RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.51□□□□□ -0.57
CLK3-218ENST00000566926 RFLNBQ8N5W9 214 aa11.51□□□□□ -0.57
CLK3-218ENST00000566926 OR1J1Q8NGS3 322 aa11.51□□□□□ -0.57
CLK3-218ENST00000566926 RPS4Y2Q8TD47 263 aa11.51□□□□□ -0.57
CLK3-218ENST00000566926 C10orf105Q8TEF2 133 aa11.51□□□□□ -0.57
CLK3-218ENST00000566926 PHYHIPQ92561 330 aa11.51□□□□□ -0.57
CLK3-218ENST00000566926 SMR3AQ99954 134 aa11.51□□□□□ -0.57
CLK3-218ENST00000566926 SYT3Q9BQG1 590 aa11.51□□□□□ -0.57
CLK3-218ENST00000566926 PIMREGQ9BSJ6 248 aa11.51□□□□□ -0.57
CLK3-218ENST00000566926 OR51B6Q9H340 312 aa11.51□□□□□ -0.57
CLK3-218ENST00000566926 MOB1AQ9H8S9 216 aa11.51□□□□□ -0.57
CLK3-218ENST00000566926 EMC7Q9NPA0 242 aa11.51□□□□□ -0.57
CLK3-218ENST00000566926 TUBG2Q9NRH3 451 aa11.51□□□□□ -0.57
CLK3-218ENST00000566926 DDX28Q9NUL7 540 aaKnown RBP11.51□□□□□ -0.57
CLK3-218ENST00000566926 PLEK2Q9NYT0 353 aa11.51□□□□□ -0.57
CLK3-218ENST00000566926 ATPIF1Q9UII2 106 aa11.51□□□□□ -0.57
CLK3-218ENST00000566926 SSR3Q9UNL2 185 aa11.51□□□□□ -0.57
CLK3-218ENST00000566926 KLHDC2Q9Y2U9 406 aa11.51□□□□□ -0.57
CLK3-218ENST00000566926 LHFPL6Q9Y693 200 aa11.51□□□□□ -0.57
CLK3-218ENST00000566926 IGLV3-9A0A075B6K5 115 aa11.5□□□□□ -0.57
CLK3-218ENST00000566926 LOC100509620A0A075B734 347 aa11.5□□□□□ -0.57
CLK3-218ENST00000566926 TMEM212A6NML5 194 aa11.5□□□□□ -0.57
CLK3-218ENST00000566926 DOK2O60496 412 aa11.5□□□□□ -0.57
CLK3-218ENST00000566926 ICMTO60725 284 aa11.5□□□□□ -0.57
CLK3-218ENST00000566926 H2BFMP0C1H6 154 aa11.5□□□□□ -0.57
CLK3-218ENST00000566926 HTR5AP47898 357 aa11.5□□□□□ -0.57
CLK3-218ENST00000566926 HIST1H3AP68431 136 aa11.5□□□□□ -0.57
CLK3-218ENST00000566926 YIF1BQ5BJH7 314 aa11.5□□□□□ -0.57
CLK3-218ENST00000566926 HIST2H3PS2Q5TEC6 136 aa11.5□□□□□ -0.57
CLK3-218ENST00000566926 CD200R1LQ6Q8B3 271 aa11.5□□□□□ -0.57
CLK3-218ENST00000566926 HIST2H3AQ71DI3 136 aa11.5□□□□□ -0.57
CLK3-218ENST00000566926 C12orf43Q96C57 262 aaKnown RBP11.5□□□□□ -0.57
CLK3-218ENST00000566926 SLAMF6Q96DU3 332 aa11.5□□□□□ -0.57
CLK3-218ENST00000566926 C4orf45Q96LM5 186 aa11.5□□□□□ -0.57
CLK3-218ENST00000566926 FOXN4Q96NZ1 517 aa11.5□□□□□ -0.57
CLK3-218ENST00000566926 HDHD2Q9H0R4 259 aa11.5□□□□□ -0.57
CLK3-218ENST00000566926 TAAR3PQ9P1P4 343 aa11.5□□□□□ -0.57
CLK3-218ENST00000566926 GSTK1Q9Y2Q3 226 aa11.5□□□□□ -0.57
CLK3-218ENST00000566926 ZANQ9Y493 2812 aa11.49□□□□□ -0.57
CLK3-218ENST00000566926 TRBV2A0A0J9YWF9 115 aa11.49□□□□□ -0.57
CLK3-218ENST00000566926 TRDV1A0A1B0GX56 115 aa11.49□□□□□ -0.57
CLK3-218ENST00000566926 ACOD1A6NK06 481 aa11.49□□□□□ -0.57
CLK3-218ENST00000566926 LALBAP00709 142 aa11.49□□□□□ -0.57
CLK3-218ENST00000566926 DAOP14920 347 aa11.49□□□□□ -0.57
CLK3-218ENST00000566926 GADD45AP24522 165 aa11.49□□□□□ -0.57
CLK3-218ENST00000566926 FGF9P31371 208 aaPredicted RBP11.49□□□□□ -0.57
CLK3-218ENST00000566926 MMP16P51512 607 aa11.49□□□□□ -0.57
CLK3-218ENST00000566926 LOXL1Q08397 574 aaPredicted RBP11.49□□□□□ -0.57
CLK3-218ENST00000566926 TAF13Q15543 124 aa11.49□□□□□ -0.57
CLK3-218ENST00000566926 CARTPTQ16568 116 aa11.49□□□□□ -0.57
CLK3-218ENST00000566926 MSMPQ1L6U9 139 aa11.49□□□□□ -0.57
CLK3-218ENST00000566926 USP43Q70EL4 1123 aa11.49□□□□□ -0.57
CLK3-218ENST00000566926 LRP11Q86VZ4 500 aa11.49□□□□□ -0.57
CLK3-218ENST00000566926 LINC00346Q8IVM7 164 aa11.49□□□□□ -0.57
CLK3-218ENST00000566926 UBASH3BQ8TF42 649 aa11.49□□□□□ -0.57
CLK3-218ENST00000566926 MAP6Q96JE9 813 aa11.49□□□□□ -0.57
CLK3-218ENST00000566926 DCLRE1CQ96SD1 692 aaKnown RBP11.49□□□□□ -0.57
CLK3-218ENST00000566926 COMMD4Q9H0A8 199 aa11.49□□□□□ -0.57
CLK3-218ENST00000566926 SP140LQ9H930 580 aa11.49□□□□□ -0.57
CLK3-218ENST00000566926 TBCCD1Q9NVR7 557 aa11.49□□□□□ -0.57
CLK3-218ENST00000566926 PTTG2Q9NZH5 202 aa11.49□□□□□ -0.57
CLK3-218ENST00000566926 FZR1Q9UM11 496 aa11.49□□□□□ -0.57
CLK3-218ENST00000566926 LRP12Q9Y561 859 aa11.49□□□□□ -0.57
CLK3-218ENST00000566926 R4GMQ9 66 aa11.49□□□□□ -0.57
CLK3-218ENST00000566926 NAV3Q8IVL0 2385 aa11.49□□□□□ -0.57
CLK3-218ENST00000566926 NSD1Q96L73 2696 aaPredicted RBP11.48□□□□□ -0.57
CLK3-218ENST00000566926 OR6C6A6NF89 314 aa11.48□□□□□ -0.57
CLK3-218ENST00000566926 J3QW42 95 aa11.48□□□□□ -0.57
CLK3-218ENST00000566926 GATBO75879 557 aaKnown RBP11.48□□□□□ -0.57
CLK3-218ENST00000566926 RGS9O75916 674 aaPredicted RBP11.48□□□□□ -0.57
CLK3-218ENST00000566926 LY6HO94772 140 aa11.48□□□□□ -0.57
CLK3-218ENST00000566926 IGHV3-13P01766 116 aa11.48□□□□□ -0.57
CLK3-218ENST00000566926 PSKH1P11801 424 aa11.48□□□□□ -0.57
CLK3-218ENST00000566926 USF1P22415 310 aaPredicted RBP11.48□□□□□ -0.57
CLK3-218ENST00000566926 MAPK3P27361 379 aaPredicted RBP11.48□□□□□ -0.57
CLK3-218ENST00000566926 HSD11B1P28845 292 aa11.48□□□□□ -0.57
CLK3-218ENST00000566926 WNT5AP41221 380 aa11.48□□□□□ -0.57
CLK3-218ENST00000566926 RPS27P42677 84 aaKnown RBP11.48□□□□□ -0.57
CLK3-218ENST00000566926 CRYBB2P43320 205 aa11.48□□□□□ -0.57
CLK3-218ENST00000566926 ALDH3B1P43353 468 aa11.48□□□□□ -0.57
CLK3-218ENST00000566926 PSMA6P60900 246 aaKnown RBP11.48□□□□□ -0.57
CLK3-218ENST00000566926 PPP1CBP62140 327 aa11.48□□□□□ -0.57
CLK3-218ENST00000566926 ALKBH1Q13686 389 aaKnown RBP11.48□□□□□ -0.57
CLK3-218ENST00000566926 CNPY1Q3B7I2 92 aa11.48□□□□□ -0.57
CLK3-218ENST00000566926 PCGF3Q3KNV8 242 aa11.48□□□□□ -0.57
CLK3-218ENST00000566926 ELFN2Q5R3F8 820 aa11.48□□□□□ -0.57
CLK3-218ENST00000566926 MBNL2Q5VZF2 373 aaKnown RBP11.48□□□□□ -0.57
CLK3-218ENST00000566926 LRRN1Q6UXK5 716 aa11.48□□□□□ -0.57
CLK3-218ENST00000566926 ZCCHC24Q8N2G6 241 aaKnown RBP11.48□□□□□ -0.57
CLK3-218ENST00000566926 OR2G2Q8NGZ5 317 aa11.48□□□□□ -0.57
CLK3-218ENST00000566926 OR1F12Q8NHA8 337 aa11.48□□□□□ -0.57
CLK3-218ENST00000566926 ABHD4Q8TB40 342 aa11.48□□□□□ -0.57
CLK3-218ENST00000566926 GHSRQ92847 366 aa11.48□□□□□ -0.57
CLK3-218ENST00000566926 SPTSSAQ969W0 71 aa11.48□□□□□ -0.57
CLK3-218ENST00000566926 PGLYRP3Q96LB9 341 aa11.48□□□□□ -0.57
CLK3-218ENST00000566926 KCTD7Q96MP8 289 aa11.48□□□□□ -0.57
CLK3-218ENST00000566926 AMELYQ99218 206 aa11.48□□□□□ -0.57
CLK3-218ENST00000566926 ATF6BQ99941 703 aa11.48□□□□□ -0.57
CLK3-218ENST00000566926 CHCHD6Q9BRQ6 235 aa11.48□□□□□ -0.57
CLK3-218ENST00000566926 TPK1Q9H3S4 243 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms