RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 REEP6Q96HR9 211 aa12.58□□□□□ -0.4
LIG1-215ENST00000597901 OR8B2Q96RD0 313 aa12.58□□□□□ -0.4
LIG1-215ENST00000597901 BRD7Q9NPI1 651 aa12.58□□□□□ -0.4
LIG1-215ENST00000597901 C14orf119Q9NWQ9 140 aa12.58□□□□□ -0.4
LIG1-215ENST00000597901 C1orf123Q9NWV4 160 aa12.58□□□□□ -0.4
LIG1-215ENST00000597901 DNAJC27Q9NZQ0 273 aa12.58□□□□□ -0.4
LIG1-215ENST00000597901 ZNF69Q9UC07 566 aa12.58□□□□□ -0.4
LIG1-215ENST00000597901 ARHGAP32A7KAX9 2087 aa12.58□□□□□ -0.4
LIG1-215ENST00000597901 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.57□□□□□ -0.4
LIG1-215ENST00000597901 LGALS8O00214 317 aa12.57□□□□□ -0.4
LIG1-215ENST00000597901 PRODHO43272 600 aa12.57□□□□□ -0.4
LIG1-215ENST00000597901 TIPRLO75663 272 aa12.57□□□□□ -0.4
LIG1-215ENST00000597901 LYNP07948 512 aa12.57□□□□□ -0.4
LIG1-215ENST00000597901 PSMB10P40306 273 aa12.57□□□□□ -0.4
LIG1-215ENST00000597901 PITPNBP48739 271 aa12.57□□□□□ -0.4
LIG1-215ENST00000597901 GSK3AP49840 483 aa12.57□□□□□ -0.4
LIG1-215ENST00000597901 DAPP51397 102 aa12.57□□□□□ -0.4
LIG1-215ENST00000597901 HCCSP53701 268 aa12.57□□□□□ -0.4
LIG1-215ENST00000597901 CRISP1P54107 249 aa12.57□□□□□ -0.4
LIG1-215ENST00000597901 ACTG1P63261 375 aa12.57□□□□□ -0.4
LIG1-215ENST00000597901 TUSC1Q2TAM9 212 aa12.57□□□□□ -0.4
LIG1-215ENST00000597901 ARMCX4Q5H9R4 360 aa12.57□□□□□ -0.4
LIG1-215ENST00000597901 SLC35D3Q5M8T2 416 aa12.57□□□□□ -0.4
LIG1-215ENST00000597901 WDR25Q64LD2 544 aaPredicted RBP12.57□□□□□ -0.4
LIG1-215ENST00000597901 BTNL3Q6UXE8 466 aa12.57□□□□□ -0.4
LIG1-215ENST00000597901 C11orf53Q8IXP5 236 aa12.57□□□□□ -0.4
LIG1-215ENST00000597901 BCL6BQ8N143 479 aaPredicted RBP12.57□□□□□ -0.4
LIG1-215ENST00000597901 ZDHHC22Q8N966 263 aa12.57□□□□□ -0.4
LIG1-215ENST00000597901 BBS1Q8NFJ9 593 aa12.57□□□□□ -0.4
LIG1-215ENST00000597901 DACT3Q96B18 629 aaPredicted RBP12.57□□□□□ -0.4
LIG1-215ENST00000597901 PGAM5Q96HS1 289 aa12.57□□□□□ -0.4
LIG1-215ENST00000597901 TEX12Q9BXU0 123 aa12.57□□□□□ -0.4
LIG1-215ENST00000597901 OR10A2Q9H208 303 aa12.57□□□□□ -0.4
LIG1-215ENST00000597901 SLC25A19Q9HC21 320 aa12.57□□□□□ -0.4
LIG1-215ENST00000597901 TVP23BQ9NYZ1 205 aa12.57□□□□□ -0.4
LIG1-215ENST00000597901 CLN8Q9UBY8 286 aa12.57□□□□□ -0.4
LIG1-215ENST00000597901 TANC2Q9HCD6 1990 aa12.57□□□□□ -0.4
LIG1-215ENST00000597901 IGHV2-70DA0A0C4DH43 119 aa12.56□□□□□ -0.4
LIG1-215ENST00000597901 LHBP01229 141 aa12.56□□□□□ -0.4
LIG1-215ENST00000597901 PPIAL4GP0DN37 164 aa12.56□□□□□ -0.4
LIG1-215ENST00000597901 ALOX5APP20292 161 aa12.56□□□□□ -0.4
LIG1-215ENST00000597901 SLC2A5P22732 501 aa12.56□□□□□ -0.4
LIG1-215ENST00000597901 CFL1P23528 166 aaKnown RBP12.56□□□□□ -0.4
LIG1-215ENST00000597901 KCNJ8Q15842 424 aa12.56□□□□□ -0.4
LIG1-215ENST00000597901 SNAPC1Q16533 368 aa12.56□□□□□ -0.4
LIG1-215ENST00000597901 FAHD1Q6P587 224 aa12.56□□□□□ -0.4
LIG1-215ENST00000597901 OR8S1Q8NH09 359 aa12.56□□□□□ -0.4
LIG1-215ENST00000597901 TEAD3Q99594 435 aa12.56□□□□□ -0.4
LIG1-215ENST00000597901 PPP1R3EQ9H7J1 279 aa12.56□□□□□ -0.4
LIG1-215ENST00000597901 ESM1Q9NQ30 184 aa12.56□□□□□ -0.4
LIG1-215ENST00000597901 PAPOLBQ9NRJ5 636 aaKnown RBP12.56□□□□□ -0.4
LIG1-215ENST00000597901 KLHDC2Q9Y2U9 406 aa12.56□□□□□ -0.4
LIG1-215ENST00000597901 RHBDD3Q9Y3P4 386 aa12.56□□□□□ -0.4
LIG1-215ENST00000597901 TRAV38-1A0A0B4J264 116 aa12.55□□□□□ -0.4
LIG1-215ENST00000597901 hCG_38984A0A1B0GV85 526 aa12.55□□□□□ -0.4
LIG1-215ENST00000597901 TMEM89A2RUT3 159 aa12.55□□□□□ -0.4
LIG1-215ENST00000597901 A6NLC8 198 aa12.55□□□□□ -0.4
LIG1-215ENST00000597901 C3orf80F5H4A9 247 aa12.55□□□□□ -0.4
LIG1-215ENST00000597901 NDUFA2O43678 99 aa12.55□□□□□ -0.4
LIG1-215ENST00000597901 NAA10P41227 235 aaPredicted RBP12.55□□□□□ -0.4
LIG1-215ENST00000597901 RPS7P62081 194 aaKnown RBP12.55□□□□□ -0.4
LIG1-215ENST00000597901 APOFQ13790 326 aa12.55□□□□□ -0.4
LIG1-215ENST00000597901 PTGES3Q15185 160 aaKnown RBP12.55□□□□□ -0.4
LIG1-215ENST00000597901 OR8B8Q15620 311 aa12.55□□□□□ -0.4
LIG1-215ENST00000597901 RBMS3Q6XE24 437 aaKnown RBP12.55□□□□□ -0.4
LIG1-215ENST00000597901 GCSAMQ8N6F7 178 aa12.55□□□□□ -0.4
LIG1-215ENST00000597901 SIGLECL1Q8N7X8 197 aa12.55□□□□□ -0.4
LIG1-215ENST00000597901 CSNK2A3Q8NEV1 391 aa12.55□□□□□ -0.4
LIG1-215ENST00000597901 OR5K1Q8NHB7 308 aa12.55□□□□□ -0.4
LIG1-215ENST00000597901 DNAJC9Q8WXX5 260 aa12.55□□□□□ -0.4
LIG1-215ENST00000597901 GCDHQ92947 438 aaPredicted RBP12.55□□□□□ -0.4
LIG1-215ENST00000597901 NUDT16L1Q9BRJ7 211 aaKnown RBP12.55□□□□□ -0.4
LIG1-215ENST00000597901 RASSF4Q9H2L5 321 aa12.55□□□□□ -0.4
LIG1-215ENST00000597901 RGCCQ9H4X1 137 aa12.55□□□□□ -0.4
LIG1-215ENST00000597901 ERVK-18Q9QC07 812 aa12.55□□□□□ -0.4
LIG1-215ENST00000597901 OOEPA6NGQ2 149 aa12.54□□□□□ -0.4
LIG1-215ENST00000597901 PHYHO14832 338 aa12.54□□□□□ -0.4
LIG1-215ENST00000597901 IGHV4-38-2P0DP08 117 aa12.54□□□□□ -0.4
LIG1-215ENST00000597901 NPY4RP50391 375 aa12.54□□□□□ -0.4
LIG1-215ENST00000597901 RASSF2P50749 326 aa12.54□□□□□ -0.4
LIG1-215ENST00000597901 POU4F2Q12837 409 aa12.54□□□□□ -0.4
LIG1-215ENST00000597901 GFOD2Q3B7J2 385 aa12.54□□□□□ -0.4
LIG1-215ENST00000597901 CD276Q5ZPR3 534 aa12.54□□□□□ -0.4
LIG1-215ENST00000597901 DOK3Q7L591 496 aa12.54□□□□□ -0.4
LIG1-215ENST00000597901 WDR86Q86TI4 376 aa12.54□□□□□ -0.4
LIG1-215ENST00000597901 PARP8Q8N3A8 854 aa12.54□□□□□ -0.4
LIG1-215ENST00000597901 OR1M1Q8NGA1 313 aa12.54□□□□□ -0.4
LIG1-215ENST00000597901 UPRTQ96BW1 309 aa12.54□□□□□ -0.4
LIG1-215ENST00000597901 YIPF3Q9GZM5 350 aa12.54□□□□□ -0.4
LIG1-215ENST00000597901 MS4A7Q9GZW8 240 aaPredicted RBP12.54□□□□□ -0.4
LIG1-215ENST00000597901 MMADHCQ9H3L0 296 aaPredicted RBP12.54□□□□□ -0.4
LIG1-215ENST00000597901 NIPAL2Q9H841 368 aa12.54□□□□□ -0.4
LIG1-215ENST00000597901 RNPEPL1Q9HAU8 725 aa12.54□□□□□ -0.4
LIG1-215ENST00000597901 TRIM36Q9NQ86 728 aa12.54□□□□□ -0.4
LIG1-215ENST00000597901 CTSZQ9UBR2 303 aa12.54□□□□□ -0.4
LIG1-215ENST00000597901 LAMP5Q9UJQ1 280 aa12.54□□□□□ -0.4
LIG1-215ENST00000597901 SOX21Q9Y651 276 aaPredicted RBP12.54□□□□□ -0.4
LIG1-215ENST00000597901 IGHV3OR16-10A0A075B7F0 116 aa12.53□□□□□ -0.4
LIG1-215ENST00000597901 hCG_1807616A0A1W2PRN6 198 aa12.53□□□□□ -0.4
LIG1-215ENST00000597901 G3V2T6 193 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms