 WNT2P09544 360 aa11.87□□□□□ -0.51
LIG1-218ENST00000599322 ATP6V1B1P15313 513 aa11.87□□□□□ -0.51
LIG1-218ENST00000599322 PITPNBP48739 271 aa11.87□□□□□ -0.51
LIG1-218ENST00000599322 ZNF404Q494X3 552 aa11.87□□□□□ -0.51
LIG1-218ENST00000599322 CD276Q5ZPR3 534 aa11.87□□□□□ -0.51
LIG1-218ENST00000599322 C12orf73Q69YU5 71 aa11.87□□□□□ -0.51
LIG1-218ENST00000599322 RBMS3Q6XE24 437 aaKnown RBP11.87□□□□□ -0.51
LIG1-218ENST00000599322 KCTD8Q6ZWB6 473 aa11.87□□□□□ -0.51
LIG1-218ENST00000599322 DEFB108BQ8NET1 73 aa11.87□□□□□ -0.51
LIG1-218ENST00000599322 OR8J1Q8NGP2 316 aa11.87□□□□□ -0.51
LIG1-218ENST00000599322 TMEM246Q9BRR3 403 aa11.87□□□□□ -0.51
LIG1-218ENST00000599322 CLN8Q9UBY8 286 aa11.87□□□□□ -0.51
LIG1-218ENST00000599322 WARS2Q9UGM6 360 aaKnown RBP11.87□□□□□ -0.51
LIG1-218ENST00000599322 GTF2A1LQ9UNN4 478 aa11.87□□□□□ -0.51
LIG1-218ENST00000599322 AUP1Q9Y679 476 aa11.87□□□□□ -0.51
LIG1-218ENST00000599322 TANC2Q9HCD6 1990 aa11.87□□□□□ -0.51
LIG1-218ENST00000599322 SVEP1Q4LDE5 3571 aa11.87□□□□□ -0.51
LIG1-218ENST00000599322 LOC105371242A0A075B767 164 aa11.86□□□□□ -0.51
LIG1-218ENST00000599322 hCG_38984A0A1B0GV85 526 aa11.86□□□□□ -0.51
LIG1-218ENST00000599322 LGALS8O00214 317 aa11.86□□□□□ -0.51
LIG1-218ENST00000599322 NPY4RP50391 375 aa11.86□□□□□ -0.51
LIG1-218ENST00000599322 HCCSP53701 268 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms