RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 SLC7A10Q9NS82 523 aa4.45□□□□□ -1.7
RTF1-204ENST00000558117 ONECUT1Q9UBC0 465 aa4.45□□□□□ -1.7
RTF1-204ENST00000558117 ZNF490Q9ULM2 529 aaPredicted RBP4.45□□□□□ -1.7
RTF1-204ENST00000558117 SNX12Q9UMY4 172 aa4.45□□□□□ -1.7
RTF1-204ENST00000558117 SLC25A15Q9Y619 301 aa4.45□□□□□ -1.7
RTF1-204ENST00000558117 SAR1BQ9Y6B6 198 aa4.45□□□□□ -1.7
RTF1-204ENST00000558117 TRAV26-1A0A087WT03 109 aa4.44□□□□□ -1.7
RTF1-204ENST00000558117 IQCF5A8MTL0 148 aa4.44□□□□□ -1.7
RTF1-204ENST00000558117 ATP6V1G2-DDX39BF2Z307 99 aa4.44□□□□□ -1.7
RTF1-204ENST00000558117 M0R1B8 84 aa4.44□□□□□ -1.7
RTF1-204ENST00000558117 WRBO00258 174 aa4.44□□□□□ -1.7
RTF1-204ENST00000558117 MGRN1O60291 552 aa4.44□□□□□ -1.7
RTF1-204ENST00000558117 OR1I1O60431 355 aa4.44□□□□□ -1.7
RTF1-204ENST00000558117 CTNSO60931 367 aa4.44□□□□□ -1.7
RTF1-204ENST00000558117 UQCRC2P22695 453 aa4.44□□□□□ -1.7
RTF1-204ENST00000558117 GATA2P23769 480 aaPredicted RBP4.44□□□□□ -1.7
RTF1-204ENST00000558117 FNTAP49354 379 aa4.44□□□□□ -1.7
RTF1-204ENST00000558117 HADHBP55084 474 aaKnown RBP4.44□□□□□ -1.7
RTF1-204ENST00000558117 TMEM33P57088 247 aa4.44□□□□□ -1.7
RTF1-204ENST00000558117 CARD18P57730 90 aa4.44□□□□□ -1.7
RTF1-204ENST00000558117 RAB8AP61006 207 aa4.44□□□□□ -1.7
RTF1-204ENST00000558117 BTG1P62324 171 aa4.44□□□□□ -1.7
RTF1-204ENST00000558117 TGM3Q08188 693 aa4.44□□□□□ -1.7
RTF1-204ENST00000558117 SLAMF1Q13291 335 aa4.44□□□□□ -1.7
RTF1-204ENST00000558117 HEPACAMQ14CZ8 416 aa4.44□□□□□ -1.7
RTF1-204ENST00000558117 EBPQ15125 230 aaKnown RBP4.44□□□□□ -1.7
RTF1-204ENST00000558117 SSX2Q16385 188 aa4.44□□□□□ -1.7
RTF1-204ENST00000558117 ZNF239Q16600 458 aaKnown RBP4.44□□□□□ -1.7
RTF1-204ENST00000558117 DEFB112Q30KQ8 113 aa4.44□□□□□ -1.7
RTF1-204ENST00000558117 FAM106AQ4KMX7 169 aa4.44□□□□□ -1.7
RTF1-204ENST00000558117 FBXO48Q5FWF7 155 aa4.44□□□□□ -1.7
RTF1-204ENST00000558117 FGD3Q5JSP0 725 aa4.44□□□□□ -1.7
RTF1-204ENST00000558117 ZNF470Q6ECI4 717 aa4.44□□□□□ -1.7
RTF1-204ENST00000558117 DHRS11Q6UWP2 260 aa4.44□□□□□ -1.7
RTF1-204ENST00000558117 COX8CQ7Z4L0 72 aa4.44□□□□□ -1.7
RTF1-204ENST00000558117 WDFY1Q8IWB7 410 aa4.44□□□□□ -1.7
RTF1-204ENST00000558117 SYCE1Q8N0S2 351 aa4.44□□□□□ -1.7
RTF1-204ENST00000558117 TMEM86BQ8N661 226 aa4.44□□□□□ -1.7
RTF1-204ENST00000558117 SDR9C7Q8NEX9 313 aa4.44□□□□□ -1.7
RTF1-204ENST00000558117 OR6M1Q8NGM8 313 aa4.44□□□□□ -1.7
RTF1-204ENST00000558117 SPRYD4Q8WW59 207 aaPredicted RBP4.44□□□□□ -1.7
RTF1-204ENST00000558117 CXorf58Q96LI9 332 aa4.44□□□□□ -1.7
RTF1-204ENST00000558117 DOK1Q99704 481 aa4.44□□□□□ -1.7
RTF1-204ENST00000558117 NDUFAF3Q9BU61 184 aa4.44□□□□□ -1.7
RTF1-204ENST00000558117 CENPHQ9H3R5 247 aa4.44□□□□□ -1.7
RTF1-204ENST00000558117 EDA2RQ9HAV5 297 aa4.44□□□□□ -1.7
RTF1-204ENST00000558117 MRPL47Q9HD33 250 aaKnown RBP4.44□□□□□ -1.7
RTF1-204ENST00000558117 SLC17A7Q9P2U7 560 aa4.44□□□□□ -1.7
RTF1-204ENST00000558117 UVRAGQ9P2Y5 699 aa4.44□□□□□ -1.7
RTF1-204ENST00000558117 ZNF337Q9Y3M9 751 aa4.44□□□□□ -1.7
RTF1-204ENST00000558117 MUC2Q02817 5179 aa4.43□□□□□ -1.7
RTF1-204ENST00000558117 DOCK11Q5JSL3 2073 aa4.43□□□□□ -1.7
RTF1-204ENST00000558117 PPIAL4EA0A075B759 164 aa4.43□□□□□ -1.7
RTF1-204ENST00000558117 PPIAL4CA0A0B4J2A2 164 aa4.43□□□□□ -1.7
RTF1-204ENST00000558117 A0A1B0GVY2 172 aa4.43□□□□□ -1.7
RTF1-204ENST00000558117 K7EQD1 137 aa4.43□□□□□ -1.7
RTF1-204ENST00000558117 POLR3GO15318 223 aaPredicted RBP4.43□□□□□ -1.7
RTF1-204ENST00000558117 OR1F1O43749 312 aa4.43□□□□□ -1.7
RTF1-204ENST00000558117 AIFM1O95831 613 aa4.43□□□□□ -1.7
RTF1-204ENST00000558117 FGGP02679 453 aa4.43□□□□□ -1.7
RTF1-204ENST00000558117 ERCC1P07992 297 aaPredicted RBP4.43□□□□□ -1.7
RTF1-204ENST00000558117 OR4A8P0C604 315 aa4.43□□□□□ -1.7
RTF1-204ENST00000558117 PPIAL4FP0DN26 164 aa4.43□□□□□ -1.7
RTF1-204ENST00000558117 GGT1P19440 569 aa4.43□□□□□ -1.7
RTF1-204ENST00000558117 TMED10P49755 219 aaKnown RBP4.43□□□□□ -1.7
RTF1-204ENST00000558117 DYNLT1P63172 113 aa4.43□□□□□ -1.7
RTF1-204ENST00000558117 PAX8Q06710 450 aa4.43□□□□□ -1.7
RTF1-204ENST00000558117 P2RY14Q15391 338 aa4.43□□□□□ -1.7
RTF1-204ENST00000558117 WHAMMP3Q1A5X7 153 aa4.43□□□□□ -1.7
RTF1-204ENST00000558117 TEX44Q53QW1 395 aa4.43□□□□□ -1.7
RTF1-204ENST00000558117 LCE3CQ5T5A8 94 aa4.43□□□□□ -1.7
RTF1-204ENST00000558117 PRAMEF5Q5TYX0 476 aa4.43□□□□□ -1.7
RTF1-204ENST00000558117 GPR157Q5UAW9 335 aa4.43□□□□□ -1.7
RTF1-204ENST00000558117 PRAMEF6Q5VXH4 476 aa4.43□□□□□ -1.7
RTF1-204ENST00000558117 CARD17Q5XLA6 110 aa4.43□□□□□ -1.7
RTF1-204ENST00000558117 DGAT2L6Q6ZPD8 337 aa4.43□□□□□ -1.7
RTF1-204ENST00000558117 Q6ZT83 130 aa4.43□□□□□ -1.7
RTF1-204ENST00000558117 CENPUQ71F23 418 aa4.43□□□□□ -1.7
RTF1-204ENST00000558117 TRPM8Q7Z2W7 1104 aa4.43□□□□□ -1.7
RTF1-204ENST00000558117 PLCZ1Q86YW0 608 aa4.43□□□□□ -1.7
RTF1-204ENST00000558117 CCDC50Q8IVM0 306 aa4.43□□□□□ -1.7
RTF1-204ENST00000558117 SPAG16Q8N0X2 631 aa4.43□□□□□ -1.7
RTF1-204ENST00000558117 Q8N377 158 aa4.43□□□□□ -1.7
RTF1-204ENST00000558117 PQLC3Q8N755 202 aa4.43□□□□□ -1.7
RTF1-204ENST00000558117 UBL4BQ8N7F7 174 aa4.43□□□□□ -1.7
RTF1-204ENST00000558117 OR5D13Q8NGL4 314 aa4.43□□□□□ -1.7
RTF1-204ENST00000558117 FAM110BQ8TC76 370 aa4.43□□□□□ -1.7
RTF1-204ENST00000558117 NT5CQ8TCD5 201 aa4.43□□□□□ -1.7
RTF1-204ENST00000558117 DNAJA4Q8WW22 397 aaPredicted RBP4.43□□□□□ -1.7
RTF1-204ENST00000558117 C1orf54Q8WWF1 131 aa4.43□□□□□ -1.7
RTF1-204ENST00000558117 RASL10AQ92737 203 aa4.43□□□□□ -1.7
RTF1-204ENST00000558117 HAUS1Q96CS2 278 aa4.43□□□□□ -1.7
RTF1-204ENST00000558117 DNAJC1Q96KC8 554 aaKnown RBP4.43□□□□□ -1.7
RTF1-204ENST00000558117 VSTM2LQ96N03 204 aa4.43□□□□□ -1.7
RTF1-204ENST00000558117 SOSTQ9BQB4 213 aa4.43□□□□□ -1.7
RTF1-204ENST00000558117 OSBPL11Q9BXB4 747 aa4.43□□□□□ -1.7
RTF1-204ENST00000558117 AICDAQ9GZX7 198 aa4.43□□□□□ -1.7
RTF1-204ENST00000558117 RPS10P5Q9NQ39 176 aa4.43□□□□□ -1.7
RTF1-204ENST00000558117 ZNF275Q9NSD4 429 aaPredicted RBP4.43□□□□□ -1.7
RTF1-204ENST00000558117 SEC14L4Q9UDX3 406 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms