RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 RNF215Q9Y6U7 377 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 PLXNA2O75051 1894 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 ZNF207O43670 478 aaKnown RBP3.02□□□□□ -1.93
CHD9-213ENST00000564845 HEXBP07686 556 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 SLC35E2P0CK97 266 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 PRF1P14222 555 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 SLC6A9P48067 706 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 GIPRP48546 466 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 MTNR1BP49286 362 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 PRDX1Q06830 199 aaKnown RBP3.02□□□□□ -1.93
CHD9-213ENST00000564845 SMAD4Q13485 552 aaKnown RBP3.02□□□□□ -1.93
CHD9-213ENST00000564845 CD226Q15762 336 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 BATFQ16520 125 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 ATP6V1FQ16864 119 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 ZNF684Q5T5D7 378 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 RPL7L1Q6DKI1 246 aaKnown RBP3.02□□□□□ -1.93
CHD9-213ENST00000564845 C17orf78Q8N4C9 275 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 SIRT6Q8N6T7 355 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 HLA-CQ95604 372 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 MS4A3Q96HJ5 214 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 COX14Q96I36 57 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 OR14A2Q96R54 314 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 GAL3ST2Q9H3Q3 398 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 PRTFDC1Q9NRG1 225 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 CDC42EP3Q9UKI2 254 aa3.02□□□□□ -1.93
CHD9-213ENST00000564845 LOC102724200A0A096LPH7 203 aaPredicted RBP3.01□□□□□ -1.93
CHD9-213ENST00000564845 A0A1W2PR80 420 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 H3BQ85 93 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 PYCARD-AS1I3L0S3 204 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 LMX1BO60663 402 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 PRB4P10163 310 aaPredicted RBP3.01□□□□□ -1.93
CHD9-213ENST00000564845 CCL2P13500 99 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 MYF6P23409 242 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 PYCR1P32322 319 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 PNLIPRP2P54317 469 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 CMC4P56277 68 aaPredicted RBP3.01□□□□□ -1.93
CHD9-213ENST00000564845 ACOT6Q3I5F7 207 aaPredicted RBP3.01□□□□□ -1.93
CHD9-213ENST00000564845 Q3ZCU0 254 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 TP53I3Q53FA7 332 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 ZNF766Q5HY98 468 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 CLEC18BQ6UXF7 455 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 LYSMD2Q8IV50 215 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 SPEM1Q8N4L4 309 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 ASB5Q8WWX0 329 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 NMNAT3Q96T66 252 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 S1PR3Q99500 378 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 DDX31Q9H8H2 851 aaKnown RBP3.01□□□□□ -1.93
CHD9-213ENST00000564845 BARX1Q9HBU1 254 aaPredicted RBP3.01□□□□□ -1.93
CHD9-213ENST00000564845 OR6C6A6NF89 314 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 OR2J2O76002 312 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 ZNF883P0CG24 379 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 OR5H8P0DN80 308 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 XCR1P46094 333 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 CSNK1A1P48729 337 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 SNRPGP62308 76 aaKnown RBP3.01□□□□□ -1.93
CHD9-213ENST00000564845 PEA15Q15121 130 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 C14orf28Q4W4Y0 310 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 ARSJQ5FYB0 599 aaPredicted RBP3.01□□□□□ -1.93
CHD9-213ENST00000564845 RNFT1Q5M7Z0 435 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 NAA40Q86UY6 237 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 COMMD7Q86VX2 200 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 PPP1R3BQ86XI6 285 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 UEVLDQ8IX04 471 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 SLC25A45Q8N413 288 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 SEMA6DQ8NFY4 1073 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 OR52N1Q8NH53 320 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 MED30Q96HR3 178 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 NDUFB11Q9NX14 153 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 CMAHPQ9Y471 501 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 SIRT4Q9Y6E7 314 aaPredicted RBP3.01□□□□□ -1.93
CHD9-213ENST00000564845 OR2F2O95006 317 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 KNG1P01042 644 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 PGA3P0DJD8 388 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 CELP19835 753 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 M6PRP20645 277 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 GDI2P50395 445 aaKnown RBP3.01□□□□□ -1.93
CHD9-213ENST00000564845 BTG1P62324 171 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 OR2F1Q13607 317 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 MPPED2Q15777 294 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 SLC16A13Q7RTY0 426 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 OR6N1Q8NGY5 312 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 FBN2P35556 2912 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 MDC1Q14676 2089 aaKnown RBP3.01□□□□□ -1.93
CHD9-213ENST00000564845 FAM74A7A6NL05 159 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 AQP7P3A6NL99 342 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 CDAP32320 146 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 SNRPD2P62316 118 aaKnown RBP3.01□□□□□ -1.93
CHD9-213ENST00000564845 SRSF2Q01130 221 aaKnown RBP3.01□□□□□ -1.93
CHD9-213ENST00000564845 TMEM267Q0VDI3 215 aaPredicted RBP3.01□□□□□ -1.93
CHD9-213ENST00000564845 ZNF691Q5VV52 312 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 GGNBP1Q5YKI7 109 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 WDR73Q6P4I2 378 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 ZNF836Q6ZNA1 936 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 FAM90A1Q86YD7 464 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 ZADH2Q8N4Q0 377 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 DTWD2Q8NBA8 298 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 OR10R2Q8NGX6 335 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 OR1L1Q8NH94 360 aa3.01□□□□□ -1.93
CHD9-213ENST00000564845 BAHD1Q8TBE0 780 aaPredicted RBP3.01□□□□□ -1.93
CHD9-213ENST00000564845 FBLIM1Q8WUP2 373 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms