RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 NUP50Q9UKX7 468 aa14.35□□□□□ -0.11
CDC42BPB-208ENST00000561271 IGHV3OR16-10A0A075B7F0 116 aa14.34□□□□□ -0.11
CDC42BPB-208ENST00000561271 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.34□□□□□ -0.11
CDC42BPB-208ENST00000561271 hCG_1807616A0A1W2PRN6 198 aa14.34□□□□□ -0.11
CDC42BPB-208ENST00000561271 ANKRD30BLA7E2S9 258 aa14.34□□□□□ -0.11
CDC42BPB-208ENST00000561271 C3orf80F5H4A9 247 aa14.34□□□□□ -0.11
CDC42BPB-208ENST00000561271 HMGN1P05114 100 aa14.34□□□□□ -0.11
CDC42BPB-208ENST00000561271 LYNP07948 512 aa14.34□□□□□ -0.11
CDC42BPB-208ENST00000561271 H2BFMP0C1H6 154 aa14.34□□□□□ -0.11
CDC42BPB-208ENST00000561271 FPR2P25090 351 aa14.34□□□□□ -0.11
CDC42BPB-208ENST00000561271 RPS7P62081 194 aaKnown RBP14.34□□□□□ -0.11
CDC42BPB-208ENST00000561271 PAX8Q06710 450 aa14.34□□□□□ -0.11
CDC42BPB-208ENST00000561271 OR8B8Q15620 311 aa14.34□□□□□ -0.11
CDC42BPB-208ENST00000561271 WDR25Q64LD2 544 aaPredicted RBP14.34□□□□□ -0.11
CDC42BPB-208ENST00000561271 BTNL3Q6UXE8 466 aa14.34□□□□□ -0.11
CDC42BPB-208ENST00000561271 WDR86Q86TI4 376 aa14.34□□□□□ -0.11
CDC42BPB-208ENST00000561271 BCL6BQ8N143 479 aaPredicted RBP14.34□□□□□ -0.11
CDC42BPB-208ENST00000561271 SIGLECL1Q8N7X8 197 aa14.34□□□□□ -0.11
CDC42BPB-208ENST00000561271 ZDHHC22Q8N966 263 aa14.34□□□□□ -0.11
CDC42BPB-208ENST00000561271 OR8S1Q8NH09 359 aa14.34□□□□□ -0.11
CDC42BPB-208ENST00000561271 OTOSQ8NHW6 89 aa14.34□□□□□ -0.11
CDC42BPB-208ENST00000561271 FAM216AQ8WUB2 273 aa14.34□□□□□ -0.11
CDC42BPB-208ENST00000561271 SGK3Q96BR1 496 aa14.34□□□□□ -0.11
CDC42BPB-208ENST00000561271 PGAM5Q96HS1 289 aa14.34□□□□□ -0.11
CDC42BPB-208ENST00000561271 OR10A2Q9H208 303 aa14.34□□□□□ -0.11
CDC42BPB-208ENST00000561271 PPP1R3EQ9H7J1 279 aa14.34□□□□□ -0.11
CDC42BPB-208ENST00000561271 NTN4Q9HB63 628 aa14.34□□□□□ -0.11
CDC42BPB-208ENST00000561271 TRAV40A0A0B4J280 105 aa14.33□□□□□ -0.12
CDC42BPB-208ENST00000561271 LGALS8O00214 317 aa14.33□□□□□ -0.12
CDC42BPB-208ENST00000561271 PHYHO14832 338 aa14.33□□□□□ -0.12
CDC42BPB-208ENST00000561271 GSC2O15499 205 aa14.33□□□□□ -0.12
CDC42BPB-208ENST00000561271 APOC1P02654 83 aa14.33□□□□□ -0.12
CDC42BPB-208ENST00000561271 IGHV4-38-2P0DP08 117 aa14.33□□□□□ -0.12
CDC42BPB-208ENST00000561271 EGR1P18146 543 aa14.33□□□□□ -0.12
CDC42BPB-208ENST00000561271 SLC2A5P22732 501 aa14.33□□□□□ -0.12
CDC42BPB-208ENST00000561271 CPT2P23786 658 aa14.33□□□□□ -0.12
CDC42BPB-208ENST00000561271 LRRN1Q6UXK5 716 aa14.33□□□□□ -0.12
CDC42BPB-208ENST00000561271 C12orf54Q6X4T0 127 aa14.33□□□□□ -0.12
CDC42BPB-208ENST00000561271 PARP8Q8N3A8 854 aa14.33□□□□□ -0.12
CDC42BPB-208ENST00000561271 SPERTQ8NA61 448 aa14.33□□□□□ -0.12
CDC42BPB-208ENST00000561271 OR52H1Q8NGJ2 320 aa14.33□□□□□ -0.12
CDC42BPB-208ENST00000561271 THEM6Q8WUY1 208 aa14.33□□□□□ -0.12
CDC42BPB-208ENST00000561271 RAB40AQ8WXH6 277 aa14.33□□□□□ -0.12
CDC42BPB-208ENST00000561271 TECTBQ96PL2 329 aa14.33□□□□□ -0.12
CDC42BPB-208ENST00000561271 NUDT16L1Q9BRJ7 211 aaKnown RBP14.33□□□□□ -0.12
CDC42BPB-208ENST00000561271 PAPOLGQ9BWT3 736 aaKnown RBP14.33□□□□□ -0.12
CDC42BPB-208ENST00000561271 PAPOLBQ9NRJ5 636 aaKnown RBP14.33□□□□□ -0.12
CDC42BPB-208ENST00000561271 DSCAML1Q8TD84 2053 aa14.33□□□□□ -0.12
CDC42BPB-208ENST00000561271 C22orf46C9J442 243 aa14.32□□□□□ -0.12
CDC42BPB-208ENST00000561271 MRPL3P09001 348 aaKnown RBP14.32□□□□□ -0.12
CDC42BPB-208ENST00000561271 DDOSTP39656 456 aa14.32□□□□□ -0.12
CDC42BPB-208ENST00000561271 PSMB10P40306 273 aa14.32□□□□□ -0.12
CDC42BPB-208ENST00000561271 GSK3AP49840 483 aa14.32□□□□□ -0.12
CDC42BPB-208ENST00000561271 PSMA6P60900 246 aaKnown RBP14.32□□□□□ -0.12
CDC42BPB-208ENST00000561271 UBA52P62987 128 aaKnown RBP14.32□□□□□ -0.12
CDC42BPB-208ENST00000561271 CSNK2BP67870 215 aa14.32□□□□□ -0.12
CDC42BPB-208ENST00000561271 APOFQ13790 326 aa14.32□□□□□ -0.12
CDC42BPB-208ENST00000561271 FAHD1Q6P587 224 aa14.32□□□□□ -0.12
CDC42BPB-208ENST00000561271 ZNF841Q6ZN19 808 aa14.32□□□□□ -0.12
CDC42BPB-208ENST00000561271 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.32□□□□□ -0.12
CDC42BPB-208ENST00000561271 GCSAMQ8N6F7 178 aa14.32□□□□□ -0.12
CDC42BPB-208ENST00000561271 ZNF454Q8N9F8 522 aa14.32□□□□□ -0.12
CDC42BPB-208ENST00000561271 PLPP7Q8NBV4 271 aa14.32□□□□□ -0.12
CDC42BPB-208ENST00000561271 ZNF48Q96MX3 618 aaPredicted RBP14.32□□□□□ -0.12
CDC42BPB-208ENST00000561271 DUX5Q96PT3 197 aa14.32□□□□□ -0.12
CDC42BPB-208ENST00000561271 SP140LQ9H930 580 aa14.32□□□□□ -0.12
CDC42BPB-208ENST00000561271 SMURF1Q9HCE7 757 aa14.32□□□□□ -0.12
CDC42BPB-208ENST00000561271 C14orf119Q9NWQ9 140 aa14.32□□□□□ -0.12
CDC42BPB-208ENST00000561271 IGHV3OR15-7A0A075B7D8 119 aa14.31□□□□□ -0.12
CDC42BPB-208ENST00000561271 OOEPA6NGQ2 149 aa14.31□□□□□ -0.12
CDC42BPB-208ENST00000561271 DNAJC9-AS1A6NH13 148 aa14.31□□□□□ -0.12
CDC42BPB-208ENST00000561271 M0R129 80 aa14.31□□□□□ -0.12
CDC42BPB-208ENST00000561271 ADAM20O43506 726 aa14.31□□□□□ -0.12
CDC42BPB-208ENST00000561271 CFL1P23528 166 aaKnown RBP14.31□□□□□ -0.12
CDC42BPB-208ENST00000561271 DAPP51397 102 aa14.31□□□□□ -0.12
CDC42BPB-208ENST00000561271 HCCSP53701 268 aa14.31□□□□□ -0.12
CDC42BPB-208ENST00000561271 CRISP1P54107 249 aa14.31□□□□□ -0.12
CDC42BPB-208ENST00000561271 MZT1Q08AG7 82 aa14.31□□□□□ -0.12
CDC42BPB-208ENST00000561271 BNIP1Q12981 228 aa14.31□□□□□ -0.12
CDC42BPB-208ENST00000561271 SNAPC1Q16533 368 aa14.31□□□□□ -0.12
CDC42BPB-208ENST00000561271 TUSC1Q2TAM9 212 aa14.31□□□□□ -0.12
CDC42BPB-208ENST00000561271 SLC35D3Q5M8T2 416 aa14.31□□□□□ -0.12
CDC42BPB-208ENST00000561271 RBMS3Q6XE24 437 aaKnown RBP14.31□□□□□ -0.12
CDC42BPB-208ENST00000561271 RHOUQ7L0Q8 258 aa14.31□□□□□ -0.12
CDC42BPB-208ENST00000561271 DOK3Q7L591 496 aa14.31□□□□□ -0.12
CDC42BPB-208ENST00000561271 FAM90A1Q86YD7 464 aa14.31□□□□□ -0.12
CDC42BPB-208ENST00000561271 OR8B12Q8NGG6 310 aa14.31□□□□□ -0.12
CDC42BPB-208ENST00000561271 LRRC29Q8WV35 223 aa14.31□□□□□ -0.12
CDC42BPB-208ENST00000561271 DNAJC9Q8WXX5 260 aa14.31□□□□□ -0.12
CDC42BPB-208ENST00000561271 GCDHQ92947 438 aaPredicted RBP14.31□□□□□ -0.12
CDC42BPB-208ENST00000561271 UTP4Q969X6 686 aaKnown RBP14.31□□□□□ -0.12
CDC42BPB-208ENST00000561271 UPRTQ96BW1 309 aa14.31□□□□□ -0.12
CDC42BPB-208ENST00000561271 NRBF2Q96F24 287 aa14.31□□□□□ -0.12
CDC42BPB-208ENST00000561271 TEX12Q9BXU0 123 aa14.31□□□□□ -0.12
CDC42BPB-208ENST00000561271 TTTY10Q9BZA0 68 aa14.31□□□□□ -0.12
CDC42BPB-208ENST00000561271 TVP23BQ9NYZ1 205 aa14.31□□□□□ -0.12
CDC42BPB-208ENST00000561271 RHBDD3Q9Y3P4 386 aa14.31□□□□□ -0.12
CDC42BPB-208ENST00000561271 LRP12Q9Y561 859 aa14.31□□□□□ -0.12
CDC42BPB-208ENST00000561271 SOX21Q9Y651 276 aaPredicted RBP14.31□□□□□ -0.12
CDC42BPB-208ENST00000561271 TRAV38-1A0A0B4J264 116 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms