RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 KLHDC2Q9Y2U9 406 aa11.46□□□□□ -0.57
RAB40B-204ENST00000571554 NOP16Q9Y3C1 178 aaKnown RBP11.46□□□□□ -0.57
RAB40B-204ENST00000571554 TMEM89A2RUT3 159 aa11.45□□□□□ -0.58
RAB40B-204ENST00000571554 ARRDC5A6NEK1 342 aa11.45□□□□□ -0.58
RAB40B-204ENST00000571554 ANKRD30BLA7E2S9 258 aa11.45□□□□□ -0.58
RAB40B-204ENST00000571554 LGALS8O00214 317 aa11.45□□□□□ -0.58
RAB40B-204ENST00000571554 ADAM20O43506 726 aa11.45□□□□□ -0.58
RAB40B-204ENST00000571554 FKBP6O75344 327 aa11.45□□□□□ -0.58
RAB40B-204ENST00000571554 GYPAP02724 150 aa11.45□□□□□ -0.58
RAB40B-204ENST00000571554 H2BFMP0C1H6 154 aa11.45□□□□□ -0.58
RAB40B-204ENST00000571554 PAICSP22234 425 aaKnown RBP11.45□□□□□ -0.58
RAB40B-204ENST00000571554 BLVRAP53004 296 aa11.45□□□□□ -0.58
RAB40B-204ENST00000571554 FGF12P61328 243 aa11.45□□□□□ -0.58
RAB40B-204ENST00000571554 RPS7P62081 194 aaKnown RBP11.45□□□□□ -0.58
RAB40B-204ENST00000571554 CSNK2BP67870 215 aa11.45□□□□□ -0.58
RAB40B-204ENST00000571554 ELF3P78545 371 aaPredicted RBP11.45□□□□□ -0.58
RAB40B-204ENST00000571554 LRRN1Q6UXK5 716 aa11.45□□□□□ -0.58
RAB40B-204ENST00000571554 PRSS45Q7RTY3 260 aa11.45□□□□□ -0.58
RAB40B-204ENST00000571554 WDR86Q86TI4 376 aa11.45□□□□□ -0.58
RAB40B-204ENST00000571554 CPOQ8IVL8 374 aa11.45□□□□□ -0.58
RAB40B-204ENST00000571554 C3orf56Q8N813 242 aa11.45□□□□□ -0.58
RAB40B-204ENST00000571554 OR8S1Q8NH09 359 aa11.45□□□□□ -0.58
RAB40B-204ENST00000571554 THEM6Q8WUY1 208 aa11.45□□□□□ -0.58
RAB40B-204ENST00000571554 SPSB4Q96A44 273 aa11.45□□□□□ -0.58
RAB40B-204ENST00000571554 DACT3Q96B18 629 aaPredicted RBP11.45□□□□□ -0.58
RAB40B-204ENST00000571554 SLC7A6OSQ96CW6 309 aaPredicted RBP11.45□□□□□ -0.58
RAB40B-204ENST00000571554 PGAM5Q96HS1 289 aa11.45□□□□□ -0.58
RAB40B-204ENST00000571554 C1orf147Q96MC9 270 aaPredicted RBP11.45□□□□□ -0.58
RAB40B-204ENST00000571554 MARCH7Q9H992 704 aa11.45□□□□□ -0.58
RAB40B-204ENST00000571554 ZNF556Q9HAH1 456 aa11.45□□□□□ -0.58
RAB40B-204ENST00000571554 NTN4Q9HB63 628 aa11.45□□□□□ -0.58
RAB40B-204ENST00000571554 SMURF1Q9HCE7 757 aa11.45□□□□□ -0.58
RAB40B-204ENST00000571554 NBEAL1Q6ZS30 2694 aa11.44□□□□□ -0.58
RAB40B-204ENST00000571554 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.44□□□□□ -0.58
RAB40B-204ENST00000571554 hCG_38984A0A1B0GV85 526 aa11.44□□□□□ -0.58
RAB40B-204ENST00000571554 PTBP3O95758 552 aaKnown RBP11.44□□□□□ -0.58
RAB40B-204ENST00000571554 LYNP07948 512 aa11.44□□□□□ -0.58
RAB40B-204ENST00000571554 OSMP13725 252 aa11.44□□□□□ -0.58
RAB40B-204ENST00000571554 OPRL1P41146 370 aa11.44□□□□□ -0.58
RAB40B-204ENST00000571554 GSK3AP49840 483 aa11.44□□□□□ -0.58
RAB40B-204ENST00000571554 HCCSP53701 268 aa11.44□□□□□ -0.58
RAB40B-204ENST00000571554 GMFBP60983 142 aa11.44□□□□□ -0.58
RAB40B-204ENST00000571554 BAMBIQ13145 260 aa11.44□□□□□ -0.58
RAB40B-204ENST00000571554 GK3PQ14409 553 aa11.44□□□□□ -0.58
RAB40B-204ENST00000571554 DNAL1Q4LDG9 190 aa11.44□□□□□ -0.58
RAB40B-204ENST00000571554 BRD3OSQ6XYD6 125 aa11.44□□□□□ -0.58
RAB40B-204ENST00000571554 DOK3Q7L591 496 aa11.44□□□□□ -0.58
RAB40B-204ENST00000571554 SHFQ7M4L6 423 aa11.44□□□□□ -0.58
RAB40B-204ENST00000571554 FGFRL1Q8N441 504 aa11.44□□□□□ -0.58
RAB40B-204ENST00000571554 GCSAMQ8N6F7 178 aa11.44□□□□□ -0.58
RAB40B-204ENST00000571554 UPRTQ96BW1 309 aa11.44□□□□□ -0.58
RAB40B-204ENST00000571554 TTTY10Q9BZA0 68 aa11.44□□□□□ -0.58
RAB40B-204ENST00000571554 TOR3AQ9H497 397 aa11.44□□□□□ -0.58
RAB40B-204ENST00000571554 OPA3Q9H6K4 179 aa11.44□□□□□ -0.58
RAB40B-204ENST00000571554 POMPQ9Y244 141 aa11.44□□□□□ -0.58
RAB40B-204ENST00000571554 KIR2DS1A0A191URI9 304 aa11.43□□□□□ -0.58
RAB40B-204ENST00000571554 A0A1B0GW55 424 aa11.43□□□□□ -0.58
RAB40B-204ENST00000571554 TCRBV3S1A0A5B6 114 aa11.43□□□□□ -0.58
RAB40B-204ENST00000571554 OOEPA6NGQ2 149 aa11.43□□□□□ -0.58
RAB40B-204ENST00000571554 PSMD9O00233 223 aa11.43□□□□□ -0.58
RAB40B-204ENST00000571554 PHYHO14832 338 aa11.43□□□□□ -0.58
RAB40B-204ENST00000571554 FCN3O75636 299 aa11.43□□□□□ -0.58
RAB40B-204ENST00000571554 TIPRLO75663 272 aa11.43□□□□□ -0.58
RAB40B-204ENST00000571554 FSTL3O95633 263 aa11.43□□□□□ -0.58
RAB40B-204ENST00000571554 SFTPBP07988 381 aa11.43□□□□□ -0.58
RAB40B-204ENST00000571554 MRPL3P09001 348 aaKnown RBP11.43□□□□□ -0.58
RAB40B-204ENST00000571554 DUX4L2P0CJ85 424 aa11.43□□□□□ -0.58
RAB40B-204ENST00000571554 DUX4L3P0CJ86 424 aa11.43□□□□□ -0.58
RAB40B-204ENST00000571554 DUX4L4P0CJ87 422 aa11.43□□□□□ -0.58
RAB40B-204ENST00000571554 DUX4L5P0CJ88 424 aa11.43□□□□□ -0.58
RAB40B-204ENST00000571554 DUX4L6P0CJ89 424 aa11.43□□□□□ -0.58
RAB40B-204ENST00000571554 DUX4L7P0CJ90 424 aa11.43□□□□□ -0.58
RAB40B-204ENST00000571554 PSMB10P40306 273 aa11.43□□□□□ -0.58
RAB40B-204ENST00000571554 CDK5Q00535 292 aa11.43□□□□□ -0.58
RAB40B-204ENST00000571554 AWAT1Q58HT5 328 aa11.43□□□□□ -0.58
RAB40B-204ENST00000571554 RUSC1-AS1Q66K80 236 aa11.43□□□□□ -0.58
RAB40B-204ENST00000571554 DUX4L9Q6RFH8 374 aaPredicted RBP11.43□□□□□ -0.58
RAB40B-204ENST00000571554 FAM90A1Q86YD7 464 aa11.43□□□□□ -0.58
RAB40B-204ENST00000571554 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.43□□□□□ -0.58
RAB40B-204ENST00000571554 OTOSQ8NHW6 89 aa11.43□□□□□ -0.58
RAB40B-204ENST00000571554 LRRC29Q8WV35 223 aa11.43□□□□□ -0.58
RAB40B-204ENST00000571554 SEH1LQ96EE3 360 aa11.43□□□□□ -0.58
RAB40B-204ENST00000571554 PCGF1Q9BSM1 259 aa11.43□□□□□ -0.58
RAB40B-204ENST00000571554 PAPOLGQ9BWT3 736 aaKnown RBP11.43□□□□□ -0.58
RAB40B-204ENST00000571554 OR10A2Q9H208 303 aa11.43□□□□□ -0.58
RAB40B-204ENST00000571554 C14orf119Q9NWQ9 140 aa11.43□□□□□ -0.58
RAB40B-204ENST00000571554 KIF17Q9P2E2 1029 aa11.43□□□□□ -0.58
RAB40B-204ENST00000571554 ERVK-18Q9QC07 812 aa11.43□□□□□ -0.58
RAB40B-204ENST00000571554 DUX4Q9UBX2 424 aa11.43□□□□□ -0.58
RAB40B-204ENST00000571554 RHBDD3Q9Y3P4 386 aa11.43□□□□□ -0.58
RAB40B-204ENST00000571554 TRAV38-1A0A0B4J264 116 aa11.42□□□□□ -0.58
RAB40B-204ENST00000571554 M0R129 80 aa11.42□□□□□ -0.58
RAB40B-204ENST00000571554 ENSAO43768 121 aaKnown RBP11.42□□□□□ -0.58
RAB40B-204ENST00000571554 DNAJC8O75937 253 aaPredicted RBP11.42□□□□□ -0.58
RAB40B-204ENST00000571554 HMGN1P05114 100 aa11.42□□□□□ -0.58
RAB40B-204ENST00000571554 ANXA8P13928 327 aa11.42□□□□□ -0.58
RAB40B-204ENST00000571554 PRTN3P24158 256 aa11.42□□□□□ -0.58
RAB40B-204ENST00000571554 GNALP38405 381 aa11.42□□□□□ -0.58
RAB40B-204ENST00000571554 DDOSTP39656 456 aa11.42□□□□□ -0.58
RAB40B-204ENST00000571554 COMPP49747 757 aaPredicted RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms