RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 HAAOP46952 286 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 RFX2P48378 723 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 PAX5Q02548 391 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 TSPAN31Q12999 210 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 TEX261Q6UWH6 196 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 ADAMTSL4Q6UY14 1074 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.25□□□□□ -1.41
SYNE2-216ENST00000555002 LSRQ86X29 649 aaPredicted RBP6.25□□□□□ -1.41
SYNE2-216ENST00000555002 RNF113BQ8IZP6 322 aaKnown RBP6.25□□□□□ -1.41
SYNE2-216ENST00000555002 TRAPPC1Q9Y5R8 145 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 NUP188Q5SRE5 1749 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 PRKNO60260 465 aaPredicted RBP6.25□□□□□ -1.41
SYNE2-216ENST00000555002 ACHEP22303 614 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 HOXD13P35453 343 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 LSM11P83369 360 aaKnown RBP eCLIP6.25□□□□□ -1.41
SYNE2-216ENST00000555002 DOLPP1Q86YN1 238 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 CIB3Q96Q77 187 aaPredicted RBP6.25□□□□□ -1.41
SYNE2-216ENST00000555002 DDOQ99489 341 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 PPIL1Q9Y3C6 166 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 HCFC2Q9Y5Z7 792 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 PTGESO14684 152 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 CYC1P08574 325 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 LIM2P55344 173 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 KIAA1024LP59773 190 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 FAM122BQ7Z309 247 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 SLAMF6Q96DU3 332 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 VAMP8Q9BV40 100 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 GLIPR2Q9H4G4 154 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 CLMPQ9H6B4 373 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 OR51B4Q9Y5P0 310 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 TMEM131LA2VDJ0 1609 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 ST8SIA5O15466 376 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 NME1P15531 152 aaKnown RBP6.25□□□□□ -1.41
SYNE2-216ENST00000555002 TAGLNQ01995 201 aaKnown RBP6.25□□□□□ -1.41
SYNE2-216ENST00000555002 TPBGQ13641 420 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 SLC25A26Q70HW3 274 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 CHCHD4Q8N4Q1 142 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 OR52I1Q8NGK6 324 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 OR5R1Q8NH85 324 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 SLC25A43Q8WUT9 341 aaPredicted RBP6.25□□□□□ -1.41
SYNE2-216ENST00000555002 OR4C12Q96R67 309 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 HDAC8Q9BY41 377 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 C20orf141Q9NUB4 165 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 OR5V1Q9UGF6 321 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 LIPGQ9Y5X9 500 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 NID2Q14112 1375 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 M0R135 149 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 TBX19O60806 448 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 FAM3AP98173 230 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 NAAAQ02083 359 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 FCN2Q15485 313 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 INPP5JQ15735 1006 aaPredicted RBP6.25□□□□□ -1.41
SYNE2-216ENST00000555002 SLC38A6Q8IZM9 456 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 UBTD2Q8WUN7 234 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 ZNF799Q96GE5 643 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 LHX3Q9UBR4 397 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 ANKRD34CP0C6C1 535 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 PPP1CAP62136 330 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 PDZK1IP1Q13113 114 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 MRPL43Q8N983 215 aaKnown RBP6.25□□□□□ -1.41
SYNE2-216ENST00000555002 C7orf43Q8WVR3 580 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 KIAA1324LA8MWY0 1029 aaPredicted RBP6.25□□□□□ -1.41
SYNE2-216ENST00000555002 GPX3P22352 226 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 RPL27P61353 136 aaKnown RBP6.25□□□□□ -1.41
SYNE2-216ENST00000555002 ZNF766Q5HY98 468 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 TMED6Q8WW62 240 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 PCOLCE2Q9UKZ9 415 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 LAMA4Q16363 1823 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 OR4C46A6NHA9 309 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 HPP00738 406 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 CRYABP02511 175 aaKnown RBP6.25□□□□□ -1.41
SYNE2-216ENST00000555002 HRH1P35367 487 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 SNRPNP63162 240 aaKnown RBP6.25□□□□□ -1.41
SYNE2-216ENST00000555002 ZNF154Q13106 437 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 SEH1LQ96EE3 360 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 ST8SIA3O43173 380 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 SLC35E2P0CK97 266 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 HTR1FP30939 366 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 OR2F1Q13607 317 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 B3GNTL1Q67FW5 361 aaPredicted RBP6.25□□□□□ -1.41
SYNE2-216ENST00000555002 SEZ6L2Q6UXD5 910 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 OR8A1Q8NGG7 326 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 GALMQ96C23 342 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 ADGRG7Q96K78 797 aa6.25□□□□□ -1.41
SYNE2-216ENST00000555002 ZNF346Q9UL40 294 aaKnown RBP6.25□□□□□ -1.41
SYNE2-216ENST00000555002 COX5AP20674 150 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 PIGPP57054 158 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 YPEL5P62699 121 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 SOWAHCQ53LP3 525 aaPredicted RBP6.24□□□□□ -1.41
SYNE2-216ENST00000555002 SCD5Q86SK9 330 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 OR1N2Q8NGR9 330 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 PELI1Q96FA3 418 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 ADAT1Q9BUB4 502 aaKnown RBP6.24□□□□□ -1.41
SYNE2-216ENST00000555002 SIRT5Q9NXA8 310 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 ZNF815PA8K554 130 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 ZNF354AO60765 605 aaPredicted RBP6.24□□□□□ -1.41
SYNE2-216ENST00000555002 S100A11P31949 105 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 PPP1CCP36873 323 aaKnown RBP6.24□□□□□ -1.41
SYNE2-216ENST00000555002 ETV1P50549 477 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 RPL30P62888 115 aaKnown RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms