RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 E2F6O75461 281 aa12.73□□□□□ -0.37
LIG1-214ENST00000597146 HOXB6P17509 224 aaKnown RBP12.73□□□□□ -0.37
LIG1-214ENST00000597146 PMELP40967 661 aa12.73□□□□□ -0.37
LIG1-214ENST00000597146 FXYD6P3P58550 94 aa12.73□□□□□ -0.37
LIG1-214ENST00000597146 COL10A1Q03692 680 aa12.73□□□□□ -0.37
LIG1-214ENST00000597146 DEFB121Q5J5C9 76 aa12.73□□□□□ -0.37
LIG1-214ENST00000597146 RASSF6Q6ZTQ3 369 aa12.73□□□□□ -0.37
LIG1-214ENST00000597146 OR6V1Q8N148 313 aa12.73□□□□□ -0.37
LIG1-214ENST00000597146 SDR9C7Q8NEX9 313 aa12.73□□□□□ -0.37
LIG1-214ENST00000597146 PROKR2Q8NFJ6 384 aa12.73□□□□□ -0.37
LIG1-214ENST00000597146 OR2T4Q8NH00 348 aa12.73□□□□□ -0.37
LIG1-214ENST00000597146 GIPC3Q8TF64 312 aa12.73□□□□□ -0.37
LIG1-214ENST00000597146 PTP4A1Q93096 173 aa12.73□□□□□ -0.37
LIG1-214ENST00000597146 OTULINQ96BN8 352 aa12.73□□□□□ -0.37
LIG1-214ENST00000597146 BTBD10Q9BSF8 475 aa12.73□□□□□ -0.37
LIG1-214ENST00000597146 ZNF556Q9HAH1 456 aa12.73□□□□□ -0.37
LIG1-214ENST00000597146 FAM96BQ9Y3D0 163 aa12.73□□□□□ -0.37
LIG1-214ENST00000597146 DHRS12A0PJE2 317 aa12.72□□□□□ -0.37
LIG1-214ENST00000597146 OR6C6A6NF89 314 aa12.72□□□□□ -0.37
LIG1-214ENST00000597146 AQP12BA6NM10 295 aa12.72□□□□□ -0.37
LIG1-214ENST00000597146 IFNGP01579 166 aa12.72□□□□□ -0.37
LIG1-214ENST00000597146 PSMB10P40306 273 aa12.72□□□□□ -0.37
LIG1-214ENST00000597146 RASSF2P50749 326 aa12.72□□□□□ -0.37
LIG1-214ENST00000597146 CD69Q07108 199 aa12.72□□□□□ -0.37
LIG1-214ENST00000597146 FLOT2Q14254 428 aa12.72□□□□□ -0.37
LIG1-214ENST00000597146 TAF13Q15543 124 aa12.72□□□□□ -0.37
LIG1-214ENST00000597146 KCNMB1Q16558 191 aa12.72□□□□□ -0.37
LIG1-214ENST00000597146 MEP1BQ16820 701 aa12.72□□□□□ -0.37
LIG1-214ENST00000597146 ZBTB37Q5TC79 503 aa12.72□□□□□ -0.37
LIG1-214ENST00000597146 CORO6Q6QEF8 472 aa12.72□□□□□ -0.37
LIG1-214ENST00000597146 AQP12AQ8IXF9 295 aa12.72□□□□□ -0.37
LIG1-214ENST00000597146 OR4S1Q8NGB4 309 aa12.72□□□□□ -0.37
LIG1-214ENST00000597146 PPP1R35Q8TAP8 253 aa12.72□□□□□ -0.37
LIG1-214ENST00000597146 MMADHCQ9H3L0 296 aaPredicted RBP12.72□□□□□ -0.37
LIG1-214ENST00000597146 FN3KQ9H479 309 aa12.72□□□□□ -0.37
LIG1-214ENST00000597146 SMURF1Q9HCE7 757 aa12.72□□□□□ -0.37
LIG1-214ENST00000597146 FAM53CQ9NYF3 392 aa12.72□□□□□ -0.37
LIG1-214ENST00000597146 BAIAP2Q9UQB8 552 aa12.72□□□□□ -0.37
LIG1-214ENST00000597146 STARD10Q9Y365 291 aa12.72□□□□□ -0.37
LIG1-214ENST00000597146 WI2-2373I1.2A0A1W2PRP0 233 aa12.71□□□□□ -0.37
LIG1-214ENST00000597146 OR6C68A6NDL8 312 aa12.71□□□□□ -0.37
LIG1-214ENST00000597146 RIIAD1A6NNX1 92 aa12.71□□□□□ -0.37
LIG1-214ENST00000597146 F5H5P2 479 aa12.71□□□□□ -0.37
LIG1-214ENST00000597146 H3BN98 237 aa12.71□□□□□ -0.37
LIG1-214ENST00000597146 DNAJC8O75937 253 aaPredicted RBP12.71□□□□□ -0.37
LIG1-214ENST00000597146 IGLL1P15814 213 aa12.71□□□□□ -0.37
LIG1-214ENST00000597146 POU1F1P28069 291 aa12.71□□□□□ -0.37
LIG1-214ENST00000597146 MAGEA2P43356 314 aa12.71□□□□□ -0.37
LIG1-214ENST00000597146 RGS6P49758 472 aa12.71□□□□□ -0.37
LIG1-214ENST00000597146 ARF6P62330 175 aa12.71□□□□□ -0.37
LIG1-214ENST00000597146 PRB3Q04118 309 aaPredicted RBP12.71□□□□□ -0.37
LIG1-214ENST00000597146 ECH1Q13011 328 aa12.71□□□□□ -0.37
LIG1-214ENST00000597146 CCDC92Q53HC0 331 aaPredicted RBP12.71□□□□□ -0.37
LIG1-214ENST00000597146 LINC00346Q8IVM7 164 aa12.71□□□□□ -0.37
LIG1-214ENST00000597146 CYB561A3Q8NBI2 242 aa12.71□□□□□ -0.37
LIG1-214ENST00000597146 OR2T33Q8NG76 320 aa12.71□□□□□ -0.37
LIG1-214ENST00000597146 OR10G2Q8NGC3 310 aa12.71□□□□□ -0.37
LIG1-214ENST00000597146 OR4C15Q8NGM1 316 aa12.71□□□□□ -0.37
LIG1-214ENST00000597146 TEX47Q8TBZ9 253 aa12.71□□□□□ -0.37
LIG1-214ENST00000597146 SLC7A6Q92536 515 aa12.71□□□□□ -0.37
LIG1-214ENST00000597146 R3HDM4Q96D70 268 aa12.71□□□□□ -0.37
LIG1-214ENST00000597146 HDHD2Q9H0R4 259 aa12.71□□□□□ -0.37
LIG1-214ENST00000597146 IL20Q9NYY1 176 aa12.71□□□□□ -0.37
LIG1-214ENST00000597146 DNAH1Q9P2D7 4330 aa12.7□□□□□ -0.38
LIG1-214ENST00000597146 IGLV1-36A0A0B4J1U3 117 aa12.7□□□□□ -0.38
LIG1-214ENST00000597146 LRRC30A6NM36 301 aa12.7□□□□□ -0.38
LIG1-214ENST00000597146 F5H5K5 113 aa12.7□□□□□ -0.38
LIG1-214ENST00000597146 RNASEK-C17orf49H0YIS7 233 aa12.7□□□□□ -0.38
LIG1-214ENST00000597146 DCTN6O00399 190 aa12.7□□□□□ -0.38
LIG1-214ENST00000597146 MLNRO43193 412 aa12.7□□□□□ -0.38
LIG1-214ENST00000597146 SOX14O95416 240 aa12.7□□□□□ -0.38
LIG1-214ENST00000597146 FSTL3O95633 263 aa12.7□□□□□ -0.38
LIG1-214ENST00000597146 LIPFP07098 398 aa12.7□□□□□ -0.38
LIG1-214ENST00000597146 FBP1P09467 338 aa12.7□□□□□ -0.38
LIG1-214ENST00000597146 FMO3P31513 532 aa12.7□□□□□ -0.38
LIG1-214ENST00000597146 PYCR1P32322 319 aa12.7□□□□□ -0.38
LIG1-214ENST00000597146 SRP9P49458 86 aaKnown RBP12.7□□□□□ -0.38
LIG1-214ENST00000597146 MALLQ13021 153 aa12.7□□□□□ -0.38
LIG1-214ENST00000597146 GK3PQ14409 553 aa12.7□□□□□ -0.38
LIG1-214ENST00000597146 ZNF181Q2M3W8 571 aa12.7□□□□□ -0.38
LIG1-214ENST00000597146 VMO1Q7Z5L0 202 aa12.7□□□□□ -0.38
LIG1-214ENST00000597146 C1orf87Q8N0U7 546 aa12.7□□□□□ -0.38
LIG1-214ENST00000597146 SLC26A10Q8NG04 563 aa12.7□□□□□ -0.38
LIG1-214ENST00000597146 CANT1Q8WVQ1 401 aa12.7□□□□□ -0.38
LIG1-214ENST00000597146 APOBEC3DQ96AK3 386 aaPredicted RBP12.7□□□□□ -0.38
LIG1-214ENST00000597146 HAVCR1Q96D42 359 aa12.7□□□□□ -0.38
LIG1-214ENST00000597146 FEVQ99581 238 aa12.7□□□□□ -0.38
LIG1-214ENST00000597146 HCAR1Q9BXC0 346 aa12.7□□□□□ -0.38
LIG1-214ENST00000597146 TEX12Q9BXU0 123 aa12.7□□□□□ -0.38
LIG1-214ENST00000597146 PTTG3PQ9NZH4 202 aa12.7□□□□□ -0.38
LIG1-214ENST00000597146 A0A1W2PRD5 423 aa12.69□□□□□ -0.38
LIG1-214ENST00000597146 A0A1W2PRF3 423 aa12.69□□□□□ -0.38
LIG1-214ENST00000597146 A0A1W2PRM7 423 aa12.69□□□□□ -0.38
LIG1-214ENST00000597146 ACOT8O14734 319 aa12.69□□□□□ -0.38
LIG1-214ENST00000597146 FCN3O75636 299 aa12.69□□□□□ -0.38
LIG1-214ENST00000597146 LCATP04180 440 aa12.69□□□□□ -0.38
LIG1-214ENST00000597146 DBHP09172 617 aa12.69□□□□□ -0.38
LIG1-214ENST00000597146 VSIG10L2P0DP72 767 aa12.69□□□□□ -0.38
LIG1-214ENST00000597146 NPY4RP50391 375 aa12.69□□□□□ -0.38
LIG1-214ENST00000597146 TPTEP56180 551 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms