RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 AMELYQ99218 206 aa8.57□□□□□ -1.04
CLK3-205ENST00000561673 NUDT16L1Q9BRJ7 211 aaKnown RBP8.57□□□□□ -1.04
CLK3-205ENST00000561673 TOR3AQ9H497 397 aa8.57□□□□□ -1.04
CLK3-205ENST00000561673 MARCH7Q9H992 704 aa8.57□□□□□ -1.04
CLK3-205ENST00000561673 C1orf123Q9NWV4 160 aa8.57□□□□□ -1.04
CLK3-205ENST00000561673 DNAJC27Q9NZQ0 273 aa8.57□□□□□ -1.04
CLK3-205ENST00000561673 ZNF319Q9P2F9 582 aa8.57□□□□□ -1.04
CLK3-205ENST00000561673 CLN8Q9UBY8 286 aa8.57□□□□□ -1.04
CLK3-205ENST00000561673 SOX21Q9Y651 276 aaPredicted RBP8.57□□□□□ -1.04
CLK3-205ENST00000561673 ANKRD30BLA7E2S9 258 aa8.56□□□□□ -1.04
CLK3-205ENST00000561673 C22orf46C9J442 243 aa8.56□□□□□ -1.04
CLK3-205ENST00000561673 PRR23D1E9PI22 279 aaPredicted RBP8.56□□□□□ -1.04
CLK3-205ENST00000561673 LGALS8O00214 317 aa8.56□□□□□ -1.04
CLK3-205ENST00000561673 PHYHO14832 338 aa8.56□□□□□ -1.04
CLK3-205ENST00000561673 E2F6O75461 281 aa8.56□□□□□ -1.04
CLK3-205ENST00000561673 LHBP01229 141 aa8.56□□□□□ -1.04
CLK3-205ENST00000561673 HMGN1P05114 100 aa8.56□□□□□ -1.04
CLK3-205ENST00000561673 PRR23D2P0DMB1 279 aaPredicted RBP8.56□□□□□ -1.04
CLK3-205ENST00000561673 OSMP13725 252 aa8.56□□□□□ -1.04
CLK3-205ENST00000561673 HOXB6P17509 224 aaKnown RBP8.56□□□□□ -1.04
CLK3-205ENST00000561673 PAICSP22234 425 aaKnown RBP8.56□□□□□ -1.04
CLK3-205ENST00000561673 DDOSTP39656 456 aa8.56□□□□□ -1.04
CLK3-205ENST00000561673 GSK3AP49840 483 aa8.56□□□□□ -1.04
CLK3-205ENST00000561673 ZNF121P58317 390 aaPredicted RBP8.56□□□□□ -1.04
CLK3-205ENST00000561673 CDK5Q00535 292 aa8.56□□□□□ -1.04
CLK3-205ENST00000561673 BAMBIQ13145 260 aa8.56□□□□□ -1.04
CLK3-205ENST00000561673 OR8B8Q15620 311 aa8.56□□□□□ -1.04
CLK3-205ENST00000561673 KCNJ8Q15842 424 aa8.56□□□□□ -1.04
CLK3-205ENST00000561673 TIGD6Q17RP2 521 aa8.56□□□□□ -1.04
CLK3-205ENST00000561673 KLHL12Q53G59 568 aa8.56□□□□□ -1.04
CLK3-205ENST00000561673 PLBD1Q6P4A8 553 aa8.56□□□□□ -1.04
CLK3-205ENST00000561673 FAM57BQ71RH2 274 aa8.56□□□□□ -1.04
CLK3-205ENST00000561673 RHOUQ7L0Q8 258 aa8.56□□□□□ -1.04
CLK3-205ENST00000561673 SPATA24Q86W54 205 aa8.56□□□□□ -1.04
CLK3-205ENST00000561673 C11orf53Q8IXP5 236 aa8.56□□□□□ -1.04
CLK3-205ENST00000561673 PARP8Q8N3A8 854 aa8.56□□□□□ -1.04
CLK3-205ENST00000561673 C3orf56Q8N813 242 aa8.56□□□□□ -1.04
CLK3-205ENST00000561673 OR52H1Q8NGJ2 320 aa8.56□□□□□ -1.04
CLK3-205ENST00000561673 BCAS4Q8TDM0 211 aa8.56□□□□□ -1.04
CLK3-205ENST00000561673 UPRTQ96BW1 309 aa8.56□□□□□ -1.04
CLK3-205ENST00000561673 SLC7A6OSQ96CW6 309 aaPredicted RBP8.56□□□□□ -1.04
CLK3-205ENST00000561673 C1orf147Q96MC9 270 aaPredicted RBP8.56□□□□□ -1.04
CLK3-205ENST00000561673 MS4A7Q9GZW8 240 aaPredicted RBP8.56□□□□□ -1.04
CLK3-205ENST00000561673 MMADHCQ9H3L0 296 aaPredicted RBP8.56□□□□□ -1.04
CLK3-205ENST00000561673 PPP1R3EQ9H7J1 279 aa8.56□□□□□ -1.04
CLK3-205ENST00000561673 SP140LQ9H930 580 aa8.56□□□□□ -1.04
CLK3-205ENST00000561673 ZNF556Q9HAH1 456 aa8.56□□□□□ -1.04
CLK3-205ENST00000561673 BRD7Q9NPI1 651 aa8.56□□□□□ -1.04
CLK3-205ENST00000561673 FAM53CQ9NYF3 392 aa8.56□□□□□ -1.04
CLK3-205ENST00000561673 TRRAPQ9Y4A5 3859 aa8.55□□□□□ -1.04
CLK3-205ENST00000561673 TRAV38-1A0A0B4J264 116 aa8.55□□□□□ -1.04
CLK3-205ENST00000561673 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.55□□□□□ -1.04
CLK3-205ENST00000561673 hCG_38984A0A1B0GV85 526 aa8.55□□□□□ -1.04
CLK3-205ENST00000561673 TCRBV3S1A0A5B6 114 aa8.55□□□□□ -1.04
CLK3-205ENST00000561673 OOEPA6NGQ2 149 aa8.55□□□□□ -1.04
CLK3-205ENST00000561673 DNAJC9-AS1A6NH13 148 aa8.55□□□□□ -1.04
CLK3-205ENST00000561673 A6NLC8 198 aa8.55□□□□□ -1.04
CLK3-205ENST00000561673 SELENOFO60613 162 aa8.55□□□□□ -1.04
CLK3-205ENST00000561673 FKBP6O75344 327 aa8.55□□□□□ -1.04
CLK3-205ENST00000561673 PLATP00750 562 aa8.55□□□□□ -1.04
CLK3-205ENST00000561673 APOC1P02654 83 aa8.55□□□□□ -1.04
CLK3-205ENST00000561673 GYPAP02724 150 aa8.55□□□□□ -1.04
CLK3-205ENST00000561673 LYNP07948 512 aa8.55□□□□□ -1.04
CLK3-205ENST00000561673 H2BFMP0C1H6 154 aa8.55□□□□□ -1.04
CLK3-205ENST00000561673 PRTN3P24158 256 aa8.55□□□□□ -1.04
CLK3-205ENST00000561673 NPY4RP50391 375 aa8.55□□□□□ -1.04
CLK3-205ENST00000561673 FGF12P61328 243 aa8.55□□□□□ -1.04
CLK3-205ENST00000561673 CBX1P83916 185 aa8.55□□□□□ -1.04
CLK3-205ENST00000561673 MZT1Q08AG7 82 aa8.55□□□□□ -1.04
CLK3-205ENST00000561673 POU4F2Q12837 409 aa8.55□□□□□ -1.04
CLK3-205ENST00000561673 FLOT2Q14254 428 aa8.55□□□□□ -1.04
CLK3-205ENST00000561673 GFOD2Q3B7J2 385 aa8.55□□□□□ -1.04
CLK3-205ENST00000561673 DNAL1Q4LDG9 190 aa8.55□□□□□ -1.04
CLK3-205ENST00000561673 AWAT1Q58HT5 328 aa8.55□□□□□ -1.04
CLK3-205ENST00000561673 TMEM236Q5W0B7 351 aa8.55□□□□□ -1.04
CLK3-205ENST00000561673 C9orf139Q6ZV77 190 aa8.55□□□□□ -1.04
CLK3-205ENST00000561673 WDR86Q86TI4 376 aa8.55□□□□□ -1.04
CLK3-205ENST00000561673 CPOQ8IVL8 374 aa8.55□□□□□ -1.04
CLK3-205ENST00000561673 GCSAMQ8N6F7 178 aa8.55□□□□□ -1.04
CLK3-205ENST00000561673 PAPD5Q8NDF8 572 aaKnown RBP8.55□□□□□ -1.04
CLK3-205ENST00000561673 BBS1Q8NFJ9 593 aa8.55□□□□□ -1.04
CLK3-205ENST00000561673 OR8S1Q8NH09 359 aa8.55□□□□□ -1.04
CLK3-205ENST00000561673 OTOSQ8NHW6 89 aa8.55□□□□□ -1.04
CLK3-205ENST00000561673 THEM6Q8WUY1 208 aa8.55□□□□□ -1.04
CLK3-205ENST00000561673 TECTBQ96PL2 329 aa8.55□□□□□ -1.04
CLK3-205ENST00000561673 OR10A2Q9H208 303 aa8.55□□□□□ -1.04
CLK3-205ENST00000561673 RASSF4Q9H2L5 321 aa8.55□□□□□ -1.04
CLK3-205ENST00000561673 YY1AP1Q9H869 796 aa8.55□□□□□ -1.04
CLK3-205ENST00000561673 C14orf119Q9NWQ9 140 aa8.55□□□□□ -1.04
CLK3-205ENST00000561673 ERVK-18Q9QC07 812 aa8.55□□□□□ -1.04
CLK3-205ENST00000561673 CTSZQ9UBR2 303 aa8.55□□□□□ -1.04
CLK3-205ENST00000561673 DNAJB9Q9UBS3 223 aa8.55□□□□□ -1.04
CLK3-205ENST00000561673 POMPQ9Y244 141 aa8.55□□□□□ -1.04
CLK3-205ENST00000561673 RHBDD3Q9Y3P4 386 aa8.55□□□□□ -1.04
CLK3-205ENST00000561673 IGHV3OR15-7A0A075B7D8 119 aa8.54□□□□□ -1.04
CLK3-205ENST00000561673 hCG_1807616A0A1W2PRN6 198 aa8.54□□□□□ -1.04
CLK3-205ENST00000561673 ADAM20O43506 726 aa8.54□□□□□ -1.04
CLK3-205ENST00000561673 NDUFA2O43678 99 aa8.54□□□□□ -1.04
CLK3-205ENST00000561673 ENSAO43768 121 aaKnown RBP8.54□□□□□ -1.04
CLK3-205ENST00000561673 FCN3O75636 299 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms