RNA–Protein interactions for RNA: ENST00000576502.5

NDE1-211, Transcript of nudE neurodevelopment protein 1, human

TSL 2

Gene NDE1, Length 1,131 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NDE1-211	ENST00000576502	ZFP1	Q6P2D0	407 aa		11.62	□□□□□ -0.55
NDE1-211	ENST00000576502	BTNL3	Q6UXE8	466 aa		11.62	□□□□□ -0.55
NDE1-211	ENST00000576502	DCDC5	Q6ZRR9	648 aa		11.62	□□□□□ -0.55
NDE1-211	ENST00000576502	ASRGL1	Q7L266	308 aa		11.62	□□□□□ -0.55
NDE1-211	ENST00000576502	C1QL2	Q7Z5L3	287 aa		11.62	□□□□□ -0.55
NDE1-211	ENST00000576502	GID4	Q8IVV7	300 aa		11.62	□□□□□ -0.55
NDE1-211	ENST00000576502	NEIL1	Q96FI4	390 aa	Predicted RBP	11.62	□□□□□ -0.55
NDE1-211	ENST00000576502	JMJD8	Q96S16	334 aa		11.62	□□□□□ -0.55
NDE1-211	ENST00000576502	TEAD3	Q99594	435 aa		11.62	□□□□□ -0.55
NDE1-211	ENST00000576502	SSBP3	Q9BWW4	388 aa	Predicted RBP	11.62	□□□□□ -0.55
NDE1-211	ENST00000576502	BRD7	Q9NPI1	651 aa		11.62	□□□□□ -0.55
NDE1-211	ENST00000576502	UFSP2	Q9NUQ7	469 aa		11.62	□□□□□ -0.55
NDE1-211	ENST00000576502	TRAV38-1	A0A0B4J264	116 aa		11.61	□□□□□ -0.55
NDE1-211	ENST00000576502	IGHV3-64D	A0A0J9YX35	117 aa		11.61	□□□□□ -0.55
NDE1-211	ENST00000576502	hCG_1807616	A0A1W2PRN6	198 aa		11.61	□□□□□ -0.55
NDE1-211	ENST00000576502	EBAG9	O00559	213 aa		11.61	□□□□□ -0.55
NDE1-211	ENST00000576502	NDUFA2	O43678	99 aa		11.61	□□□□□ -0.55
NDE1-211	ENST00000576502	FAM20B	O75063	409 aa		11.61	□□□□□ -0.55
NDE1-211	ENST00000576502	ZNF254	O75437	659 aa		11.61	□□□□□ -0.55
NDE1-211	ENST00000576502	PTBP3	O95758	552 aa	Known RBP	11.61	□□□□□ -0.55
NDE1-211	ENST00000576502	ALOX5AP	P20292	161 aa		11.61	□□□□□ -0.55
NDE1-211	ENST00000576502	EPHA1	P21709	976 aa		11.61	□□□□□ -0.55
NDE1-211	ENST00000576502	FPR2	P25090	351 aa		11.61	□□□□□ -0.55
NDE1-211	ENST00000576502	FAM3A	P98173	230 aa		11.61	□□□□□ -0.55
NDE1-211	ENST00000576502	IL5RA	Q01344	420 aa		11.61	□□□□□ -0.55
NDE1-211	ENST00000576502	ZNF404	Q494X3	552 aa		11.61	□□□□□ -0.55
NDE1-211	ENST00000576502	PRAMEF6	Q5VXH4	476 aa		11.61	□□□□□ -0.55
NDE1-211	ENST00000576502	SLX4IP	Q5VYV7	408 aa		11.61	□□□□□ -0.55
NDE1-211	ENST00000576502	NXNL2	Q5VZ03	156 aa		11.61	□□□□□ -0.55
NDE1-211	ENST00000576502	AMIGO2	Q86SJ2	522 aa		11.61	□□□□□ -0.55
NDE1-211	ENST00000576502	BBS1	Q8NFJ9	593 aa		11.61	□□□□□ -0.55
NDE1-211	ENST00000576502	TMEM163	Q8TC26	289 aa		11.61	□□□□□ -0.55
NDE1-211	ENST00000576502	LRTOMT	Q8WZ04	291 aa		11.61	□□□□□ -0.55
NDE1-211	ENST00000576502	SGK3	Q96BR1	496 aa		11.61	□□□□□ -0.55
NDE1-211	ENST00000576502	MICU1	Q9BPX6	476 aa		11.61	□□□□□ -0.55
NDE1-211	ENST00000576502	RBM4B	Q9BQ04	359 aa	Known RBP	11.61	□□□□□ -0.55
NDE1-211	ENST00000576502	PAPOLG	Q9BWT3	736 aa	Known RBP	11.61	□□□□□ -0.55
NDE1-211	ENST00000576502	TMPRSS13	Q9BYE2	586 aa		11.61	□□□□□ -0.55
NDE1-211	ENST00000576502	TMEM165	Q9HC07	324 aa		11.61	□□□□□ -0.55
NDE1-211	ENST00000576502	ARHGAP32	A7KAX9	2087 aa		11.6	□□□□□ -0.55
NDE1-211	ENST00000576502	LOC105371242	A0A075B767	164 aa		11.6	□□□□□ -0.55
NDE1-211	ENST00000576502	hCG_38984	A0A1B0GV85	526 aa		11.6	□□□□□ -0.55
NDE1-211	ENST00000576502	ZAR1L	A6NP61	321 aa		11.6	□□□□□ -0.55
NDE1-211	ENST00000576502	LGALS8	O00214	317 aa		11.6	□□□□□ -0.55
NDE1-211	ENST00000576502	WNT2	P09544	360 aa		11.6	□□□□□ -0.55
NDE1-211	ENST00000576502	DCTD	P32321	178 aa		11.6	□□□□□ -0.55
NDE1-211	ENST00000576502	PITPNB	P48739	271 aa		11.6	□□□□□ -0.55
NDE1-211	ENST00000576502	GSK3A	P49840	483 aa		11.6	□□□□□ -0.55
NDE1-211	ENST00000576502	NPY4R	P50391	375 aa		11.6	□□□□□ -0.55
NDE1-211	ENST00000576502	RIDA	P52758	137 aa	Known RBP	11.6	□□□□□ -0.55
NDE1-211	ENST00000576502	OR8B8	Q15620	311 aa		11.6	□□□□□ -0.55
NDE1-211	ENST00000576502	ARMCX4	Q5H9R4	360 aa		11.6	□□□□□ -0.55
NDE1-211	ENST00000576502	LRRN1	Q6UXK5	716 aa		11.6	□□□□□ -0.55
NDE1-211	ENST00000576502	MEPCE	Q7L2J0	689 aa	Known RBP	11.6	□□□□□ -0.55
NDE1-211	ENST00000576502	PRSS45	Q7RTY3	260 aa		11.6	□□□□□ -0.55
NDE1-211	ENST00000576502	BPIFB2	Q8N4F0	458 aa		11.6	□□□□□ -0.55
NDE1-211	ENST00000576502	TCEANC	Q8N8B7	351 aa		11.6	□□□□□ -0.55
NDE1-211	ENST00000576502	FAM81A	Q8TBF8	368 aa		11.6	□□□□□ -0.55
NDE1-211	ENST00000576502	HIST1H2AA	Q96QV6	131 aa		11.6	□□□□□ -0.55
NDE1-211	ENST00000576502	AMELY	Q99218	206 aa		11.6	□□□□□ -0.55
NDE1-211	ENST00000576502	TMEM246	Q9BRR3	403 aa		11.6	□□□□□ -0.55
NDE1-211	ENST00000576502	RTL8A	Q9BWD3	113 aa		11.6	□□□□□ -0.55
NDE1-211	ENST00000576502	SUCNR1	Q9BXA5	334 aa		11.6	□□□□□ -0.55
NDE1-211	ENST00000576502	CLN8	Q9UBY8	286 aa		11.6	□□□□□ -0.55
NDE1-211	ENST00000576502	IKZF2	Q9UKS7	526 aa		11.6	□□□□□ -0.55
NDE1-211	ENST00000576502	LRP12	Q9Y561	859 aa		11.6	□□□□□ -0.55
NDE1-211	ENST00000576502	MPC1	Q9Y5U8	109 aa		11.6	□□□□□ -0.55
NDE1-211	ENST00000576502	AUP1	Q9Y679	476 aa		11.6	□□□□□ -0.55
NDE1-211	ENST00000576502	MXRA5	Q9NR99	2828 aa		11.59	□□□□□ -0.55
NDE1-211	ENST00000576502	TMEM269	A0A1B0GVZ9	245 aa		11.59	□□□□□ -0.55
NDE1-211	ENST00000576502	PRKY	O43930	277 aa		11.59	□□□□□ -0.55
NDE1-211	ENST00000576502	ZNF205	O95201	554 aa		11.59	□□□□□ -0.55
NDE1-211	ENST00000576502	GRP	P07492	148 aa		11.59	□□□□□ -0.55
NDE1-211	ENST00000576502	MRPL3	P09001	348 aa	Known RBP	11.59	□□□□□ -0.55
NDE1-211	ENST00000576502	ATP6V1B1	P15313	513 aa		11.59	□□□□□ -0.55
NDE1-211	ENST00000576502	ZNF12	P17014	697 aa		11.59	□□□□□ -0.55
NDE1-211	ENST00000576502	ZFP36	P26651	326 aa	Known RBP	11.59	□□□□□ -0.55
NDE1-211	ENST00000576502	CDC42	P60953	191 aa		11.59	□□□□□ -0.55
NDE1-211	ENST00000576502	POU4F2	Q12837	409 aa		11.59	□□□□□ -0.55
NDE1-211	ENST00000576502	ZNF154	Q13106	437 aa		11.59	□□□□□ -0.55
NDE1-211	ENST00000576502	C12orf73	Q69YU5	71 aa		11.59	□□□□□ -0.55
NDE1-211	ENST00000576502	COMMD2	Q86X83	199 aa		11.59	□□□□□ -0.55
NDE1-211	ENST00000576502	ZNF679	Q8IYX0	411 aa		11.59	□□□□□ -0.55
NDE1-211	ENST00000576502	BOLL	Q8N9W6	283 aa	Known RBP	11.59	□□□□□ -0.55
NDE1-211	ENST00000576502	ZFAND2B	Q8WV99	257 aa		11.59	□□□□□ -0.55
NDE1-211	ENST00000576502	CIB1	Q99828	191 aa		11.59	□□□□□ -0.55
NDE1-211	ENST00000576502	SEMA6A	Q9H2E6	1030 aa		11.59	□□□□□ -0.55
NDE1-211	ENST00000576502	MOB1A	Q9H8S9	216 aa		11.59	□□□□□ -0.55
NDE1-211	ENST00000576502	RNPEPL1	Q9HAU8	725 aa		11.59	□□□□□ -0.55
NDE1-211	ENST00000576502	C1orf123	Q9NWV4	160 aa		11.59	□□□□□ -0.55
NDE1-211	ENST00000576502	ERVK-18	Q9QC07	812 aa		11.59	□□□□□ -0.55
NDE1-211	ENST00000576502	WARS2	Q9UGM6	360 aa	Known RBP	11.59	□□□□□ -0.55
NDE1-211	ENST00000576502	OAZ3	Q9UMX2	235 aa		11.59	□□□□□ -0.55
NDE1-211	ENST00000576502	INSIG2	Q9Y5U4	225 aa		11.59	□□□□□ -0.55
NDE1-211	ENST00000576502		A0A0U1RQV5	110 aa		11.58	□□□□□ -0.56
NDE1-211	ENST00000576502	CCDC182	A6NF36	153 aa		11.58	□□□□□ -0.56
NDE1-211	ENST00000576502	OOEP	A6NGQ2	149 aa		11.58	□□□□□ -0.56
NDE1-211	ENST00000576502	TMEM210	A6NLX4	147 aa		11.58	□□□□□ -0.56
NDE1-211	ENST00000576502	ZNF670-ZNF695	F2Z2N8	137 aa		11.58	□□□□□ -0.56
NDE1-211	ENST00000576502	MITF	O75030	526 aa	Predicted RBP	11.58	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms