RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 MT-ND2P03891 347 aa12.38□□□□□ -0.43
NPLOC4-218ENST00000574964 ATP6V1B1P15313 513 aa12.38□□□□□ -0.43
NPLOC4-218ENST00000574964 GNALP38405 381 aa12.38□□□□□ -0.43
NPLOC4-218ENST00000574964 KIR3DL2P43630 455 aa12.38□□□□□ -0.43
NPLOC4-218ENST00000574964 TGM4P49221 684 aa12.38□□□□□ -0.43
NPLOC4-218ENST00000574964 MMP15P51511 669 aa12.38□□□□□ -0.43
NPLOC4-218ENST00000574964 CCR9P51686 369 aa12.38□□□□□ -0.43
NPLOC4-218ENST00000574964 GTF2A1P52655 376 aaPredicted RBP12.38□□□□□ -0.43
NPLOC4-218ENST00000574964 RIPPLY1Q0D2K3 151 aa12.38□□□□□ -0.43
NPLOC4-218ENST00000574964 MED22Q15528 200 aa12.38□□□□□ -0.43
NPLOC4-218ENST00000574964 TSTQ16762 297 aaKnown RBP12.38□□□□□ -0.43
NPLOC4-218ENST00000574964 PCGF3Q3KNV8 242 aa12.38□□□□□ -0.43
NPLOC4-218ENST00000574964 TMEM255AQ5JRV8 349 aa12.38□□□□□ -0.43
NPLOC4-218ENST00000574964 TMEM244Q5VVB8 128 aa12.38□□□□□ -0.43
NPLOC4-218ENST00000574964 RNLSQ5VYX0 342 aa12.38□□□□□ -0.43
NPLOC4-218ENST00000574964 RPL22L1Q6P5R6 122 aaKnown RBP12.38□□□□□ -0.43
NPLOC4-218ENST00000574964 DOK3Q7L591 496 aa12.38□□□□□ -0.43
NPLOC4-218ENST00000574964 PRSS48Q7RTY5 328 aa12.38□□□□□ -0.43
NPLOC4-218ENST00000574964 SEMA6DQ8NFY4 1073 aa12.38□□□□□ -0.43
NPLOC4-218ENST00000574964 OR2Z1Q8NG97 314 aa12.38□□□□□ -0.43
NPLOC4-218ENST00000574964 GTF3AQ92664 365 aaKnown RBP12.38□□□□□ -0.43
NPLOC4-218ENST00000574964 ITFG2Q969R8 447 aa12.38□□□□□ -0.43
NPLOC4-218ENST00000574964 MBD6Q96DN6 1003 aa12.38□□□□□ -0.43
NPLOC4-218ENST00000574964 LYZL4Q96KX0 146 aa12.38□□□□□ -0.43
NPLOC4-218ENST00000574964 SORCS2Q96PQ0 1159 aa12.38□□□□□ -0.43
NPLOC4-218ENST00000574964 DIRC2Q96SL1 478 aa12.38□□□□□ -0.43
NPLOC4-218ENST00000574964 SOX7Q9BT81 388 aa12.38□□□□□ -0.43
NPLOC4-218ENST00000574964 SLC22A4Q9H015 551 aa12.38□□□□□ -0.43
NPLOC4-218ENST00000574964 DECR2Q9NUI1 292 aa12.38□□□□□ -0.43
NPLOC4-218ENST00000574964 ZNF701Q9NV72 531 aaPredicted RBP12.38□□□□□ -0.43
NPLOC4-218ENST00000574964 FRRS1LQ9P0K9 344 aa12.38□□□□□ -0.43
NPLOC4-218ENST00000574964 ITGB1BP2Q9UKP3 347 aa12.38□□□□□ -0.43
NPLOC4-218ENST00000574964 LRCH1Q9Y2L9 728 aa12.38□□□□□ -0.43
NPLOC4-218ENST00000574964 NOP16Q9Y3C1 178 aaKnown RBP12.38□□□□□ -0.43
NPLOC4-218ENST00000574964 ZSCAN5BA6NJL1 495 aa12.37□□□□□ -0.43
NPLOC4-218ENST00000574964 DHRS3O75911 302 aa12.37□□□□□ -0.43
NPLOC4-218ENST00000574964 IGHV1-46P01743 117 aa12.37□□□□□ -0.43
NPLOC4-218ENST00000574964 ZNF12P17014 697 aa12.37□□□□□ -0.43
NPLOC4-218ENST00000574964 CA6P23280 308 aa12.37□□□□□ -0.43
NPLOC4-218ENST00000574964 EFNA4P52798 201 aa12.37□□□□□ -0.43
NPLOC4-218ENST00000574964 TAS2R43P59537 309 aa12.37□□□□□ -0.43
NPLOC4-218ENST00000574964 NANOS3P60323 173 aaKnown RBP12.37□□□□□ -0.43
NPLOC4-218ENST00000574964 TNFAIP6P98066 277 aaPredicted RBP12.37□□□□□ -0.43
NPLOC4-218ENST00000574964 OR8G1Q15617 311 aa12.37□□□□□ -0.43
NPLOC4-218ENST00000574964 OR8B8Q15620 311 aa12.37□□□□□ -0.43
NPLOC4-218ENST00000574964 CCDC58Q4VC31 144 aa12.37□□□□□ -0.43
NPLOC4-218ENST00000574964 RDH10Q8IZV5 341 aa12.37□□□□□ -0.43
NPLOC4-218ENST00000574964 CCDC54Q8NEL0 328 aa12.37□□□□□ -0.43
NPLOC4-218ENST00000574964 OR5AK2Q8NH90 309 aa12.37□□□□□ -0.43
NPLOC4-218ENST00000574964 PIGCQ92535 297 aa12.37□□□□□ -0.43
NPLOC4-218ENST00000574964 ELMOD3Q96FG2 381 aa12.37□□□□□ -0.43
NPLOC4-218ENST00000574964 SLC30A2Q9BRI3 323 aa12.37□□□□□ -0.43
NPLOC4-218ENST00000574964 PAPOLGQ9BWT3 736 aaKnown RBP12.37□□□□□ -0.43
NPLOC4-218ENST00000574964 GSX2Q9BZM3 304 aa12.37□□□□□ -0.43
NPLOC4-218ENST00000574964 EGLN1Q9GZT9 426 aa12.37□□□□□ -0.43
NPLOC4-218ENST00000574964 PLEKHA1Q9HB21 404 aa12.37□□□□□ -0.43
NPLOC4-218ENST00000574964 BARX1Q9HBU1 254 aaPredicted RBP12.37□□□□□ -0.43
NPLOC4-218ENST00000574964 MRPL15Q9P015 296 aaKnown RBP12.37□□□□□ -0.43
NPLOC4-218ENST00000574964 PIGLQ9Y2B2 252 aa12.37□□□□□ -0.43
NPLOC4-218ENST00000574964 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.36□□□□□ -0.43
NPLOC4-218ENST00000574964 A0A1B0GTI1 187 aa12.36□□□□□ -0.43
NPLOC4-218ENST00000574964 LOC107986453A0A1B0GWG9 222 aa12.36□□□□□ -0.43
NPLOC4-218ENST00000574964 TMEM212A6NML5 194 aa12.36□□□□□ -0.43
NPLOC4-218ENST00000574964 OR4C45A6NMZ5 311 aa12.36□□□□□ -0.43
NPLOC4-218ENST00000574964 MRPS14O60783 128 aaKnown RBP12.36□□□□□ -0.43
NPLOC4-218ENST00000574964 LILRA1O75019 489 aa12.36□□□□□ -0.43
NPLOC4-218ENST00000574964 NDUFS7O75251 213 aa12.36□□□□□ -0.43
NPLOC4-218ENST00000574964 IGLV3-1P01715 115 aa12.36□□□□□ -0.43
NPLOC4-218ENST00000574964 HLA-DPB1P04440 258 aa12.36□□□□□ -0.43
NPLOC4-218ENST00000574964 RPSAP08865 295 aaKnown RBP12.36□□□□□ -0.43
NPLOC4-218ENST00000574964 ACHEP22303 614 aa12.36□□□□□ -0.43
NPLOC4-218ENST00000574964 MAGEB1P43366 347 aa12.36□□□□□ -0.43
NPLOC4-218ENST00000574964 CCL8P80075 99 aa12.36□□□□□ -0.43
NPLOC4-218ENST00000574964 IRF3Q14653 427 aa12.36□□□□□ -0.43
NPLOC4-218ENST00000574964 CDK5R1Q15078 307 aa12.36□□□□□ -0.43
NPLOC4-218ENST00000574964 SPHARQ15513 63 aa12.36□□□□□ -0.43
NPLOC4-218ENST00000574964 Q6ZR03 302 aa12.36□□□□□ -0.43
NPLOC4-218ENST00000574964 LRRC75A-AS1Q8N1F1 130 aa12.36□□□□□ -0.43
NPLOC4-218ENST00000574964 SVOPQ8N4V2 548 aa12.36□□□□□ -0.43
NPLOC4-218ENST00000574964 ZFP41Q8N8Y5 198 aa12.36□□□□□ -0.43
NPLOC4-218ENST00000574964 OR8S1Q8NH09 359 aa12.36□□□□□ -0.43
NPLOC4-218ENST00000574964 RNF166Q96A37 237 aaPredicted RBP12.36□□□□□ -0.43
NPLOC4-218ENST00000574964 ENPP5Q9UJA9 477 aa12.36□□□□□ -0.43
NPLOC4-218ENST00000574964 HHLA2Q9UM44 414 aa12.36□□□□□ -0.43
NPLOC4-218ENST00000574964 PRRC2AP48634 2157 aaKnown RBP12.36□□□□□ -0.43
NPLOC4-218ENST00000574964 FBN2P35556 2912 aa12.35□□□□□ -0.43
NPLOC4-218ENST00000574964 ZNF816-ZNF321PA0A0X1KG74 233 aa12.35□□□□□ -0.43
NPLOC4-218ENST00000574964 PNMA8CA0A1B0GUJ8 204 aa12.35□□□□□ -0.43
NPLOC4-218ENST00000574964 LOC390937A0A1W2PQ73 354 aa12.35□□□□□ -0.43
NPLOC4-218ENST00000574964 ANXA2P2A6NMY6 339 aa12.35□□□□□ -0.43
NPLOC4-218ENST00000574964 SSX4O60224 188 aa12.35□□□□□ -0.43
NPLOC4-218ENST00000574964 GMDSO60547 372 aa12.35□□□□□ -0.43
NPLOC4-218ENST00000574964 LALBAP00709 142 aa12.35□□□□□ -0.43
NPLOC4-218ENST00000574964 F12P00748 615 aaPredicted RBP12.35□□□□□ -0.43
NPLOC4-218ENST00000574964 HSMCR30P0CW71 290 aa12.35□□□□□ -0.43
NPLOC4-218ENST00000574964 PAX1P15863 534 aa12.35□□□□□ -0.43
NPLOC4-218ENST00000574964 CCL1P22362 96 aa12.35□□□□□ -0.43
NPLOC4-218ENST00000574964 ACKR3P25106 362 aa12.35□□□□□ -0.43
NPLOC4-218ENST00000574964 SRP9P49458 86 aaKnown RBP12.35□□□□□ -0.43
NPLOC4-218ENST00000574964 CHN2P52757 468 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms