RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 PRRG3Q9BZD7 231 aa16.98■□□□□ 0.31
CLK3-225ENST00000569063 YIPF3Q9GZM5 350 aa16.98■□□□□ 0.31
CLK3-225ENST00000569063 GABARAPL1Q9H0R8 117 aa16.98■□□□□ 0.31
CLK3-225ENST00000569063 NIPAL2Q9H841 368 aa16.98■□□□□ 0.31
CLK3-225ENST00000569063 C14orf119Q9NWQ9 140 aa16.98■□□□□ 0.31
CLK3-225ENST00000569063 RNF7Q9UBF6 113 aa16.98■□□□□ 0.31
CLK3-225ENST00000569063 INSIG2Q9Y5U4 225 aa16.98■□□□□ 0.31
CLK3-225ENST00000569063 CCDC182A6NF36 153 aa16.97■□□□□ 0.31
CLK3-225ENST00000569063 PRKYO43930 277 aa16.97■□□□□ 0.31
CLK3-225ENST00000569063 MITFO75030 526 aaPredicted RBP16.97■□□□□ 0.31
CLK3-225ENST00000569063 GSK3AP49840 483 aa16.97■□□□□ 0.31
CLK3-225ENST00000569063 EFNB1P98172 346 aa16.97■□□□□ 0.31
CLK3-225ENST00000569063 SLX4IPQ5VYV7 408 aa16.97■□□□□ 0.31
CLK3-225ENST00000569063 DCDC5Q6ZRR9 648 aa16.97■□□□□ 0.31
CLK3-225ENST00000569063 ASRGL1Q7L266 308 aa16.97■□□□□ 0.31
CLK3-225ENST00000569063 AMIGO2Q86SJ2 522 aa16.97■□□□□ 0.31
CLK3-225ENST00000569063 LRTOMTQ8WZ04 291 aa16.97■□□□□ 0.31
CLK3-225ENST00000569063 NEIL1Q96FI4 390 aaPredicted RBP16.97■□□□□ 0.31
CLK3-225ENST00000569063 PGAM5Q96HS1 289 aa16.97■□□□□ 0.31
CLK3-225ENST00000569063 BRD7Q9NPI1 651 aa16.97■□□□□ 0.31
CLK3-225ENST00000569063 OR5V1Q9UGF6 321 aa16.97■□□□□ 0.31
CLK3-225ENST00000569063 LAMP5Q9UJQ1 280 aa16.97■□□□□ 0.31
CLK3-225ENST00000569063 ZAR1LA6NP61 321 aa16.96■□□□□ 0.31
CLK3-225ENST00000569063 HCCSP53701 268 aa16.96■□□□□ 0.31
CLK3-225ENST00000569063 PSMA6P60900 246 aaKnown RBP16.96■□□□□ 0.31
CLK3-225ENST00000569063 GNB2P62879 340 aa16.96■□□□□ 0.31
CLK3-225ENST00000569063 PAX2Q02962 417 aa16.96■□□□□ 0.31
CLK3-225ENST00000569063 OR8B8Q15620 311 aa16.96■□□□□ 0.31
CLK3-225ENST00000569063 LCN1P1Q5VSP4 162 aa16.96■□□□□ 0.31
CLK3-225ENST00000569063 DEGS2Q6QHC5 323 aa16.96■□□□□ 0.31
CLK3-225ENST00000569063 LRRN1Q6UXK5 716 aa16.96■□□□□ 0.31
CLK3-225ENST00000569063 USP43Q70EL4 1123 aa16.96■□□□□ 0.31
CLK3-225ENST00000569063 NLRC3Q7RTR2 1065 aa16.96■□□□□ 0.31
CLK3-225ENST00000569063 CSNK2A3Q8NEV1 391 aa16.96■□□□□ 0.31
CLK3-225ENST00000569063 ZNF418Q8TF45 676 aaPredicted RBP16.96■□□□□ 0.31
CLK3-225ENST00000569063 ENOPH1Q9UHY7 261 aa16.96■□□□□ 0.31
CLK3-225ENST00000569063 LRP12Q9Y561 859 aa16.96■□□□□ 0.31
CLK3-225ENST00000569063 AUP1Q9Y679 476 aa16.96■□□□□ 0.31
CLK3-225ENST00000569063 ARHGAP32A7KAX9 2087 aa16.96■□□□□ 0.31
CLK3-225ENST00000569063 CIB2O75838 187 aa16.95■□□□□ 0.3
CLK3-225ENST00000569063 GRPP07492 148 aa16.95■□□□□ 0.3
CLK3-225ENST00000569063 EPHA2P29317 976 aa16.95■□□□□ 0.3
CLK3-225ENST00000569063 SNCBQ16143 134 aa16.95■□□□□ 0.3
CLK3-225ENST00000569063 GFOD2Q3B7J2 385 aa16.95■□□□□ 0.3
CLK3-225ENST00000569063 C12orf73Q69YU5 71 aa16.95■□□□□ 0.3
CLK3-225ENST00000569063 KCTD18Q6PI47 426 aaPredicted RBP16.95■□□□□ 0.3
CLK3-225ENST00000569063 KRT77Q7Z794 578 aa16.95■□□□□ 0.3
CLK3-225ENST00000569063 C19orf18Q8NEA5 215 aa16.95■□□□□ 0.3
CLK3-225ENST00000569063 SEMA6DQ8NFY4 1073 aa16.95■□□□□ 0.3
CLK3-225ENST00000569063 OR8B3Q8NGG8 313 aa16.95■□□□□ 0.3
CLK3-225ENST00000569063 OR8S1Q8NH09 359 aa16.95■□□□□ 0.3
CLK3-225ENST00000569063 OR8B2Q96RD0 313 aa16.95■□□□□ 0.3
CLK3-225ENST00000569063 C1orf123Q9NWV4 160 aa16.95■□□□□ 0.3
CLK3-225ENST00000569063 ZNF391Q9UJN7 358 aa16.95■□□□□ 0.3
CLK3-225ENST00000569063 LGALS8O00214 317 aa16.94■□□□□ 0.3
CLK3-225ENST00000569063 VENTXO95231 258 aa16.94■□□□□ 0.3
CLK3-225ENST00000569063 PSMB10P40306 273 aa16.94■□□□□ 0.3
CLK3-225ENST00000569063 PITPNBP48739 271 aa16.94■□□□□ 0.3
CLK3-225ENST00000569063 ROM1Q03395 351 aa16.94■□□□□ 0.3
CLK3-225ENST00000569063 PAX8Q06710 450 aa16.94■□□□□ 0.3
CLK3-225ENST00000569063 KCNJ8Q15842 424 aa16.94■□□□□ 0.3
CLK3-225ENST00000569063 AADACL4Q5VUY2 407 aa16.94■□□□□ 0.3
CLK3-225ENST00000569063 NXNL2Q5VZ03 156 aa16.94■□□□□ 0.3
CLK3-225ENST00000569063 LYPD2Q6UXB3 125 aa16.94■□□□□ 0.3
CLK3-225ENST00000569063 MEPCEQ7L2J0 689 aaKnown RBP16.94■□□□□ 0.3
CLK3-225ENST00000569063 FTMTQ8N4E7 242 aa16.94■□□□□ 0.3
CLK3-225ENST00000569063 ZFAND2BQ8WV99 257 aa16.94■□□□□ 0.3
CLK3-225ENST00000569063 DACT3Q96B18 629 aaPredicted RBP16.94■□□□□ 0.3
CLK3-225ENST00000569063 CENPNQ96H22 339 aaPredicted RBP16.94■□□□□ 0.3
CLK3-225ENST00000569063 MRI1Q9BV20 369 aa16.94■□□□□ 0.3
CLK3-225ENST00000569063 TRIM36Q9NQ86 728 aa16.94■□□□□ 0.3
CLK3-225ENST00000569063 RHBDD3Q9Y3P4 386 aa16.94■□□□□ 0.3
CLK3-225ENST00000569063 TMEM14AQ9Y6G1 99 aa16.94■□□□□ 0.3
CLK3-225ENST00000569063 ACOD1A6NK06 481 aa16.93■□□□□ 0.3
CLK3-225ENST00000569063 A6NLC8 198 aa16.93■□□□□ 0.3
CLK3-225ENST00000569063 TNFRSF13BO14836 293 aaPredicted RBP16.93■□□□□ 0.3
CLK3-225ENST00000569063 LHBP01229 141 aa16.93■□□□□ 0.3
CLK3-225ENST00000569063 MRPL3P09001 348 aaKnown RBP16.93■□□□□ 0.3
CLK3-225ENST00000569063 DCTDP32321 178 aa16.93■□□□□ 0.3
CLK3-225ENST00000569063 CD80P33681 288 aa16.93■□□□□ 0.3
CLK3-225ENST00000569063 HOXA4Q00056 320 aaPredicted RBP16.93■□□□□ 0.3
CLK3-225ENST00000569063 ZNF841Q6ZN19 808 aa16.93■□□□□ 0.3
CLK3-225ENST00000569063 WDR86Q86TI4 376 aa16.93■□□□□ 0.3
CLK3-225ENST00000569063 C11orf53Q8IXP5 236 aa16.93■□□□□ 0.3
CLK3-225ENST00000569063 TCEANCQ8N8B7 351 aa16.93■□□□□ 0.3
CLK3-225ENST00000569063 OR8B12Q8NGG6 310 aa16.93■□□□□ 0.3
CLK3-225ENST00000569063 TMEM163Q8TC26 289 aa16.93■□□□□ 0.3
CLK3-225ENST00000569063 RAB40AQ8WXH6 277 aa16.93■□□□□ 0.3
CLK3-225ENST00000569063 ASB17Q8WXJ9 295 aa16.93■□□□□ 0.3
CLK3-225ENST00000569063 LYZL4Q96KX0 146 aa16.93■□□□□ 0.3
CLK3-225ENST00000569063 CIB1Q99828 191 aa16.93■□□□□ 0.3
CLK3-225ENST00000569063 MROQ9BYG7 248 aa16.93■□□□□ 0.3
CLK3-225ENST00000569063 H2AFY2Q9P0M6 372 aaPredicted RBP16.93■□□□□ 0.3
CLK3-225ENST00000569063 TRAV38-1A0A0B4J264 116 aa16.92■□□□□ 0.3
CLK3-225ENST00000569063 IGHV2-70DA0A0C4DH43 119 aa16.92■□□□□ 0.3
CLK3-225ENST00000569063 OOEPA6NGQ2 149 aa16.92■□□□□ 0.3
CLK3-225ENST00000569063 SLC22A31A6NKX4 558 aa16.92■□□□□ 0.3
CLK3-225ENST00000569063 PHYHO14832 338 aa16.92■□□□□ 0.3
CLK3-225ENST00000569063 NDUFA2O43678 99 aa16.92■□□□□ 0.3
CLK3-225ENST00000569063 ZNF254O75437 659 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms